RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 EIF4A3P38919 411 aaKnown RBP11.81□□□□□ -0.52
SGMS1-206ENST00000602565 RACK1P63244 317 aaKnown RBP11.81□□□□□ -0.52
SGMS1-206ENST00000602565 LMNB2Q03252 620 aa11.81□□□□□ -0.52
SGMS1-206ENST00000602565 GRIK4Q16099 956 aa11.81□□□□□ -0.52
SGMS1-206ENST00000602565 RASIP1Q5U651 963 aa11.81□□□□□ -0.52
SGMS1-206ENST00000602565 APBA3O96018 575 aa11.8□□□□□ -0.52
SGMS1-206ENST00000602565 ZNF252P-AS1Q0IIN9 211 aa11.8□□□□□ -0.52
SGMS1-206ENST00000602565 RHOVQ96L33 236 aa11.8□□□□□ -0.52
SGMS1-206ENST00000602565 NACC1Q96RE7 527 aa11.8□□□□□ -0.52
SGMS1-206ENST00000602565 SPON2Q9BUD6 331 aa11.8□□□□□ -0.52
SGMS1-206ENST00000602565 RAD18Q9NS91 495 aa11.8□□□□□ -0.52
SGMS1-206ENST00000602565 KRT82Q9NSB4 513 aa11.8□□□□□ -0.52
SGMS1-206ENST00000602565 USP21Q9UK80 565 aa11.8□□□□□ -0.52
SGMS1-206ENST00000602565 PCDHB5Q9Y5E4 795 aa11.8□□□□□ -0.52
SGMS1-206ENST00000602565 RNF225M0QZC1 329 aaPredicted RBP11.79□□□□□ -0.52
SGMS1-206ENST00000602565 TRIM37O94972 964 aa11.79□□□□□ -0.52
SGMS1-206ENST00000602565 SEPT6Q14141 434 aa11.79□□□□□ -0.52
SGMS1-206ENST00000602565 SCARA3Q6AZY7 606 aa11.79□□□□□ -0.52
SGMS1-206ENST00000602565 KIAA0825Q8IV33 1275 aa11.79□□□□□ -0.52
SGMS1-206ENST00000602565 TRIM42Q8IWZ5 723 aa11.79□□□□□ -0.52
SGMS1-206ENST00000602565 GOLM1Q8NBJ4 401 aa11.79□□□□□ -0.52
SGMS1-206ENST00000602565 C8orf37Q96NL8 207 aa11.79□□□□□ -0.52
SGMS1-206ENST00000602565 RUSC1Q9BVN2 902 aa11.79□□□□□ -0.52
SGMS1-206ENST00000602565 ACBD3Q9H3P7 528 aa11.79□□□□□ -0.52
SGMS1-206ENST00000602565 CCDC86Q9H6F5 360 aaKnown RBP11.79□□□□□ -0.52
SGMS1-206ENST00000602565 SUPT16HQ9Y5B9 1047 aaKnown RBP11.79□□□□□ -0.52
SGMS1-206ENST00000602565 ZC3H6P61129 1189 aaKnown RBP11.78□□□□□ -0.52
SGMS1-206ENST00000602565 JARID2Q92833 1246 aaPredicted RBP11.78□□□□□ -0.52
SGMS1-206ENST00000602565 PUS7Q96PZ0 661 aaKnown RBP11.78□□□□□ -0.52
SGMS1-206ENST00000602565 WISP1O95388 367 aa11.77□□□□□ -0.53
SGMS1-206ENST00000602565 CTSBP07858 339 aa11.77□□□□□ -0.53
SGMS1-206ENST00000602565 COL8A1P27658 744 aa11.77□□□□□ -0.53
SGMS1-206ENST00000602565 SHISA2Q6UWI4 295 aa11.77□□□□□ -0.53
SGMS1-206ENST00000602565 ALYREFQ86V81 257 aaKnown RBP11.77□□□□□ -0.53
SGMS1-206ENST00000602565 GPBAR1Q8TDU6 330 aa11.77□□□□□ -0.53
SGMS1-206ENST00000602565 ZNF296Q8WUU4 475 aaPredicted RBP11.77□□□□□ -0.53
SGMS1-206ENST00000602565 RNF208Q9H0X6 261 aa11.77□□□□□ -0.53
SGMS1-206ENST00000602565 ADAMTS1Q9UHI8 967 aa11.77□□□□□ -0.53
SGMS1-206ENST00000602565 INPP5FQ9Y2H2 1132 aa11.77□□□□□ -0.53
SGMS1-206ENST00000602565 LIG1P18858 919 aa11.76□□□□□ -0.53
SGMS1-206ENST00000602565 GNL2Q13823 731 aaKnown RBP11.76□□□□□ -0.53
SGMS1-206ENST00000602565 EXOSC6Q5RKV6 272 aaKnown RBP11.76□□□□□ -0.53
SGMS1-206ENST00000602565 CAPN10Q9HC96 672 aa11.76□□□□□ -0.53
SGMS1-206ENST00000602565 PCDHA4Q9UN74 947 aa11.76□□□□□ -0.53
SGMS1-206ENST00000602565 BPNT1O95861 308 aa11.75□□□□□ -0.53
SGMS1-206ENST00000602565 NUTM2GQ5VZR2 741 aa11.75□□□□□ -0.53
SGMS1-206ENST00000602565 FBXL19Q6PCT2 694 aa11.75□□□□□ -0.53
SGMS1-206ENST00000602565 MPRIPQ6WCQ1 1025 aa11.75□□□□□ -0.53
SGMS1-206ENST00000602565 CCDC84Q86UT8 332 aaPredicted RBP11.75□□□□□ -0.53
SGMS1-206ENST00000602565 GAL3ST3Q96A11 431 aa11.75□□□□□ -0.53
SGMS1-206ENST00000602565 C9orf172C9J069 976 aa11.74□□□□□ -0.53
SGMS1-206ENST00000602565 DLGAP3O95886 979 aa11.74□□□□□ -0.53
SGMS1-206ENST00000602565 SELPP16109 830 aa11.74□□□□□ -0.53
SGMS1-206ENST00000602565 BNC2Q6ZN30 1099 aaPredicted RBP11.74□□□□□ -0.53
SGMS1-206ENST00000602565 KIAA1211Q6ZU35 1233 aa11.74□□□□□ -0.53
SGMS1-206ENST00000602565 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.74□□□□□ -0.53
SGMS1-206ENST00000602565 LENG1Q96BZ8 264 aaPredicted RBP11.74□□□□□ -0.53
SGMS1-206ENST00000602565 CYP4F12Q9HCS2 524 aa11.74□□□□□ -0.53
SGMS1-206ENST00000602565 ZNF862O60290 1169 aa11.73□□□□□ -0.53
SGMS1-206ENST00000602565 SLFN14P0C7P3 912 aa11.73□□□□□ -0.53
SGMS1-206ENST00000602565 NRG1Q02297 640 aaPredicted RBP11.73□□□□□ -0.53
SGMS1-206ENST00000602565 PAK2Q13177 524 aa11.73□□□□□ -0.53
SGMS1-206ENST00000602565 DRC1Q96MC2 740 aa11.73□□□□□ -0.53
SGMS1-206ENST00000602565 AOC2O75106 756 aa11.72□□□□□ -0.53
SGMS1-206ENST00000602565 TNNI2P48788 182 aa11.72□□□□□ -0.53
SGMS1-206ENST00000602565 AKAP4Q5JQC9 854 aa11.72□□□□□ -0.53
SGMS1-206ENST00000602565 FDX2Q6P4F2 183 aa11.72□□□□□ -0.53
SGMS1-206ENST00000602565 AGGF1Q8N302 714 aaeCLIP11.72□□□□□ -0.53
SGMS1-206ENST00000602565 SREK1Q8WXA9 508 aaKnown RBP11.72□□□□□ -0.53
SGMS1-206ENST00000602565 GATAD2BQ8WXI9 593 aa11.72□□□□□ -0.53
SGMS1-206ENST00000602565 WDR18Q9BV38 432 aa11.72□□□□□ -0.53
SGMS1-206ENST00000602565 KCNQ5Q9NR82 932 aa11.72□□□□□ -0.53
SGMS1-206ENST00000602565 F8W735 103 aaPredicted RBP11.71□□□□□ -0.53
SGMS1-206ENST00000602565 F13A1P00488 732 aa11.71□□□□□ -0.53
SGMS1-206ENST00000602565 GARTP22102 1010 aa11.71□□□□□ -0.53
SGMS1-206ENST00000602565 KIF4BQ2VIQ3 1234 aa11.71□□□□□ -0.53
SGMS1-206ENST00000602565 NAALADL2Q58DX5 795 aa11.71□□□□□ -0.53
SGMS1-206ENST00000602565 FAM196AQ6ZSG2 479 aa11.71□□□□□ -0.53
SGMS1-206ENST00000602565 GPRASP2Q96D09 838 aa11.71□□□□□ -0.53
SGMS1-206ENST00000602565 WDR89Q96FK6 387 aaPredicted RBP11.71□□□□□ -0.53
SGMS1-206ENST00000602565 TMPRSS13Q9BYE2 586 aa11.71□□□□□ -0.53
SGMS1-206ENST00000602565 AKTIPQ9H8T0 292 aa11.71□□□□□ -0.53
SGMS1-206ENST00000602565 MEGF11A6BM72 1044 aa11.7□□□□□ -0.54
SGMS1-206ENST00000602565 PTPN11Q06124 597 aaPredicted RBP11.7□□□□□ -0.54
SGMS1-206ENST00000602565 APOBRQ0VD83 1088 aa11.7□□□□□ -0.54
SGMS1-206ENST00000602565 TMEM130Q8N3G9 435 aa11.7□□□□□ -0.54
SGMS1-206ENST00000602565 ELMO3Q96BJ8 720 aa11.7□□□□□ -0.54
SGMS1-206ENST00000602565 NT5C1AQ9BXI3 368 aa11.7□□□□□ -0.54
SGMS1-206ENST00000602565 CACNA2D2Q9NY47 1150 aa11.7□□□□□ -0.54
SGMS1-206ENST00000602565 AP4E1Q9UPM8 1137 aa11.7□□□□□ -0.54
SGMS1-206ENST00000602565 TLR3O15455 904 aaKnown RBP11.69□□□□□ -0.54
SGMS1-206ENST00000602565 GREM1O60565 184 aa11.68□□□□□ -0.54
SGMS1-206ENST00000602565 ALX3O95076 343 aa11.68□□□□□ -0.54
SGMS1-206ENST00000602565 GLB1P16278 677 aa11.68□□□□□ -0.54
SGMS1-206ENST00000602565 RPL6Q02878 288 aaKnown RBP11.68□□□□□ -0.54
SGMS1-206ENST00000602565 MPP2Q14168 576 aa11.68□□□□□ -0.54
SGMS1-206ENST00000602565 CWF19L2Q2TBE0 894 aaKnown RBP11.68□□□□□ -0.54
SGMS1-206ENST00000602565 WIPI1Q5MNZ9 446 aaPredicted RBP11.68□□□□□ -0.54
SGMS1-206ENST00000602565 ANKRD34AQ69YU3 496 aa11.68□□□□□ -0.54
SGMS1-206ENST00000602565 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 820 ms