RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 RAPGEF6Q8TEU7 1601 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 KIF27Q86VH2 1401 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 KIF3BO15066 747 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 ATP9BO43861 1147 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 RPN1P04843 607 aaKnown RBP5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 POU3F3P20264 500 aaPredicted RBP5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 GUCY2CP25092 1073 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 CASQ1P31415 396 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 TNNT3P45378 269 aaPredicted RBP5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 SERINC3Q13530 473 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 BECN1Q14457 450 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 ZNF449Q6P9G9 518 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 MAATS1Q7Z4T9 603 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 MYO1HQ8N1T3 1032 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 SLC4A5Q9BY07 1137 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 DCTN4Q9UJW0 460 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 KLHL33A6NCF5 533 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 PABPN1LA6NDY0 278 aaKnown RBP5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 EXOSC10Q01780 885 aaKnown RBP5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 ATP2B3Q16720 1220 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 JAKMIP3Q5VZ66 844 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 PPP1R9BQ96SB3 815 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 CNTN3Q9P232 1028 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 ATP8A1Q9Y2Q0 1164 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 MLH3Q9UHC1 1453 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 RAB3GAP2Q9H2M9 1393 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 A6NJY4 79 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 GOLGA6L6A8MZA4 724 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 MPHOSPH10O00566 681 aaKnown RBP5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 SNX2O60749 519 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 HOXC13P31276 330 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 NOS2P35228 1153 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 PPP2R5CQ13362 524 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 TTC8Q8TAM2 541 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 SKA1Q96BD8 255 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 FEZ1Q99689 392 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 PAIP2Q9BPZ3 127 aaKnown RBP5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 ZNF408Q9H9D4 720 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 RABL2AQ9UBK7 228 aaPredicted RBP5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 NEURL4Q96JN8 1562 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 ABCC3O15438 1527 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 KDM5DQ9BY66 1539 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 SPHKAPQ2M3C7 1700 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 TK2O00142 265 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 CNGA1P29973 690 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 SPICE1Q8N0Z3 855 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 ZNF594Q96JF6 807 aaPredicted RBP5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 TBK1Q9UHD2 729 aa5.88□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L15C9J2P7 530 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L10C9JJH3 530 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L13C9JLJ4 530 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L12C9JPN9 530 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L11C9JVI0 530 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L21D6R901 530 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L18D6R9N7 530 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L22D6RA61 530 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L17D6RBQ6 530 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L19D6RCP7 530 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L20D6RJB6 530 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 ACTN4O43707 911 aaKnown RBP5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 SORBS3O60504 671 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 DIAPH1O60610 1272 aaKnown RBP5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 KATNA1O75449 491 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 FOSL1P15407 271 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 MCL1Q07820 350 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L24Q0WX57 530 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 TMC7Q7Z402 723 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 CCDC24Q8N4L8 307 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 MTRQ99707 1265 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 PRM3Q9NNZ6 103 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 MKS1Q9NXB0 559 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 SAGE1Q9NXZ1 904 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 TSR3Q9UJK0 312 aaKnown RBP5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 KNSTRNQ9Y448 316 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 PRKAB1Q9Y478 270 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 PCDHGB3Q9Y5G1 929 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 SMG6Q86US8 1419 aaKnown RBP5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 ITSN2Q9NZM3 1697 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 TSPY2A6NKD2 308 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 TSPY3P0CV98 308 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 TSPY8P0CW00 308 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 CTHP32929 405 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 ZNF132P52740 706 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 TSPY1Q01534 308 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 C11orf91Q3C1V1 193 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 MCM10Q7L590 875 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 RASGRP2Q7LDG7 609 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 IFNL3Q8IZI9 196 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 LILRB2Q8N423 598 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 FAM160A2Q8N612 972 aaPredicted RBP5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 JMYQ8N9B5 988 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 GOLGA1Q92805 767 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 TYW1Q9NV66 732 aaKnown RBP5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 USP25Q9UHP3 1055 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 IPPQ9Y573 584 aa5.87□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L3A6NCW0 530 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L4A6NCW7 530 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 SMTNL1A8MU46 457 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 BOLA2-SMG1P6H3BVE0 249 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms