RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 TMEM130Q8N3G9 435 aa5.4□□□□□ -1.54
IGHV3-29-201ENST00000604817 NIF3L1Q9GZT8 377 aa5.4□□□□□ -1.54
IGHV3-29-201ENST00000604817 AK5Q9Y6K8 562 aa5.4□□□□□ -1.54
IGHV3-29-201ENST00000604817 ADCY10Q96PN6 1610 aa5.4□□□□□ -1.55
IGHV3-29-201ENST00000604817 WRNQ14191 1432 aaPredicted RBP eCLIP5.4□□□□□ -1.55
IGHV3-29-201ENST00000604817 ADAMTS12P58397 1594 aa5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 PNMA6FA0A0J9YX94 578 aa5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 ZBTB42B2RXF5 422 aa5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 TPD52L2O43399 206 aaKnown RBP5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 DEAF1O75398 565 aaPredicted RBP5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 EGFRP00533 1210 aa5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 XRCC5P13010 732 aaKnown RBP5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 ANAPC15P60006 121 aa5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 SERINC3Q13530 473 aa5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 NFE2L2Q16236 605 aa5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 USP48Q86UV5 1035 aa5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 VPS37DQ86XT2 251 aa5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 CACTIN-AS1Q8N1I8 211 aa5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 ZCRB1Q8TBF4 217 aaKnown RBP5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 SNX29Q8TEQ0 813 aa5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 SMG9Q9H0W8 520 aaKnown RBP5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 RTCBQ9Y3I0 505 aaKnown RBP5.39□□□□□ -1.55
IGHV3-29-201ENST00000604817 ERICH3Q5RHP9 1530 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 UBAP1LF5GYI3 381 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 ENPP3O14638 875 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 CPNE3O75131 537 aaKnown RBP5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 CLSTN1O94985 981 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 MAP4K4O95819 1239 aaPredicted RBP5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 ATF4P18848 351 aaPredicted RBP5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 GRNP28799 593 aaKnown RBP5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 GJA8P48165 433 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 RNF187Q5TA31 235 aaPredicted RBP5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 KRT25Q7Z3Z0 450 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 ZNF438Q7Z4V0 828 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 PMEPA1Q969W9 287 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 CRELD1Q96HD1 420 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 CSRNP1Q96S65 589 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 RBSNQ9H1K0 784 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 MYH16Q9H6N6 1097 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 PCDH12Q9NPG4 1184 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 IFT57Q9NWB7 429 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 ZFATQ9P243 1243 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 COL4A3BPQ9Y5P4 624 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 KCNMB2Q9Y691 235 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 LMTK3Q96Q04 1460 aa5.38□□□□□ -1.55
IGHV3-29-201ENST00000604817 F8W735 103 aaPredicted RBP5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 EIF1AYO14602 144 aaKnown RBP5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 TNFRSF21O75509 655 aa5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 EIF2AK2P19525 551 aaKnown RBP5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 TARSP26639 723 aaKnown RBP5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 CD97P48960 835 aa5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 IRAK1P51617 712 aa5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 MLLT1Q03111 559 aaPredicted RBP5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 FILIP1Q7Z7B0 1213 aa5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 RPUSD2Q8IZ73 545 aaKnown RBP5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 CMTR1Q8N1G2 835 aaKnown RBP5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 ZNF526Q8TF50 670 aaPredicted RBP5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 UBE2Q2Q8WVN8 375 aa5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 MKL1Q969V6 931 aa5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 MRFAP1L1Q96HT8 127 aa5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 FMNL2Q96PY5 1086 aa5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 MUC3BQ9H195 1237 aa5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 GGNBP2Q9H3C7 697 aa5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 TLR7Q9NYK1 1049 aaKnown RBP5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 CHPF2Q9P2E5 772 aa5.37□□□□□ -1.55
IGHV3-29-201ENST00000604817 GIPC1O14908 333 aa5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 XYLBO75191 536 aa5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 SASH3O75995 380 aa5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 HOXD8P13378 290 aaPredicted RBP5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 YBX3P16989 372 aaKnown RBP eCLIP5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 TRIP4Q15650 581 aaPredicted RBP5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 PLEKHG6Q3KR16 790 aa5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 Q6ZS46 218 aa5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 NLRP13Q86W25 1043 aa5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 PLD4Q96BZ4 506 aa5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 ELP3Q9H9T3 547 aa5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 PRDM16Q9HAZ2 1276 aa5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 SPG7Q9UQ90 795 aa5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 FAN1Q9Y2M0 1017 aa5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 PTPRGP23470 1445 aa5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 PLB1Q6P1J6 1458 aa5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 GLI2P10070 1586 aa5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 PPRC1Q5VV67 1664 aaKnown RBP5.36□□□□□ -1.55
IGHV3-29-201ENST00000604817 TOP2BQ02880 1626 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 ASXL2Q76L83 1435 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 USP31Q70CQ4 1352 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 COBLO75128 1261 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 PHACTR2O75167 634 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 GHRHP01286 108 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 PSAPP07602 524 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 SSTR4P31391 388 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 SOX18P35713 384 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 PLAURQ03405 335 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 PAK2Q13177 524 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 HS2ST1Q7LGA3 356 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 EXOC8Q8IYI6 725 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 RNPC3Q96LT9 517 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms