RNA–Protein interactions for RNA: ENST00000605142.1

UBE3B-213, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-213ENST00000605142 MS4A4AQ96JQ5 239 aa15.03■□□□□ -0
UBE3B-213ENST00000605142 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.03■□□□□ -0
UBE3B-213ENST00000605142 H0YGN5 161 aa15.02■□□□□ -0
UBE3B-213ENST00000605142 FRAT2O75474 233 aaPredicted RBP15.02■□□□□ -0
UBE3B-213ENST00000605142 MS4A1P11836 297 aa15.02■□□□□ -0
UBE3B-213ENST00000605142 IL15P40933 162 aaPredicted RBP15.02■□□□□ -0
UBE3B-213ENST00000605142 MTX1Q13505 466 aa15.02■□□□□ -0
UBE3B-213ENST00000605142 TMEM39BQ9GZU3 492 aa15.02■□□□□ -0
UBE3B-213ENST00000605142 PRMT2P55345 433 aa15.01□□□□□ -0.01
UBE3B-213ENST00000605142 CHAF1AQ13111 956 aaPredicted RBP15.01□□□□□ -0.01
UBE3B-213ENST00000605142 SLC4A8Q2Y0W8 1093 aa15.01□□□□□ -0.01
UBE3B-213ENST00000605142 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.01□□□□□ -0.01
UBE3B-213ENST00000605142 ATG9AQ7Z3C6 839 aa15.01□□□□□ -0.01
UBE3B-213ENST00000605142 CNKSR2Q8WXI2 1034 aa15.01□□□□□ -0.01
UBE3B-213ENST00000605142 LPIN2Q92539 896 aa15.01□□□□□ -0.01
UBE3B-213ENST00000605142 ZFYVE28Q9HCC9 887 aa15.01□□□□□ -0.01
UBE3B-213ENST00000605142 ZCCHC17Q9NP64 241 aaKnown RBP15.01□□□□□ -0.01
UBE3B-213ENST00000605142 COPRSQ9NQ92 184 aa15.01□□□□□ -0.01
UBE3B-213ENST00000605142 CEP126Q9P2H0 1117 aa15.01□□□□□ -0.01
UBE3B-213ENST00000605142 PA2G4Q9UQ80 394 aaKnown RBP15.01□□□□□ -0.01
UBE3B-213ENST00000605142 PTCH2Q9Y6C5 1203 aa15.01□□□□□ -0.01
UBE3B-213ENST00000605142 TCP10L2B9ZVM9 353 aa15□□□□□ -0.01
UBE3B-213ENST00000605142 GTF2A2P52657 109 aa15□□□□□ -0.01
UBE3B-213ENST00000605142 CACNB3P54284 484 aa15□□□□□ -0.01
UBE3B-213ENST00000605142 TNFAIP1Q13829 316 aa15□□□□□ -0.01
UBE3B-213ENST00000605142 ATP2B3Q16720 1220 aa15□□□□□ -0.01
UBE3B-213ENST00000605142 RCAN3Q9UKA8 241 aa15□□□□□ -0.01
UBE3B-213ENST00000605142 WDHD1O75717 1129 aaPredicted RBP14.99□□□□□ -0.01
UBE3B-213ENST00000605142 RLBP1P12271 317 aa14.99□□□□□ -0.01
UBE3B-213ENST00000605142 APOBEC3HQ6NTF7 200 aaKnown RBP14.99□□□□□ -0.01
UBE3B-213ENST00000605142 OPTNQ96CV9 577 aa14.99□□□□□ -0.01
UBE3B-213ENST00000605142 ELP3Q9H9T3 547 aa14.99□□□□□ -0.01
UBE3B-213ENST00000605142 HDLBPQ00341 1268 aaKnown RBP14.98□□□□□ -0.01
UBE3B-213ENST00000605142 TAF1CQ15572 869 aaPredicted RBP14.98□□□□□ -0.01
UBE3B-213ENST00000605142 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.98□□□□□ -0.01
UBE3B-213ENST00000605142 NKX2-3Q8TAU0 364 aa14.98□□□□□ -0.01
UBE3B-213ENST00000605142 TBC1D22AQ8WUA7 517 aa14.98□□□□□ -0.01
UBE3B-213ENST00000605142 BRI3BPQ8WY22 251 aa14.98□□□□□ -0.01
UBE3B-213ENST00000605142 KIF22Q14807 665 aa14.97□□□□□ -0.01
UBE3B-213ENST00000605142 CHRDL2Q6WN34 429 aa14.97□□□□□ -0.01
UBE3B-213ENST00000605142 PANK1Q8TE04 598 aa14.97□□□□□ -0.01
UBE3B-213ENST00000605142 ZDHHC15Q96MV8 337 aa14.97□□□□□ -0.01
UBE3B-213ENST00000605142 PRO3102Q9H379 93 aa14.97□□□□□ -0.01
UBE3B-213ENST00000605142 C1orf115Q9H7X2 142 aa14.97□□□□□ -0.01
UBE3B-213ENST00000605142 GNL3LQ9NVN8 582 aaKnown RBP14.97□□□□□ -0.01
UBE3B-213ENST00000605142 CCL15-CCL14A0A0B4J2E2 113 aa14.96□□□□□ -0.01
UBE3B-213ENST00000605142 PNMA6EA0A0J9YXQ4 647 aa14.96□□□□□ -0.01
UBE3B-213ENST00000605142 A0A1W2PPC1 479 aa14.96□□□□□ -0.01
UBE3B-213ENST00000605142 DLL1O00548 723 aa14.96□□□□□ -0.01
UBE3B-213ENST00000605142 TLR2O60603 784 aa14.96□□□□□ -0.01
UBE3B-213ENST00000605142 MAP3K9P80192 1104 aa14.96□□□□□ -0.01
UBE3B-213ENST00000605142 VGLL4Q14135 290 aa14.96□□□□□ -0.01
UBE3B-213ENST00000605142 CCL15Q16663 113 aa14.96□□□□□ -0.01
UBE3B-213ENST00000605142 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.96□□□□□ -0.01
UBE3B-213ENST00000605142 TEKT1Q969V4 418 aa14.96□□□□□ -0.01
UBE3B-213ENST00000605142 MRIQ9BWK5 157 aa14.96□□□□□ -0.01
UBE3B-213ENST00000605142 RBM27Q9P2N5 1060 aaKnown RBP14.96□□□□□ -0.01
UBE3B-213ENST00000605142 AKAP2Q9Y2D5 859 aa14.96□□□□□ -0.01
UBE3B-213ENST00000605142 MAST3O60307 1309 aa14.95□□□□□ -0.02
UBE3B-213ENST00000605142 COL6A3P12111 3177 aa14.95□□□□□ -0.02
UBE3B-213ENST00000605142 LACTBP83111 547 aaPredicted RBP14.95□□□□□ -0.02
UBE3B-213ENST00000605142 G3BP1Q13283 466 aaKnown RBP eCLIP14.95□□□□□ -0.02
UBE3B-213ENST00000605142 OS9Q13438 667 aaPredicted RBP14.95□□□□□ -0.02
UBE3B-213ENST00000605142 FAM43AQ8N2R8 423 aa14.95□□□□□ -0.02
UBE3B-213ENST00000605142 SNCAIPQ9Y6H5 919 aa14.95□□□□□ -0.02
UBE3B-213ENST00000605142 ZSWIM8A7E2V4 1837 aa14.94□□□□□ -0.02
UBE3B-213ENST00000605142 CAPN2P17655 700 aa14.94□□□□□ -0.02
UBE3B-213ENST00000605142 TFCP2Q12800 502 aa14.94□□□□□ -0.02
UBE3B-213ENST00000605142 MVPQ14764 893 aaKnown RBP14.94□□□□□ -0.02
UBE3B-213ENST00000605142 UBE2Q1Q7Z7E8 422 aa14.94□□□□□ -0.02
UBE3B-213ENST00000605142 SLC17A8Q8NDX2 589 aa14.94□□□□□ -0.02
UBE3B-213ENST00000605142 HTATIP2Q9BUP3 242 aa14.94□□□□□ -0.02
UBE3B-213ENST00000605142 DDX19BQ9UMR2 479 aa14.94□□□□□ -0.02
UBE3B-213ENST00000605142 SUGT1Q9Y2Z0 365 aa14.94□□□□□ -0.02
UBE3B-213ENST00000605142 SPDYE5A6NIY4 337 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 SEMA3EO15041 775 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 ZBTB7BO15156 539 aaPredicted RBP14.93□□□□□ -0.02
UBE3B-213ENST00000605142 CETPP11597 493 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 PRDX5P30044 214 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 DIXDC1Q155Q3 683 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 FKBP1CQ5VVH2 108 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 HHIPL2Q6UWX4 724 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 FAM83AQ86UY5 434 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 WDR66Q8TBY9 1149 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 SSH3Q8TE77 659 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 SH3TC2Q8TF17 1288 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 SHISA4Q96DD7 197 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 CHMP4BQ9H444 224 aaKnown RBP14.93□□□□□ -0.02
UBE3B-213ENST00000605142 DAGLAQ9Y4D2 1042 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 NR2E3Q9Y5X4 410 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 CSADQ9Y600 493 aa14.93□□□□□ -0.02
UBE3B-213ENST00000605142 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.93□□□□□ -0.02
UBE3B-213ENST00000605142 A0A1B0GUL7 405 aa14.92□□□□□ -0.02
UBE3B-213ENST00000605142 ADORA1P30542 326 aa14.92□□□□□ -0.02
UBE3B-213ENST00000605142 PHKA1P46020 1223 aa14.92□□□□□ -0.02
UBE3B-213ENST00000605142 GJA8P48165 433 aa14.92□□□□□ -0.02
UBE3B-213ENST00000605142 TNNI2P48788 182 aa14.92□□□□□ -0.02
UBE3B-213ENST00000605142 ATP8B2P98198 1209 aa14.92□□□□□ -0.02
UBE3B-213ENST00000605142 NFIAQ12857 509 aa14.92□□□□□ -0.02
UBE3B-213ENST00000605142 POLA2Q14181 598 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms