RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 LNPKQ9C0E8 428 aa17.35■□□□□ 0.37
CTSA-211ENST00000606066 MX1P20591 662 aa17.34■□□□□ 0.37
CTSA-211ENST00000606066 MAP3K12Q12852 859 aa17.34■□□□□ 0.37
CTSA-211ENST00000606066 DIXDC1Q155Q3 683 aa17.34■□□□□ 0.37
CTSA-211ENST00000606066 NSUN4Q96CB9 384 aaKnown RBP17.34■□□□□ 0.37
CTSA-211ENST00000606066 FAM163AQ96GL9 167 aaPredicted RBP17.34■□□□□ 0.37
CTSA-211ENST00000606066 ASTN2O75129 1339 aaPredicted RBP17.33■□□□□ 0.36
CTSA-211ENST00000606066 GOLIM4O00461 696 aa17.33■□□□□ 0.36
CTSA-211ENST00000606066 IDH1O75874 414 aaKnown RBP17.33■□□□□ 0.36
CTSA-211ENST00000606066 GLRX3O76003 335 aaKnown RBP17.33■□□□□ 0.36
CTSA-211ENST00000606066 NOGQ13253 232 aa17.33■□□□□ 0.36
CTSA-211ENST00000606066 ERICH6BQ5W0A0 696 aa17.33■□□□□ 0.36
CTSA-211ENST00000606066 NAA16Q6N069 864 aaPredicted RBP17.33■□□□□ 0.36
CTSA-211ENST00000606066 APOBEC3HQ6NTF7 200 aaKnown RBP17.33■□□□□ 0.36
CTSA-211ENST00000606066 USP48Q86UV5 1035 aa17.33■□□□□ 0.36
CTSA-211ENST00000606066 PIH1D3Q9NQM4 214 aaKnown RBP17.33■□□□□ 0.36
CTSA-211ENST00000606066 PAG1Q9NWQ8 432 aa17.33■□□□□ 0.36
CTSA-211ENST00000606066 TMOD2Q9NZR1 351 aa17.33■□□□□ 0.36
CTSA-211ENST00000606066 DAGLAQ9Y4D2 1042 aa17.33■□□□□ 0.36
CTSA-211ENST00000606066 PCDHAC2Q9Y5I4 1007 aa17.33■□□□□ 0.36
CTSA-211ENST00000606066 NDUFB9Q9Y6M9 179 aa17.33■□□□□ 0.36
CTSA-211ENST00000606066 GAKO14976 1311 aa17.32■□□□□ 0.36
CTSA-211ENST00000606066 CLRN2A0PK11 232 aa17.32■□□□□ 0.36
CTSA-211ENST00000606066 CCDC85CA6NKD9 419 aa17.32■□□□□ 0.36
CTSA-211ENST00000606066 SLC34A2O95436 690 aa17.32■□□□□ 0.36
CTSA-211ENST00000606066 MLLT1Q03111 559 aaPredicted RBP17.32■□□□□ 0.36
CTSA-211ENST00000606066 TNFAIP1Q13829 316 aa17.32■□□□□ 0.36
CTSA-211ENST00000606066 SPDYE2Q495Y8 402 aa17.32■□□□□ 0.36
CTSA-211ENST00000606066 NOL10Q9BSC4 688 aaKnown RBP17.32■□□□□ 0.36
CTSA-211ENST00000606066 ANTXR1Q9H6X2 564 aa17.32■□□□□ 0.36
CTSA-211ENST00000606066 TDRD3Q9H7E2 651 aaKnown RBP17.32■□□□□ 0.36
CTSA-211ENST00000606066 VEZTQ9HBM0 779 aa17.32■□□□□ 0.36
CTSA-211ENST00000606066 MROH7-TTC4A0A0A0MT08 1334 aa17.31■□□□□ 0.36
CTSA-211ENST00000606066 OTUD7AQ8TE49 926 aaPredicted RBP17.31■□□□□ 0.36
CTSA-211ENST00000606066 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.31■□□□□ 0.36
CTSA-211ENST00000606066 ZNF70Q9UC06 446 aaPredicted RBP17.31■□□□□ 0.36
CTSA-211ENST00000606066 STAP2Q9UGK3 403 aa17.31■□□□□ 0.36
CTSA-211ENST00000606066 TSKSQ9UJT2 592 aa17.31■□□□□ 0.36
CTSA-211ENST00000606066 SALL3Q9BXA9 1300 aa17.3■□□□□ 0.36
CTSA-211ENST00000606066 MYH13Q9UKX3 1938 aa17.3■□□□□ 0.36
CTSA-211ENST00000606066 GPR75-ASB3A0A0A6YYF3 556 aa17.3■□□□□ 0.36
CTSA-211ENST00000606066 BAG3O95817 575 aa17.3■□□□□ 0.36
CTSA-211ENST00000606066 MAP4K4O95819 1239 aaPredicted RBP17.3■□□□□ 0.36
CTSA-211ENST00000606066 TNNI2P48788 182 aa17.3■□□□□ 0.36
CTSA-211ENST00000606066 TSHZ3Q63HK5 1081 aa17.3■□□□□ 0.36
CTSA-211ENST00000606066 CENPQQ7L2Z9 268 aaPredicted RBP17.3■□□□□ 0.36
CTSA-211ENST00000606066 CCDC136Q96JN2 1154 aa17.3■□□□□ 0.36
CTSA-211ENST00000606066 USP40Q9NVE5 1235 aa17.3■□□□□ 0.36
CTSA-211ENST00000606066 PPP2R3BQ9Y5P8 575 aa17.3■□□□□ 0.36
CTSA-211ENST00000606066 ADM5C9JUS6 153 aa17.29■□□□□ 0.36
CTSA-211ENST00000606066 BTDP43251 543 aa17.29■□□□□ 0.36
CTSA-211ENST00000606066 PDE1AP54750 535 aa17.29■□□□□ 0.36
CTSA-211ENST00000606066 FKBP1CQ5VVH2 108 aa17.29■□□□□ 0.36
CTSA-211ENST00000606066 ZSCAN25Q6NSZ9 544 aa17.29■□□□□ 0.36
CTSA-211ENST00000606066 MAGEB6Q8N7X4 407 aa17.29■□□□□ 0.36
CTSA-211ENST00000606066 PI4K2BQ8TCG2 481 aa17.29■□□□□ 0.36
CTSA-211ENST00000606066 MCOLN1Q9GZU1 580 aa17.29■□□□□ 0.36
CTSA-211ENST00000606066 DEFB129Q9H1M3 183 aa17.29■□□□□ 0.36
CTSA-211ENST00000606066 ZNF408Q9H9D4 720 aa17.29■□□□□ 0.36
CTSA-211ENST00000606066 AOX1Q06278 1338 aa17.28■□□□□ 0.36
CTSA-211ENST00000606066 CYP7A1P22680 504 aa17.28■□□□□ 0.36
CTSA-211ENST00000606066 HUNKP57058 714 aa17.28■□□□□ 0.36
CTSA-211ENST00000606066 LRRFIP1Q32MZ4 808 aaKnown RBP17.28■□□□□ 0.36
CTSA-211ENST00000606066 SLC9C2Q5TAH2 1124 aa17.28■□□□□ 0.36
CTSA-211ENST00000606066 CDC42EP5Q6NZY7 148 aa17.28■□□□□ 0.36
CTSA-211ENST00000606066 CERS3Q8IU89 383 aa17.28■□□□□ 0.36
CTSA-211ENST00000606066 ZNF384Q8TF68 577 aa17.28■□□□□ 0.36
CTSA-211ENST00000606066 CCDC102AQ96A19 550 aa17.28■□□□□ 0.36
CTSA-211ENST00000606066 EDC3Q96F86 508 aaKnown RBP17.28■□□□□ 0.36
CTSA-211ENST00000606066 TCP10L2B9ZVM9 353 aa17.27■□□□□ 0.36
CTSA-211ENST00000606066 PLCG2P16885 1265 aa17.27■□□□□ 0.36
CTSA-211ENST00000606066 NF2P35240 595 aa17.27■□□□□ 0.36
CTSA-211ENST00000606066 RGMBQ6NW40 437 aa17.27■□□□□ 0.36
CTSA-211ENST00000606066 FAM83AQ86UY5 434 aa17.27■□□□□ 0.36
CTSA-211ENST00000606066 CDCA5Q96FF9 252 aa17.27■□□□□ 0.36
CTSA-211ENST00000606066 ZIC5Q96T25 663 aa17.27■□□□□ 0.36
CTSA-211ENST00000606066 OSBPL3Q9H4L5 887 aa17.27■□□□□ 0.36
CTSA-211ENST00000606066 THSD7BQ9C0I4 1608 aa17.27■□□□□ 0.36
CTSA-211ENST00000606066 AKAP11Q9UKA4 1901 aa17.26■□□□□ 0.35
CTSA-211ENST00000606066 FAM155AB1AL88 458 aaPredicted RBP17.26■□□□□ 0.35
CTSA-211ENST00000606066 PPP4CP60510 307 aa17.26■□□□□ 0.35
CTSA-211ENST00000606066 RASA3Q14644 834 aa17.26■□□□□ 0.35
CTSA-211ENST00000606066 PLEKHM2Q8IWE5 1019 aa17.26■□□□□ 0.35
CTSA-211ENST00000606066 C2orf69Q8N8R5 385 aa17.26■□□□□ 0.35
CTSA-211ENST00000606066 KBTBD3Q8NAB2 608 aa17.26■□□□□ 0.35
CTSA-211ENST00000606066 SCAF8Q9UPN6 1271 aaKnown RBP17.26■□□□□ 0.35
CTSA-211ENST00000606066 PDE6AP16499 860 aa17.25■□□□□ 0.35
CTSA-211ENST00000606066 CACNB3P54284 484 aa17.25■□□□□ 0.35
CTSA-211ENST00000606066 SUPT20HL1Q3ZLR7 823 aa17.25■□□□□ 0.35
CTSA-211ENST00000606066 IDI2Q9BXS1 227 aa17.25■□□□□ 0.35
CTSA-211ENST00000606066 GBA2Q9HCG7 927 aaPredicted RBP17.25■□□□□ 0.35
CTSA-211ENST00000606066 SAGE1Q9NXZ1 904 aa17.25■□□□□ 0.35
CTSA-211ENST00000606066 AATFQ9NY61 560 aaKnown RBP eCLIP17.25■□□□□ 0.35
CTSA-211ENST00000606066 ZNF532Q9HCE3 1301 aa17.24■□□□□ 0.35
CTSA-211ENST00000606066 ZFYP08048 801 aaPredicted RBP17.24■□□□□ 0.35
CTSA-211ENST00000606066 ADD2P35612 726 aa17.24■□□□□ 0.35
CTSA-211ENST00000606066 DGKZQ13574 1117 aa17.24■□□□□ 0.35
CTSA-211ENST00000606066 UBE3CQ15386 1083 aa17.24■□□□□ 0.35
CTSA-211ENST00000606066 DLK2Q6UY11 383 aa17.24■□□□□ 0.35
CTSA-211ENST00000606066 FAM151AQ8WW52 585 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 434.1 ms