RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 FKBP1CQ5VVH2 108 aa17.29■□□□□ 0.36
CTSA-219ENST00000607841 ZSCAN25Q6NSZ9 544 aa17.29■□□□□ 0.36
CTSA-219ENST00000607841 MAGEB6Q8N7X4 407 aa17.29■□□□□ 0.36
CTSA-219ENST00000607841 PI4K2BQ8TCG2 481 aa17.29■□□□□ 0.36
CTSA-219ENST00000607841 DEFB129Q9H1M3 183 aa17.29■□□□□ 0.36
CTSA-219ENST00000607841 AOX1Q06278 1338 aa17.28■□□□□ 0.36
CTSA-219ENST00000607841 TRAF5O00463 557 aa17.28■□□□□ 0.36
CTSA-219ENST00000607841 HSPA6P17066 643 aa17.28■□□□□ 0.36
CTSA-219ENST00000607841 CYP7A1P22680 504 aa17.28■□□□□ 0.36
CTSA-219ENST00000607841 LRRFIP1Q32MZ4 808 aaKnown RBP17.28■□□□□ 0.36
CTSA-219ENST00000607841 SLC9C2Q5TAH2 1124 aa17.28■□□□□ 0.36
CTSA-219ENST00000607841 CDC42EP5Q6NZY7 148 aa17.28■□□□□ 0.36
CTSA-219ENST00000607841 CERS3Q8IU89 383 aa17.28■□□□□ 0.36
CTSA-219ENST00000607841 ZNF384Q8TF68 577 aa17.28■□□□□ 0.36
CTSA-219ENST00000607841 EDC3Q96F86 508 aaKnown RBP17.28■□□□□ 0.36
CTSA-219ENST00000607841 TCP10L2B9ZVM9 353 aa17.27■□□□□ 0.36
CTSA-219ENST00000607841 PLCG2P16885 1265 aa17.27■□□□□ 0.36
CTSA-219ENST00000607841 NF2P35240 595 aa17.27■□□□□ 0.36
CTSA-219ENST00000607841 FAM83AQ86UY5 434 aa17.27■□□□□ 0.36
CTSA-219ENST00000607841 CDCA5Q96FF9 252 aa17.27■□□□□ 0.36
CTSA-219ENST00000607841 OSBPL3Q9H4L5 887 aa17.27■□□□□ 0.36
CTSA-219ENST00000607841 AKAP11Q9UKA4 1901 aa17.26■□□□□ 0.35
CTSA-219ENST00000607841 TMEM88BA6NKF7 163 aa17.26■□□□□ 0.35
CTSA-219ENST00000607841 CELF2O95319 508 aaKnown RBP17.26■□□□□ 0.35
CTSA-219ENST00000607841 PPP4CP60510 307 aa17.26■□□□□ 0.35
CTSA-219ENST00000607841 RASA3Q14644 834 aa17.26■□□□□ 0.35
CTSA-219ENST00000607841 PLEKHM2Q8IWE5 1019 aa17.26■□□□□ 0.35
CTSA-219ENST00000607841 KBTBD3Q8NAB2 608 aa17.26■□□□□ 0.35
CTSA-219ENST00000607841 ZNF408Q9H9D4 720 aa17.26■□□□□ 0.35
CTSA-219ENST00000607841 SCAF8Q9UPN6 1271 aaKnown RBP17.26■□□□□ 0.35
CTSA-219ENST00000607841 PDE6AP16499 860 aa17.25■□□□□ 0.35
CTSA-219ENST00000607841 CACNB3P54284 484 aa17.25■□□□□ 0.35
CTSA-219ENST00000607841 HTRA3P83110 453 aa17.25■□□□□ 0.35
CTSA-219ENST00000607841 SUPT20HL1Q3ZLR7 823 aa17.25■□□□□ 0.35
CTSA-219ENST00000607841 IDI2Q9BXS1 227 aa17.25■□□□□ 0.35
CTSA-219ENST00000607841 AATFQ9NY61 560 aaKnown RBP eCLIP17.25■□□□□ 0.35
CTSA-219ENST00000607841 ZNF532Q9HCE3 1301 aa17.24■□□□□ 0.35
CTSA-219ENST00000607841 ZFYP08048 801 aaPredicted RBP17.24■□□□□ 0.35
CTSA-219ENST00000607841 ADD2P35612 726 aa17.24■□□□□ 0.35
CTSA-219ENST00000607841 FMR1Q06787 632 aaKnown RBP eCLIP17.24■□□□□ 0.35
CTSA-219ENST00000607841 UBE3CQ15386 1083 aa17.24■□□□□ 0.35
CTSA-219ENST00000607841 FAM151AQ8WW52 585 aa17.24■□□□□ 0.35
CTSA-219ENST00000607841 EVI5LQ96CN4 794 aa17.24■□□□□ 0.35
CTSA-219ENST00000607841 CREBZFQ9NS37 354 aa17.24■□□□□ 0.35
CTSA-219ENST00000607841 PPP4R2Q9NY27 417 aa17.24■□□□□ 0.35
CTSA-219ENST00000607841 ENTPD3O75355 529 aa17.23■□□□□ 0.35
CTSA-219ENST00000607841 RHBDL3P58872 404 aa17.23■□□□□ 0.35
CTSA-219ENST00000607841 PRAMEF18Q5VWM3 479 aa17.23■□□□□ 0.35
CTSA-219ENST00000607841 CST9Q5W186 159 aa17.23■□□□□ 0.35
CTSA-219ENST00000607841 DLK2Q6UY11 383 aa17.23■□□□□ 0.35
CTSA-219ENST00000607841 ADGRA1Q86SQ6 560 aa17.23■□□□□ 0.35
CTSA-219ENST00000607841 TEX11Q8IYF3 940 aa17.23■□□□□ 0.35
CTSA-219ENST00000607841 C2orf69Q8N8R5 385 aa17.23■□□□□ 0.35
CTSA-219ENST00000607841 HOOK2Q96ED9 719 aa17.23■□□□□ 0.35
CTSA-219ENST00000607841 MAGEB6P1A0A0J9YX57 407 aa17.22■□□□□ 0.35
CTSA-219ENST00000607841 TCRBV5S4A2TA0A5A2 114 aa17.22■□□□□ 0.35
CTSA-219ENST00000607841 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
CTSA-219ENST00000607841 FKBP1BP68106 108 aa17.22■□□□□ 0.35
CTSA-219ENST00000607841 NFIAQ12857 509 aa17.22■□□□□ 0.35
CTSA-219ENST00000607841 TICAM2Q86XR7 235 aa17.22■□□□□ 0.35
CTSA-219ENST00000607841 MIGA1Q8NAN2 632 aa17.22■□□□□ 0.35
CTSA-219ENST00000607841 FSD1Q9BTV5 496 aa17.22■□□□□ 0.35
CTSA-219ENST00000607841 TMEM39BQ9GZU3 492 aa17.22■□□□□ 0.35
CTSA-219ENST00000607841 GBA2Q9HCG7 927 aaPredicted RBP17.22■□□□□ 0.35
CTSA-219ENST00000607841 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
CTSA-219ENST00000607841 RNF113AO15541 343 aaKnown RBP17.21■□□□□ 0.35
CTSA-219ENST00000607841 WDHD1O75717 1129 aaPredicted RBP17.21■□□□□ 0.35
CTSA-219ENST00000607841 PDE4AP27815 886 aa17.21■□□□□ 0.35
CTSA-219ENST00000607841 RGS3P49796 1198 aa17.21■□□□□ 0.35
CTSA-219ENST00000607841 TCP10Q12799 353 aa17.21■□□□□ 0.35
CTSA-219ENST00000607841 SH3RF3Q8TEJ3 882 aaPredicted RBP17.21■□□□□ 0.35
CTSA-219ENST00000607841 FAM198AQ9UFP1 575 aa17.21■□□□□ 0.35
CTSA-219ENST00000607841 ABT1Q9ULW3 272 aaKnown RBP17.21■□□□□ 0.35
CTSA-219ENST00000607841 CEP350Q5VT06 3117 aa17.21■□□□□ 0.35
CTSA-219ENST00000607841 CNTNAP1P78357 1384 aa17.2■□□□□ 0.34
CTSA-219ENST00000607841 PPP1R12BO60237 982 aaPredicted RBP17.2■□□□□ 0.34
CTSA-219ENST00000607841 PICALMQ13492 652 aa17.2■□□□□ 0.34
CTSA-219ENST00000607841 NBPF12Q5TAG4 269 aaPredicted RBP17.2■□□□□ 0.34
CTSA-219ENST00000607841 TEPSINQ96N21 525 aa17.2■□□□□ 0.34
CTSA-219ENST00000607841 RPAP1Q9BWH6 1393 aaPredicted RBP17.19■□□□□ 0.34
CTSA-219ENST00000607841 USP5P45974 858 aa17.19■□□□□ 0.34
CTSA-219ENST00000607841 DYNLL1P63167 89 aaKnown RBP17.19■□□□□ 0.34
CTSA-219ENST00000607841 TTLL12Q14166 644 aaPredicted RBP17.19■□□□□ 0.34
CTSA-219ENST00000607841 ARMC9Q7Z3E5 817 aa17.19■□□□□ 0.34
CTSA-219ENST00000607841 ZSCAN29Q8IWY8 852 aaPredicted RBP17.19■□□□□ 0.34
CTSA-219ENST00000607841 TGFBRAP1Q8WUH2 860 aa17.19■□□□□ 0.34
CTSA-219ENST00000607841 APPBP2Q92624 585 aa17.19■□□□□ 0.34
CTSA-219ENST00000607841 RILPL2Q969X0 211 aa17.19■□□□□ 0.34
CTSA-219ENST00000607841 RIOK1Q9BRS2 568 aaKnown RBP17.19■□□□□ 0.34
CTSA-219ENST00000607841 TLL2Q9Y6L7 1015 aa17.19■□□□□ 0.34
CTSA-219ENST00000607841 MAST2Q6P0Q8 1798 aa17.19■□□□□ 0.34
CTSA-219ENST00000607841 RFX7Q2KHR2 1363 aa17.18■□□□□ 0.34
CTSA-219ENST00000607841 MYH2Q9UKX2 1941 aa17.18■□□□□ 0.34
CTSA-219ENST00000607841 DCAF15Q66K64 600 aa17.18■□□□□ 0.34
CTSA-219ENST00000607841 SAPCD2Q86UD0 394 aa17.18■□□□□ 0.34
CTSA-219ENST00000607841 AIDAQ96BJ3 306 aa17.18■□□□□ 0.34
CTSA-219ENST00000607841 CRNKL1Q9BZJ0 848 aaKnown RBP17.18■□□□□ 0.34
CTSA-219ENST00000607841 OSBPL5Q9H0X9 879 aaPredicted RBP17.18■□□□□ 0.34
CTSA-219ENST00000607841 DDX4Q9NQI0 724 aaKnown RBP17.18■□□□□ 0.34
CTSA-219ENST00000607841 ECM29Q5VYK3 1845 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms