RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 SLC4A4Q9Y6R1 1079 aa13.83□□□□□ -0.2
CTCFL-221ENST00000608903 SHTN1A0MZ66 631 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 EIF5BO60841 1220 aaKnown RBP13.82□□□□□ -0.2
CTCFL-221ENST00000608903 CYP21A2P08686 494 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 RHBDL3P58872 404 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 ADCK5Q3MIX3 580 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 UTRNP46939 3433 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 DICER1Q9UPY3 1922 aaKnown RBP13.82□□□□□ -0.2
CTCFL-221ENST00000608903 CDK5RAP2Q96SN8 1893 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 IGSF3O75054 1194 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 BTDP43251 543 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 GSTO1P78417 241 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 EVX2Q03828 476 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 APOBEC3HQ6NTF7 200 aaKnown RBP13.82□□□□□ -0.2
CTCFL-221ENST00000608903 IFNL3Q8IZI9 196 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 JDP2Q8WYK2 163 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 NBPF3Q9H094 633 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 TACC3Q9Y6A5 838 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 U3KPZ7 1027 aaPredicted RBP13.82□□□□□ -0.2
CTCFL-221ENST00000608903 ZNF541Q9H0D2 1346 aa13.82□□□□□ -0.2
CTCFL-221ENST00000608903 LDHCP07864 332 aa13.81□□□□□ -0.2
CTCFL-221ENST00000608903 CRKP46108 304 aa13.81□□□□□ -0.2
CTCFL-221ENST00000608903 ALX1Q15699 326 aa13.81□□□□□ -0.2
CTCFL-221ENST00000608903 CIAPIN1Q6FI81 312 aa13.81□□□□□ -0.2
CTCFL-221ENST00000608903 STOX1Q6ZVD7 989 aa13.81□□□□□ -0.2
CTCFL-221ENST00000608903 NKX2-3Q8TAU0 364 aa13.81□□□□□ -0.2
CTCFL-221ENST00000608903 LMNB1P20700 586 aa13.81□□□□□ -0.2
CTCFL-221ENST00000608903 TMED8Q6PL24 325 aaPredicted RBP13.81□□□□□ -0.2
CTCFL-221ENST00000608903 HHIPL2Q6UWX4 724 aa13.81□□□□□ -0.2
CTCFL-221ENST00000608903 MKRN1Q9UHC7 482 aaKnown RBP13.81□□□□□ -0.2
CTCFL-221ENST00000608903 BAZ2AQ9UIF9 1905 aaKnown RBP13.81□□□□□ -0.2
CTCFL-221ENST00000608903 APPP05067 770 aa13.8□□□□□ -0.2
CTCFL-221ENST00000608903 HAND2P61296 217 aa13.8□□□□□ -0.2
CTCFL-221ENST00000608903 MRIQ9BWK5 157 aa13.8□□□□□ -0.2
CTCFL-221ENST00000608903 CD2BP2O95400 341 aaKnown RBP13.79□□□□□ -0.2
CTCFL-221ENST00000608903 CPA1P15085 419 aa13.79□□□□□ -0.2
CTCFL-221ENST00000608903 INCENPQ9NQS7 918 aa13.79□□□□□ -0.2
CTCFL-221ENST00000608903 CYP2D7A0A087X1C5 515 aa13.79□□□□□ -0.2
CTCFL-221ENST00000608903 GNAT2P19087 354 aa13.79□□□□□ -0.2
CTCFL-221ENST00000608903 TSGA10IPQ3SY00 556 aa13.79□□□□□ -0.2
CTCFL-221ENST00000608903 CDC42EP5Q6NZY7 148 aa13.79□□□□□ -0.2
CTCFL-221ENST00000608903 TEKT1Q969V4 418 aa13.79□□□□□ -0.2
CTCFL-221ENST00000608903 ZDHHC15Q96MV8 337 aa13.79□□□□□ -0.2
CTCFL-221ENST00000608903 DCP1AQ9NPI6 582 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-221ENST00000608903 MCCP23508 829 aa13.78□□□□□ -0.2
CTCFL-221ENST00000608903 ANAPC15P60006 121 aa13.78□□□□□ -0.2
CTCFL-221ENST00000608903 HDLBPQ00341 1268 aaKnown RBP13.78□□□□□ -0.2
CTCFL-221ENST00000608903 GPR162Q16538 588 aa13.78□□□□□ -0.2
CTCFL-221ENST00000608903 TGFBRAP1Q8WUH2 860 aa13.78□□□□□ -0.2
CTCFL-221ENST00000608903 PRMT6Q96LA8 375 aaPredicted RBP13.78□□□□□ -0.2
CTCFL-221ENST00000608903 BAG3O95817 575 aa13.78□□□□□ -0.2
CTCFL-221ENST00000608903 CYP2D6P10635 497 aa13.78□□□□□ -0.2
CTCFL-221ENST00000608903 CFAP100Q494V2 611 aa13.78□□□□□ -0.2
CTCFL-221ENST00000608903 TBC1D10CQ8IV04 446 aa13.78□□□□□ -0.2
CTCFL-221ENST00000608903 SLF2Q8IX21 1173 aa13.78□□□□□ -0.2
CTCFL-221ENST00000608903 AGBL3Q8NEM8 1001 aa13.78□□□□□ -0.2
CTCFL-221ENST00000608903 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
CTCFL-221ENST00000608903 DDX4Q9NQI0 724 aaKnown RBP13.78□□□□□ -0.2
CTCFL-221ENST00000608903 SERPINA10Q9UK55 444 aa13.78□□□□□ -0.2
CTCFL-221ENST00000608903 WDHD1O75717 1129 aaPredicted RBP13.77□□□□□ -0.21
CTCFL-221ENST00000608903 ZMYM6O95789 1325 aa13.77□□□□□ -0.21
CTCFL-221ENST00000608903 EGFRP00533 1210 aa13.77□□□□□ -0.21
CTCFL-221ENST00000608903 CTDSPL2Q05D32 466 aa13.77□□□□□ -0.21
CTCFL-221ENST00000608903 LAMA4Q16363 1823 aa13.77□□□□□ -0.21
CTCFL-221ENST00000608903 C9orf131Q5VYM1 1079 aa13.77□□□□□ -0.21
CTCFL-221ENST00000608903 CTR9Q6PD62 1173 aa13.77□□□□□ -0.21
CTCFL-221ENST00000608903 MYO3BQ8WXR4 1341 aa13.77□□□□□ -0.21
CTCFL-221ENST00000608903 RPAP1Q9BWH6 1393 aaPredicted RBP13.77□□□□□ -0.21
CTCFL-221ENST00000608903 UPF3BQ9BZI7 483 aaKnown RBP13.77□□□□□ -0.21
CTCFL-221ENST00000608903 USP40Q9NVE5 1235 aa13.77□□□□□ -0.21
CTCFL-221ENST00000608903 RNF181Q9P0P0 153 aa13.77□□□□□ -0.21
CTCFL-221ENST00000608903 GJA3Q9Y6H8 435 aa13.77□□□□□ -0.21
CTCFL-221ENST00000608903 USP17L8P0C7I0 530 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 GMPSP49915 693 aaPredicted RBP13.76□□□□□ -0.21
CTCFL-221ENST00000608903 EIF6P56537 245 aaKnown RBP13.76□□□□□ -0.21
CTCFL-221ENST00000608903 TNIP1Q15025 636 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 MAPKAPK5Q8IW41 473 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 TEX11Q8IYF3 940 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 NAPBQ9H115 298 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 FOCADQ5VW36 1801 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 ECM29Q5VYK3 1845 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 USP17L12C9JPN9 530 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 USP17L21D6R901 530 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 E7EWF7 191 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 TDO2P48775 406 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 RBM5P52756 815 aaKnown RBP eCLIP13.76□□□□□ -0.21
CTCFL-221ENST00000608903 CACNB3P54284 484 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 NFIAQ12857 509 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 ZFPM1Q8IX07 1006 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 ZBED3Q96IU2 234 aaPredicted RBP13.76□□□□□ -0.21
CTCFL-221ENST00000608903 JAKMIP1Q96N16 626 aaKnown RBP13.76□□□□□ -0.21
CTCFL-221ENST00000608903 CTNNA3Q9UI47 895 aa13.76□□□□□ -0.21
CTCFL-221ENST00000608903 DDX60LQ5H9U9 1706 aaKnown RBP13.75□□□□□ -0.21
CTCFL-221ENST00000608903 TIAM2Q8IVF5 1701 aa13.75□□□□□ -0.21
CTCFL-221ENST00000608903 SLC4A8Q2Y0W8 1093 aa13.75□□□□□ -0.21
CTCFL-221ENST00000608903 GIMAP6Q6P9H5 292 aa13.75□□□□□ -0.21
CTCFL-221ENST00000608903 STK11IPQ8N1F8 1099 aa13.75□□□□□ -0.21
CTCFL-221ENST00000608903 TDRD3Q9H7E2 651 aaKnown RBP13.75□□□□□ -0.21
CTCFL-221ENST00000608903 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
CTCFL-221ENST00000608903 ATP8A2Q9NTI2 1148 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms