RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 BAG3O95817 575 aa20.91■□□□□ 0.94
SHKBP1-224ENST00000600718 PPP4CP60510 307 aa20.91■□□□□ 0.94
SHKBP1-224ENST00000600718 TOB2Q14106 344 aaPredicted RBP20.91■□□□□ 0.94
SHKBP1-224ENST00000600718 TCEANC2Q96MN5 208 aa20.91■□□□□ 0.94
SHKBP1-224ENST00000600718 NOL10Q9BSC4 688 aaKnown RBP20.91■□□□□ 0.94
SHKBP1-224ENST00000600718 NBPF3Q9H094 633 aa20.91■□□□□ 0.94
SHKBP1-224ENST00000600718 TRDNQ13061 729 aa20.9■□□□□ 0.94
SHKBP1-224ENST00000600718 Q6ZUG5 572 aa20.9■□□□□ 0.94
SHKBP1-224ENST00000600718 RALYLQ86SE5 291 aaKnown RBP20.9■□□□□ 0.94
SHKBP1-224ENST00000600718 SDR42E1Q8WUS8 393 aa20.9■□□□□ 0.94
SHKBP1-224ENST00000600718 FAM163AQ96GL9 167 aaPredicted RBP20.9■□□□□ 0.94
SHKBP1-224ENST00000600718 LARP6Q9BRS8 491 aaKnown RBP20.9■□□□□ 0.94
SHKBP1-224ENST00000600718 PIM2Q9P1W9 311 aa20.9■□□□□ 0.94
SHKBP1-224ENST00000600718 MROH7-TTC4A0A0A0MT08 1334 aa20.9■□□□□ 0.94
SHKBP1-224ENST00000600718 SGIP1Q9BQI5 828 aa20.9■□□□□ 0.94
SHKBP1-224ENST00000600718 ATP8A2Q9NTI2 1148 aa20.9■□□□□ 0.94
SHKBP1-224ENST00000600718 KIAA1551Q9HCM1 1747 aa20.89■□□□□ 0.94
SHKBP1-224ENST00000600718 KIAA2012Q0VF49 1180 aa20.89■□□□□ 0.93
SHKBP1-224ENST00000600718 SOGA3Q5TF21 947 aa20.89■□□□□ 0.93
SHKBP1-224ENST00000600718 TBC1D10CQ8IV04 446 aa20.89■□□□□ 0.93
SHKBP1-224ENST00000600718 FBXL16Q8N461 479 aa20.89■□□□□ 0.93
SHKBP1-224ENST00000600718 TPCN1Q9ULQ1 816 aa20.89■□□□□ 0.93
SHKBP1-224ENST00000600718 WDR19Q8NEZ3 1342 aa20.89■□□□□ 0.93
SHKBP1-224ENST00000600718 MCM5P33992 734 aa20.88■□□□□ 0.93
SHKBP1-224ENST00000600718 FGD1P98174 961 aa20.88■□□□□ 0.93
SHKBP1-224ENST00000600718 DIXDC1Q155Q3 683 aa20.88■□□□□ 0.93
SHKBP1-224ENST00000600718 MB21D2Q8IYB1 491 aaPredicted RBP20.88■□□□□ 0.93
SHKBP1-224ENST00000600718 FBXW7Q969H0 707 aa20.88■□□□□ 0.93
SHKBP1-224ENST00000600718 PSMD1Q99460 953 aa20.88■□□□□ 0.93
SHKBP1-224ENST00000600718 AGXT2Q9BYV1 514 aa20.88■□□□□ 0.93
SHKBP1-224ENST00000600718 DBNDD1Q9H9R9 158 aa20.88■□□□□ 0.93
SHKBP1-224ENST00000600718 ANAPC4Q9UJX5 808 aa20.88■□□□□ 0.93
SHKBP1-224ENST00000600718 CD2APQ9Y5K6 639 aa20.88■□□□□ 0.93
SHKBP1-224ENST00000600718 FKBP1AP62942 108 aaKnown RBP20.88■□□□□ 0.93
SHKBP1-224ENST00000600718 PSDA5PKW4 1024 aaPredicted RBP20.87■□□□□ 0.93
SHKBP1-224ENST00000600718 ECE2O60344 883 aa20.87■□□□□ 0.93
SHKBP1-224ENST00000600718 ME3Q16798 604 aa20.87■□□□□ 0.93
SHKBP1-224ENST00000600718 AKNAD1Q5T1N1 836 aa20.87■□□□□ 0.93
SHKBP1-224ENST00000600718 CNNM2Q9H8M5 875 aa20.87■□□□□ 0.93
SHKBP1-224ENST00000600718 GPR75-ASB3A0A0A6YYF3 556 aa20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 PPARAQ07869 468 aa20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 AOC3Q16853 763 aa20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 STRIP1Q5VSL9 837 aa20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 STAG1Q8WVM7 1258 aa20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 VPS33BQ9H267 617 aa20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 LAMA4Q16363 1823 aa20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 LARGE1O95461 756 aa20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 PLCG2P16885 1265 aa20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 CTDSPL2Q05D32 466 aa20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 MFSD6Q6ZSS7 791 aa20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 CERS5Q8N5B7 392 aa20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 RNF41Q9H4P4 317 aaPredicted RBP20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 DCP1AQ9NPI6 582 aaPredicted RBP20.86■□□□□ 0.93
SHKBP1-224ENST00000600718 GAKO14976 1311 aa20.85■□□□□ 0.93
SHKBP1-224ENST00000600718 PRC1O43663 620 aa20.85■□□□□ 0.93
SHKBP1-224ENST00000600718 DALRD3Q5D0E6 543 aaKnown RBP20.85■□□□□ 0.93
SHKBP1-224ENST00000600718 BRF1Q92994 677 aa20.85■□□□□ 0.93
SHKBP1-224ENST00000600718 LRRC2Q9BYS8 371 aa20.85■□□□□ 0.93
SHKBP1-224ENST00000600718 KRT23Q9C075 422 aa20.85■□□□□ 0.93
SHKBP1-224ENST00000600718 CHD4Q14839 1912 aa20.85■□□□□ 0.93
SHKBP1-224ENST00000600718 MINDY4BA8MYZ0 360 aa20.85■□□□□ 0.93
SHKBP1-224ENST00000600718 PPIP5K2O43314 1243 aa20.85■□□□□ 0.93
SHKBP1-224ENST00000600718 PTGER2P43116 358 aa20.85■□□□□ 0.93
SHKBP1-224ENST00000600718 CTR9Q6PD62 1173 aa20.85■□□□□ 0.93
SHKBP1-224ENST00000600718 USP17L3A6NCW0 530 aa20.84■□□□□ 0.93
SHKBP1-224ENST00000600718 USP17L4A6NCW7 530 aa20.84■□□□□ 0.93
SHKBP1-224ENST00000600718 BTDP43251 543 aa20.84■□□□□ 0.93
SHKBP1-224ENST00000600718 NUCB2P80303 420 aa20.84■□□□□ 0.93
SHKBP1-224ENST00000600718 SBK1Q52WX2 424 aa20.84■□□□□ 0.93
SHKBP1-224ENST00000600718 USP17L1Q7RTZ2 530 aa20.84■□□□□ 0.93
SHKBP1-224ENST00000600718 SH3RF3Q8TEJ3 882 aaPredicted RBP20.84■□□□□ 0.93
SHKBP1-224ENST00000600718 USP5P45974 858 aa20.83■□□□□ 0.93
SHKBP1-224ENST00000600718 CHST3Q7LGC8 479 aa20.83■□□□□ 0.93
SHKBP1-224ENST00000600718 CCDC83Q8IWF9 413 aa20.83■□□□□ 0.93
SHKBP1-224ENST00000600718 ARPP21Q9UBL0 812 aaPredicted RBP20.83■□□□□ 0.93
SHKBP1-224ENST00000600718 PPP1R1BQ9UD71 204 aaPredicted RBP20.83■□□□□ 0.93
SHKBP1-224ENST00000600718 TTF2Q9UNY4 1162 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-224ENST00000600718 TIAM2Q8IVF5 1701 aa20.83■□□□□ 0.92
SHKBP1-224ENST00000600718 USP17L12C9JPN9 530 aa20.83■□□□□ 0.92
SHKBP1-224ENST00000600718 USP17L21D6R901 530 aa20.83■□□□□ 0.92
SHKBP1-224ENST00000600718 PCP11498 1178 aaKnown RBP20.83■□□□□ 0.92
SHKBP1-224ENST00000600718 ANTXR2P58335 489 aa20.83■□□□□ 0.92
SHKBP1-224ENST00000600718 KCNQ5Q9NR82 932 aa20.83■□□□□ 0.92
SHKBP1-224ENST00000600718 NEDD4P46934 1319 aa20.82■□□□□ 0.92
SHKBP1-224ENST00000600718 B4E1Z4 1266 aa20.82■□□□□ 0.92
SHKBP1-224ENST00000600718 EVCP57679 992 aa20.82■□□□□ 0.92
SHKBP1-224ENST00000600718 RAB3GAP1Q15042 981 aa20.82■□□□□ 0.92
SHKBP1-224ENST00000600718 DACT2Q5SW24 774 aa20.82■□□□□ 0.92
SHKBP1-224ENST00000600718 NECAB1Q8N987 351 aa20.82■□□□□ 0.92
SHKBP1-224ENST00000600718 MRIQ9BWK5 157 aa20.82■□□□□ 0.92
SHKBP1-224ENST00000600718 MKRN1Q9UHC7 482 aaKnown RBP20.82■□□□□ 0.92
SHKBP1-224ENST00000600718 HHIPL2Q6UWX4 724 aa20.81■□□□□ 0.92
SHKBP1-224ENST00000600718 ZNF274Q96GC6 653 aaPredicted RBP20.81■□□□□ 0.92
SHKBP1-224ENST00000600718 TMEM87BQ96K49 555 aa20.81■□□□□ 0.92
SHKBP1-224ENST00000600718 MXD3Q9BW11 206 aa20.81■□□□□ 0.92
SHKBP1-224ENST00000600718 INCENPQ9NQS7 918 aa20.81■□□□□ 0.92
SHKBP1-224ENST00000600718 SMC3Q9UQE7 1217 aa20.81■□□□□ 0.92
SHKBP1-224ENST00000600718 DAGLAQ9Y4D2 1042 aa20.81■□□□□ 0.92
SHKBP1-224ENST00000600718 TACC3Q9Y6A5 838 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms