RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 FBXW7Q969H0 707 aa18■□□□□ 0.47
VRK3-218ENST00000600031 AATFQ9NY61 560 aaKnown RBP eCLIP18■□□□□ 0.47
VRK3-218ENST00000600031 ZNF213O14771 459 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 RPS6KB1P23443 525 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 PODNQ7Z5L7 613 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 TCEANC2Q96MN5 208 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 LARP6Q9BRS8 491 aaKnown RBP17.99■□□□□ 0.47
VRK3-218ENST00000600031 KCNQ5Q9NR82 932 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 KIAA2012Q0VF49 1180 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 ILDR2Q71H61 639 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 RTKN2Q8IZC4 609 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 SUPT20HQ8NEM7 779 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 TMX3Q96JJ7 454 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 MXD3Q9BW11 206 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 NBPF3Q9H094 633 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 NAPBQ9H115 298 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 CD2APQ9Y5K6 639 aa17.99■□□□□ 0.47
VRK3-218ENST00000600031 ZMYM6O95789 1325 aa17.98■□□□□ 0.47
VRK3-218ENST00000600031 LAMA4Q16363 1823 aa17.98■□□□□ 0.47
VRK3-218ENST00000600031 GSTO1P78417 241 aa17.98■□□□□ 0.47
VRK3-218ENST00000600031 GRIPAP1Q4V328 841 aa17.98■□□□□ 0.47
VRK3-218ENST00000600031 CERS5Q8N5B7 392 aa17.98■□□□□ 0.47
VRK3-218ENST00000600031 ECE2O60344 883 aa17.98■□□□□ 0.47
VRK3-218ENST00000600031 CLEC17AQ6ZS10 378 aa17.98■□□□□ 0.47
VRK3-218ENST00000600031 MYH2Q9UKX2 1941 aa17.97■□□□□ 0.47
VRK3-218ENST00000600031 BRCA1P38398 1863 aaKnown RBP17.97■□□□□ 0.47
VRK3-218ENST00000600031 TDO2P48775 406 aa17.97■□□□□ 0.47
VRK3-218ENST00000600031 DALRD3Q5D0E6 543 aaKnown RBP17.97■□□□□ 0.47
VRK3-218ENST00000600031 PSMD1Q99460 953 aa17.97■□□□□ 0.47
VRK3-218ENST00000600031 NACAP1Q9BZK3 213 aa17.97■□□□□ 0.47
VRK3-218ENST00000600031 SCN9AQ15858 1988 aa17.96■□□□□ 0.47
VRK3-218ENST00000600031 PPIP5K2O43314 1243 aa17.96■□□□□ 0.47
VRK3-218ENST00000600031 MROH7-TTC4A0A0A0MT08 1334 aa17.96■□□□□ 0.47
VRK3-218ENST00000600031 LDHCP07864 332 aa17.96■□□□□ 0.47
VRK3-218ENST00000600031 TBC1D10CQ8IV04 446 aa17.96■□□□□ 0.47
VRK3-218ENST00000600031 GOLGA6L22H0YM25 854 aa17.95■□□□□ 0.46
VRK3-218ENST00000600031 DHX32Q7L7V1 743 aaKnown RBP17.95■□□□□ 0.46
VRK3-218ENST00000600031 GRPEL1Q9HAV7 217 aa17.95■□□□□ 0.46
VRK3-218ENST00000600031 LIMCH1Q9UPQ0 1083 aa17.95■□□□□ 0.46
VRK3-218ENST00000600031 SUGT1Q9Y2Z0 365 aa17.95■□□□□ 0.46
VRK3-218ENST00000600031 F8W031 263 aaPredicted RBP17.95■□□□□ 0.46
VRK3-218ENST00000600031 HMGB1P09429 215 aaKnown RBP17.95■□□□□ 0.46
VRK3-218ENST00000600031 PPP4CP60510 307 aa17.95■□□□□ 0.46
VRK3-218ENST00000600031 TOB2Q14106 344 aaPredicted RBP17.95■□□□□ 0.46
VRK3-218ENST00000600031 CRNKL1Q9BZJ0 848 aaKnown RBP17.95■□□□□ 0.46
VRK3-218ENST00000600031 ALDH8A1Q9H2A2 487 aaPredicted RBP17.95■□□□□ 0.46
VRK3-218ENST00000600031 ZNF277Q9NRM2 450 aaPredicted RBP17.95■□□□□ 0.46
VRK3-218ENST00000600031 EXOSC10Q01780 885 aaKnown RBP17.94■□□□□ 0.46
VRK3-218ENST00000600031 SOGA3Q5TF21 947 aa17.94■□□□□ 0.46
VRK3-218ENST00000600031 STRIP1Q5VSL9 837 aa17.94■□□□□ 0.46
VRK3-218ENST00000600031 SH3RF3Q8TEJ3 882 aaPredicted RBP17.94■□□□□ 0.46
VRK3-218ENST00000600031 FAM163AQ96GL9 167 aaPredicted RBP17.94■□□□□ 0.46
VRK3-218ENST00000600031 LRRC2Q9BYS8 371 aa17.94■□□□□ 0.46
VRK3-218ENST00000600031 BAZ2AQ9UIF9 1905 aaKnown RBP17.93■□□□□ 0.46
VRK3-218ENST00000600031 YDJCA8MPS7 323 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 BAG3O95817 575 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 CTDSPL2Q05D32 466 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 CUL4AQ13619 759 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 CHST3Q7LGC8 479 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 NKX2-3Q8TAU0 364 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 INCENPQ9NQS7 918 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 TACC3Q9Y6A5 838 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 GPR75-ASB3A0A0A6YYF3 556 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 LARGE1O95461 756 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 BTDP43251 543 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 DACT2Q5SW24 774 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 GIMAP6Q6P9H5 292 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 Q6ZUG5 572 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 NLGN2Q8NFZ4 835 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 SPON1Q9HCB6 807 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 TTF2Q9UNY4 1162 aaKnown RBP17.93■□□□□ 0.46
VRK3-218ENST00000600031 GAKO14976 1311 aa17.93■□□□□ 0.46
VRK3-218ENST00000600031 ZNF646O15015 1829 aaPredicted RBP17.92■□□□□ 0.46
VRK3-218ENST00000600031 USP17L3A6NCW0 530 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 USP17L4A6NCW7 530 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 SMIM22K7EJ46 135 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 USP17L1Q7RTZ2 530 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 SLF2Q8IX21 1173 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 MB21D2Q8IYB1 491 aaPredicted RBP17.92■□□□□ 0.46
VRK3-218ENST00000600031 NCOA7Q8NI08 942 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 NOL10Q9BSC4 688 aaKnown RBP17.92■□□□□ 0.46
VRK3-218ENST00000600031 DCP1AQ9NPI6 582 aaPredicted RBP17.92■□□□□ 0.46
VRK3-218ENST00000600031 TPCN1Q9ULQ1 816 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 COL4A5P29400 1685 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 MINDY4BA8MYZ0 360 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 NUCB2P80303 420 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 PPARAQ07869 468 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 ANKRD1Q15327 319 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 LARGE2Q8N3Y3 721 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 PANK2Q9BZ23 570 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 RRAGDQ9NQL2 400 aaPredicted RBP17.92■□□□□ 0.46
VRK3-218ENST00000600031 ATP8A2Q9NTI2 1148 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
VRK3-218ENST00000600031 CYP2D7A0A087X1C5 515 aa17.91■□□□□ 0.46
VRK3-218ENST00000600031 FKBP1AP62942 108 aaKnown RBP17.91■□□□□ 0.46
VRK3-218ENST00000600031 CTR9Q6PD62 1173 aa17.91■□□□□ 0.46
VRK3-218ENST00000600031 DAGLAQ9Y4D2 1042 aa17.91■□□□□ 0.46
VRK3-218ENST00000600031 SCNN1DP51172 638 aa17.9■□□□□ 0.46
VRK3-218ENST00000600031 ME3Q16798 604 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms