RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.47□□□□□ -1.53
LINC01109-201ENST00000603837 USTQ9Y2C2 406 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 TSPOAP1O95153 1857 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 SMTNL1A8MU46 457 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 CSPG5O95196 566 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 BAG4O95429 457 aaKnown RBP5.47□□□□□ -1.53
LINC01109-201ENST00000603837 F12P00748 615 aaPredicted RBP5.47□□□□□ -1.53
LINC01109-201ENST00000603837 TSPY4P0CV99 314 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 TSPY10P0CW01 314 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 CLK1P49759 484 aaKnown RBP5.47□□□□□ -1.53
LINC01109-201ENST00000603837 AMPD3Q01432 767 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 SLC7A5Q01650 507 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 SLFNL1Q499Z3 407 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 NAIF1Q69YI7 327 aaPredicted RBP5.47□□□□□ -1.53
LINC01109-201ENST00000603837 PTCRAQ6ISU1 281 aaPredicted RBP5.47□□□□□ -1.53
LINC01109-201ENST00000603837 IQCF2Q8IXL9 164 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 STK11IPQ8N1F8 1099 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 PRPF38AQ8NAV1 312 aaKnown RBP5.47□□□□□ -1.53
LINC01109-201ENST00000603837 NEK9Q8TD19 979 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 PRKD2Q9BZL6 878 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 GPATCH8Q9UKJ3 1502 aaKnown RBP5.47□□□□□ -1.53
LINC01109-201ENST00000603837 TPM1P09493 284 aa5.46□□□□□ -1.53
LINC01109-201ENST00000603837 CCDC175P0C221 793 aa5.46□□□□□ -1.53
LINC01109-201ENST00000603837 NBPF7P0C2Y1 421 aaPredicted RBP5.46□□□□□ -1.53
LINC01109-201ENST00000603837 SRGNP10124 158 aa5.46□□□□□ -1.53
LINC01109-201ENST00000603837 SLC19A1P41440 591 aa5.46□□□□□ -1.53
LINC01109-201ENST00000603837 NFX1Q12986 1120 aaKnown RBP5.46□□□□□ -1.53
LINC01109-201ENST00000603837 CFAP70Q5T0N1 1121 aa5.46□□□□□ -1.53
LINC01109-201ENST00000603837 AP1ARQ63HQ0 302 aa5.46□□□□□ -1.53
LINC01109-201ENST00000603837 ELOA2Q8IYF1 753 aaPredicted RBP5.46□□□□□ -1.53
LINC01109-201ENST00000603837 IPCEF1Q8WWN9 437 aaPredicted RBP5.46□□□□□ -1.53
LINC01109-201ENST00000603837 PPM1EQ8WY54 764 aa5.46□□□□□ -1.53
LINC01109-201ENST00000603837 NELL2Q99435 816 aa5.46□□□□□ -1.53
LINC01109-201ENST00000603837 HMX1Q9NP08 348 aaPredicted RBP5.46□□□□□ -1.53
LINC01109-201ENST00000603837 PICK1Q9NRD5 415 aa5.46□□□□□ -1.53
LINC01109-201ENST00000603837 ETAA1Q9NY74 926 aa5.46□□□□□ -1.53
LINC01109-201ENST00000603837 ABCF2Q9UG63 623 aa5.46□□□□□ -1.53
LINC01109-201ENST00000603837 RTEL1-TNFRSF6BF6WH68 1400 aa5.46□□□□□ -1.53
LINC01109-201ENST00000603837 RALGAPBQ86X10 1494 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 KIF7Q2M1P5 1343 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 ARHGAP31Q2M1Z3 1444 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 BICDL2A1A5D9 508 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 TPM4P67936 248 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 RBM6P78332 1123 aaKnown RBP5.46□□□□□ -1.54
LINC01109-201ENST00000603837 PTK7Q13308 1070 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 NAA30Q147X3 362 aaPredicted RBP5.46□□□□□ -1.54
LINC01109-201ENST00000603837 GPT2Q8TD30 523 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 SLC39A13Q96H72 371 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 UNC93B1Q9H1C4 597 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 SUN2Q9UH99 717 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 KANK1Q14678 1352 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 FANCAO15360 1455 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 CAMSAP2Q08AD1 1489 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 NEBLO76041 1014 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 SMC2O95347 1197 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 NUCB2P80303 420 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 NR6A1Q15406 480 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 FKBP15Q5T1M5 1219 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 MCTP1Q6DN14 999 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 PPP4R4Q6NUP7 873 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 CCDC174Q6PII3 467 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 LIAT1Q6ZQX7 453 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 CLEC17AQ6ZS10 378 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 UBE2Q1Q7Z7E8 422 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 DZIP3Q86Y13 1208 aaKnown RBP5.46□□□□□ -1.54
LINC01109-201ENST00000603837 FBXO18Q8NFZ0 1043 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 GOLGA5Q8TBA6 731 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 GTF3C6Q969F1 213 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 ERP27Q96DN0 273 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 TBC1D31Q96DN5 1066 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 TMEM87BQ96K49 555 aa5.46□□□□□ -1.54
LINC01109-201ENST00000603837 MAST1Q9Y2H9 1570 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 POGZQ7Z3K3 1410 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 ATG7O95352 703 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 EIF5P55010 431 aaKnown RBP5.45□□□□□ -1.54
LINC01109-201ENST00000603837 SAPCD2Q86UD0 394 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 CCDC112Q8NEF3 446 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 FAM126AQ9BYI3 521 aaPredicted RBP5.45□□□□□ -1.54
LINC01109-201ENST00000603837 TBK1Q9UHD2 729 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 MYO5CQ9NQX4 1742 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 TRPM1Q7Z4N2 1603 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 SYCE3A1L190 88 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 CD2BP2O95400 341 aaKnown RBP5.45□□□□□ -1.54
LINC01109-201ENST00000603837 GNALP38405 381 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 TRIM32Q13049 653 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 MCM10Q7L590 875 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 KLHL23Q8NBE8 558 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 KIAA1524Q8TCG1 905 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 EMID1Q96A84 441 aaPredicted RBP5.45□□□□□ -1.54
LINC01109-201ENST00000603837 CPSF2Q9P2I0 782 aaKnown RBP5.45□□□□□ -1.54
LINC01109-201ENST00000603837 N6AMT1Q9Y5N5 214 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 EID1Q9Y6B2 187 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 V9GY48 417 aaPredicted RBP5.45□□□□□ -1.54
LINC01109-201ENST00000603837 EIF3AQ14152 1382 aaKnown RBP5.45□□□□□ -1.54
LINC01109-201ENST00000603837 ZMYM3Q14202 1370 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 LMTK3Q96Q04 1460 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 UNC13BO14795 1591 aa5.45□□□□□ -1.54
LINC01109-201ENST00000603837 SPAG9O60271 1321 aaKnown RBP5.45□□□□□ -1.54
LINC01109-201ENST00000603837 TRAPPC10P48553 1259 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 RPIAP49247 311 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms