RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 GOLPH3LQ9H4A5 285 aa18.58■□□□□ 0.57
CTSA-214ENST00000606788 ADCY5O95622 1261 aa18.58■□□□□ 0.56
CTSA-214ENST00000606788 MARCKSP29966 332 aaPredicted RBP18.58■□□□□ 0.56
CTSA-214ENST00000606788 HSPA1LP34931 641 aa18.58■□□□□ 0.56
CTSA-214ENST00000606788 SF3A1Q15459 793 aaKnown RBP18.58■□□□□ 0.56
CTSA-214ENST00000606788 APOA5Q6Q788 366 aa18.58■□□□□ 0.56
CTSA-214ENST00000606788 ZNF512BQ96KM6 892 aaPredicted RBP18.58■□□□□ 0.56
CTSA-214ENST00000606788 MTMR7Q9Y216 660 aa18.58■□□□□ 0.56
CTSA-214ENST00000606788 A0A1B0GVL5 298 aa18.58■□□□□ 0.56
CTSA-214ENST00000606788 GOLGA8AA7E2F4 631 aa18.58■□□□□ 0.56
CTSA-214ENST00000606788 AP5Z1O43299 807 aa18.58■□□□□ 0.56
CTSA-214ENST00000606788 PRDX5P30044 214 aa18.58■□□□□ 0.56
CTSA-214ENST00000606788 GNL2Q13823 731 aaKnown RBP18.58■□□□□ 0.56
CTSA-214ENST00000606788 CLEC4GQ6UXB4 293 aa18.58■□□□□ 0.56
CTSA-214ENST00000606788 LRRC4BQ9NT99 713 aa18.58■□□□□ 0.56
CTSA-214ENST00000606788 AATFQ9NY61 560 aaKnown RBP eCLIP18.58■□□□□ 0.56
CTSA-214ENST00000606788 ANKIB1Q9P2G1 1089 aa18.58■□□□□ 0.56
CTSA-214ENST00000606788 NARFQ9UHQ1 456 aa18.58■□□□□ 0.56
CTSA-214ENST00000606788 AFF2P51816 1311 aa18.57■□□□□ 0.56
CTSA-214ENST00000606788 BAZ2BQ9UIF8 2168 aaKnown RBP18.57■□□□□ 0.56
CTSA-214ENST00000606788 SH2B2O14492 632 aaPredicted RBP18.57■□□□□ 0.56
CTSA-214ENST00000606788 RPS6KA4O75676 772 aa18.57■□□□□ 0.56
CTSA-214ENST00000606788 AK7Q96M32 723 aa18.57■□□□□ 0.56
CTSA-214ENST00000606788 SLC26A6Q9BXS9 759 aa18.57■□□□□ 0.56
CTSA-214ENST00000606788 ZBTB43O43298 467 aa18.57■□□□□ 0.56
CTSA-214ENST00000606788 SEPT12Q8IYM1 358 aa18.57■□□□□ 0.56
CTSA-214ENST00000606788 C17orf53Q8N3J3 647 aaPredicted RBP18.57■□□□□ 0.56
CTSA-214ENST00000606788 ALG1Q9BT22 464 aa18.57■□□□□ 0.56
CTSA-214ENST00000606788 KIF3AQ9Y496 699 aa18.57■□□□□ 0.56
CTSA-214ENST00000606788 UTRNP46939 3433 aa18.57■□□□□ 0.56
CTSA-214ENST00000606788 SALL1Q9NSC2 1324 aa18.56■□□□□ 0.56
CTSA-214ENST00000606788 MAGEB6P1A0A0J9YX57 407 aa18.56■□□□□ 0.56
CTSA-214ENST00000606788 TYRO3Q06418 890 aa18.56■□□□□ 0.56
CTSA-214ENST00000606788 ANO6Q4KMQ2 910 aa18.56■□□□□ 0.56
CTSA-214ENST00000606788 DNAJC25Q9H1X3 360 aa18.56■□□□□ 0.56
CTSA-214ENST00000606788 ZSCAN16Q9H4T2 348 aaPredicted RBP18.56■□□□□ 0.56
CTSA-214ENST00000606788 CFAP45Q9UL16 551 aa18.56■□□□□ 0.56
CTSA-214ENST00000606788 CCDC69A6NI79 296 aa18.56■□□□□ 0.56
CTSA-214ENST00000606788 NFIXQ14938 502 aa18.56■□□□□ 0.56
CTSA-214ENST00000606788 TPTE2Q6XPS3 522 aa18.56■□□□□ 0.56
CTSA-214ENST00000606788 BSDC1Q9NW68 430 aaPredicted RBP18.56■□□□□ 0.56
CTSA-214ENST00000606788 SLC12A7Q9Y666 1083 aa18.56■□□□□ 0.56
CTSA-214ENST00000606788 RANBP6O60518 1105 aaKnown RBP18.55■□□□□ 0.56
CTSA-214ENST00000606788 GUCY1A2P33402 732 aa18.55■□□□□ 0.56
CTSA-214ENST00000606788 AKNAD1Q5T1N1 836 aa18.55■□□□□ 0.56
CTSA-214ENST00000606788 FSIP1Q8NA03 581 aa18.55■□□□□ 0.56
CTSA-214ENST00000606788 ZNF384Q8TF68 577 aa18.55■□□□□ 0.56
CTSA-214ENST00000606788 GJD4Q96KN9 370 aaPredicted RBP18.55■□□□□ 0.56
CTSA-214ENST00000606788 NACAP1Q9BZK3 213 aa18.55■□□□□ 0.56
CTSA-214ENST00000606788 TTC12Q9H892 705 aaPredicted RBP18.55■□□□□ 0.56
CTSA-214ENST00000606788 CCDC192P0DO97 292 aa18.55■□□□□ 0.56
CTSA-214ENST00000606788 STK38Q15208 465 aa18.55■□□□□ 0.56
CTSA-214ENST00000606788 NAA16Q6N069 864 aaPredicted RBP18.55■□□□□ 0.56
CTSA-214ENST00000606788 FNBP4Q8N3X1 1017 aaPredicted RBP18.55■□□□□ 0.56
CTSA-214ENST00000606788 IGDCC4Q8TDY8 1250 aa18.55■□□□□ 0.56
CTSA-214ENST00000606788 LY9Q9HBG7 655 aa18.55■□□□□ 0.56
CTSA-214ENST00000606788 GNL3LQ9NVN8 582 aaKnown RBP18.55■□□□□ 0.56
CTSA-214ENST00000606788 ISM2Q6H9L7 571 aa18.55■□□□□ 0.56
CTSA-214ENST00000606788 ZSCAN30Q86W11 494 aa18.55■□□□□ 0.56
CTSA-214ENST00000606788 WNK3Q9BYP7 1800 aa18.55■□□□□ 0.56
CTSA-214ENST00000606788 COL1A1P02452 1464 aaPredicted RBP18.54■□□□□ 0.56
CTSA-214ENST00000606788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.54■□□□□ 0.56
CTSA-214ENST00000606788 SF3B3Q15393 1217 aaKnown RBP18.54■□□□□ 0.56
CTSA-214ENST00000606788 TRAPPC3LQ5T215 181 aa18.54■□□□□ 0.56
CTSA-214ENST00000606788 PDLIM2Q96JY6 352 aa18.54■□□□□ 0.56
CTSA-214ENST00000606788 KCNJ14Q9UNX9 436 aa18.54■□□□□ 0.56
CTSA-214ENST00000606788 DHX16O60231 1041 aaKnown RBP18.54■□□□□ 0.56
CTSA-214ENST00000606788 CLCN1P35523 988 aa18.54■□□□□ 0.56
CTSA-214ENST00000606788 FBXO18Q8NFZ0 1043 aa18.54■□□□□ 0.56
CTSA-214ENST00000606788 FUCA2Q9BTY2 467 aa18.54■□□□□ 0.56
CTSA-214ENST00000606788 MRVI1Q9Y6F6 885 aa18.54■□□□□ 0.56
CTSA-214ENST00000606788 CYP2D6P10635 497 aa18.53■□□□□ 0.56
CTSA-214ENST00000606788 NMT2O60551 498 aa18.53■□□□□ 0.56
CTSA-214ENST00000606788 TRIM37O94972 964 aa18.53■□□□□ 0.56
CTSA-214ENST00000606788 MYH7P12883 1935 aa18.53■□□□□ 0.56
CTSA-214ENST00000606788 ELP1O95163 1332 aa18.53■□□□□ 0.56
CTSA-214ENST00000606788 PPARAQ07869 468 aa18.53■□□□□ 0.56
CTSA-214ENST00000606788 PCDHA7Q9UN72 937 aa18.53■□□□□ 0.56
CTSA-214ENST00000606788 BIN1O00499 593 aa18.52■□□□□ 0.56
CTSA-214ENST00000606788 IARSP41252 1262 aaKnown RBP18.52■□□□□ 0.56
CTSA-214ENST00000606788 FAM47AQ5JRC9 791 aa18.52■□□□□ 0.56
CTSA-214ENST00000606788 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.52■□□□□ 0.56
CTSA-214ENST00000606788 HIBADHP31937 336 aaKnown RBP18.52■□□□□ 0.55
CTSA-214ENST00000606788 SPECC1Q5M775 1068 aa18.52■□□□□ 0.55
CTSA-214ENST00000606788 SYNE3Q6ZMZ3 975 aa18.52■□□□□ 0.55
CTSA-214ENST00000606788 CNTNAP4Q9C0A0 1308 aa18.52■□□□□ 0.55
CTSA-214ENST00000606788 DDX60Q8IY21 1712 aaKnown RBP18.51■□□□□ 0.55
CTSA-214ENST00000606788 USP17L12C9JPN9 530 aa18.51■□□□□ 0.55
CTSA-214ENST00000606788 USP17L21D6R901 530 aa18.51■□□□□ 0.55
CTSA-214ENST00000606788 MECOMQ03112 1051 aa18.51■□□□□ 0.55
CTSA-214ENST00000606788 UBE4AQ14139 1066 aa18.51■□□□□ 0.55
CTSA-214ENST00000606788 WTAPQ15007 396 aa18.51■□□□□ 0.55
CTSA-214ENST00000606788 KRT40Q6A162 431 aa18.51■□□□□ 0.55
CTSA-214ENST00000606788 SASS6Q6UVJ0 657 aa18.51■□□□□ 0.55
CTSA-214ENST00000606788 CCDC73Q6ZRK6 1079 aa18.51■□□□□ 0.55
CTSA-214ENST00000606788 ZNF396Q96N95 335 aaPredicted RBP18.51■□□□□ 0.55
CTSA-214ENST00000606788 LETM1O95202 739 aaPredicted RBP18.51■□□□□ 0.55
CTSA-214ENST00000606788 DIXDC1Q155Q3 683 aa18.51■□□□□ 0.55
CTSA-214ENST00000606788 GRIK5Q16478 980 aa18.51■□□□□ 0.55
CTSA-214ENST00000606788 UBAC1Q9BSL1 405 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms