RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-219ENST00000599575 PDE6AP16499 860 aa20.03■□□□□ 0.8
SHKBP1-219ENST00000599575 PDE4AP27815 886 aa20.03■□□□□ 0.8
SHKBP1-219ENST00000599575 TNNI2P48788 182 aa20.03■□□□□ 0.8
SHKBP1-219ENST00000599575 KRT26Q7Z3Y9 468 aa20.03■□□□□ 0.8
SHKBP1-219ENST00000599575 MAGEB6Q8N7X4 407 aa20.03■□□□□ 0.8
SHKBP1-219ENST00000599575 ZNF70Q9UC06 446 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-219ENST00000599575 CYP7A1P22680 504 aa20.02■□□□□ 0.8
SHKBP1-219ENST00000599575 ADD2P35612 726 aa20.02■□□□□ 0.8
SHKBP1-219ENST00000599575 BTDP43251 543 aa20.02■□□□□ 0.8
SHKBP1-219ENST00000599575 MAP1SQ66K74 1059 aaPredicted RBP20.02■□□□□ 0.8
SHKBP1-219ENST00000599575 FAM83AQ86UY5 434 aa20.02■□□□□ 0.8
SHKBP1-219ENST00000599575 TDRD3Q9H7E2 651 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-219ENST00000599575 RFX7Q2KHR2 1363 aa20.02■□□□□ 0.8
SHKBP1-219ENST00000599575 MAST2Q6P0Q8 1798 aa20.01■□□□□ 0.79
SHKBP1-219ENST00000599575 ITGBL1O95965 494 aaPredicted RBP20.01■□□□□ 0.79
SHKBP1-219ENST00000599575 CDC42EP5Q6NZY7 148 aa20.01■□□□□ 0.79
SHKBP1-219ENST00000599575 EDC3Q96F86 508 aaKnown RBP20.01■□□□□ 0.79
SHKBP1-219ENST00000599575 IDI2Q9BXS1 227 aa20.01■□□□□ 0.79
SHKBP1-219ENST00000599575 USP40Q9NVE5 1235 aa20.01■□□□□ 0.79
SHKBP1-219ENST00000599575 TCRBV5S4A2TA0A5A2 114 aa20■□□□□ 0.79
SHKBP1-219ENST00000599575 FSD1Q9BTV5 496 aa20■□□□□ 0.79
SHKBP1-219ENST00000599575 PCDHAC2Q9Y5I4 1007 aa20■□□□□ 0.79
SHKBP1-219ENST00000599575 ZNF532Q9HCE3 1301 aa20■□□□□ 0.79
SHKBP1-219ENST00000599575 DOCK2Q92608 1830 aa19.99■□□□□ 0.79
SHKBP1-219ENST00000599575 RNF113AO15541 343 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-219ENST00000599575 ENTPD3O75355 529 aa19.99■□□□□ 0.79
SHKBP1-219ENST00000599575 RHBDL3P58872 404 aa19.99■□□□□ 0.79
SHKBP1-219ENST00000599575 HOOK2Q96ED9 719 aa19.99■□□□□ 0.79
SHKBP1-219ENST00000599575 DEFB129Q9H1M3 183 aa19.99■□□□□ 0.79
SHKBP1-219ENST00000599575 VEZTQ9HBM0 779 aa19.99■□□□□ 0.79
SHKBP1-219ENST00000599575 ASTN2O75129 1339 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-219ENST00000599575 PASKQ96RG2 1323 aa19.99■□□□□ 0.79
SHKBP1-219ENST00000599575 CLRN2A0PK11 232 aa19.98■□□□□ 0.79
SHKBP1-219ENST00000599575 TRIM6-TRIM34B2RNG4 842 aa19.98■□□□□ 0.79
SHKBP1-219ENST00000599575 HIP1O00291 1037 aa19.98■□□□□ 0.79
SHKBP1-219ENST00000599575 TTC22Q5TAA0 569 aa19.98■□□□□ 0.79
SHKBP1-219ENST00000599575 USP48Q86UV5 1035 aa19.98■□□□□ 0.79
SHKBP1-219ENST00000599575 RPAP1Q9BWH6 1393 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-219ENST00000599575 SUPT20HL1Q3ZLR7 823 aa19.97■□□□□ 0.79
SHKBP1-219ENST00000599575 ADGRA1Q86SQ6 560 aa19.97■□□□□ 0.79
SHKBP1-219ENST00000599575 FAM151AQ8WW52 585 aa19.97■□□□□ 0.79
SHKBP1-219ENST00000599575 APPBP2Q92624 585 aa19.97■□□□□ 0.79
SHKBP1-219ENST00000599575 GLIS2Q9BZE0 524 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-219ENST00000599575 AATFQ9NY61 560 aaKnown RBP eCLIP19.97■□□□□ 0.79
SHKBP1-219ENST00000599575 MAGEB6P1A0A0J9YX57 407 aa19.96■□□□□ 0.79
SHKBP1-219ENST00000599575 NF2P35240 595 aa19.96■□□□□ 0.79
SHKBP1-219ENST00000599575 RASA3Q14644 834 aa19.96■□□□□ 0.79
SHKBP1-219ENST00000599575 RIOK1Q9BRS2 568 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-219ENST00000599575 WDHD1O75717 1129 aaPredicted RBP19.95■□□□□ 0.78
SHKBP1-219ENST00000599575 C1QTNF8P60827 252 aa19.95■□□□□ 0.78
SHKBP1-219ENST00000599575 FKBP1BP68106 108 aa19.95■□□□□ 0.78
SHKBP1-219ENST00000599575 TEX11Q8IYF3 940 aa19.95■□□□□ 0.78
SHKBP1-219ENST00000599575 CRNKL1Q9BZJ0 848 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-219ENST00000599575 ECM29Q5VYK3 1845 aa19.95■□□□□ 0.78
SHKBP1-219ENST00000599575 MYH2Q9UKX2 1941 aa19.94■□□□□ 0.78
SHKBP1-219ENST00000599575 TCP10L2B9ZVM9 353 aa19.94■□□□□ 0.78
SHKBP1-219ENST00000599575 RILPL2Q969X0 211 aa19.94■□□□□ 0.78
SHKBP1-219ENST00000599575 AIDAQ96BJ3 306 aa19.94■□□□□ 0.78
SHKBP1-219ENST00000599575 CDCA5Q96FF9 252 aa19.94■□□□□ 0.78
SHKBP1-219ENST00000599575 COL2A1P02458 1487 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-219ENST00000599575 ADM5C9JUS6 153 aa19.93■□□□□ 0.78
SHKBP1-219ENST00000599575 GNAT2P19087 354 aa19.93■□□□□ 0.78
SHKBP1-219ENST00000599575 BMP2KLQ5H9B9 411 aa19.93■□□□□ 0.78
SHKBP1-219ENST00000599575 ZMYM1Q5SVZ6 1142 aa19.93■□□□□ 0.78
SHKBP1-219ENST00000599575 MIGA1Q8NAN2 632 aa19.93■□□□□ 0.78
SHKBP1-219ENST00000599575 SH3RF3Q8TEJ3 882 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-219ENST00000599575 DHX36Q9H2U1 1008 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-219ENST00000599575 HELLSQ9NRZ9 838 aa19.93■□□□□ 0.78
SHKBP1-219ENST00000599575 FAM198AQ9UFP1 575 aa19.93■□□□□ 0.78
SHKBP1-219ENST00000599575 TAOK2Q9UL54 1235 aa19.93■□□□□ 0.78
SHKBP1-219ENST00000599575 CNTNAP1P78357 1384 aa19.93■□□□□ 0.78
SHKBP1-219ENST00000599575 UNCXA6NJT0 531 aa19.92■□□□□ 0.78
SHKBP1-219ENST00000599575 RGS3P49796 1198 aa19.92■□□□□ 0.78
SHKBP1-219ENST00000599575 APLP1P51693 650 aa19.92■□□□□ 0.78
SHKBP1-219ENST00000599575 NFIAQ12857 509 aa19.92■□□□□ 0.78
SHKBP1-219ENST00000599575 ATP8A2Q9NTI2 1148 aa19.92■□□□□ 0.78
SHKBP1-219ENST00000599575 ATRNL1Q5VV63 1379 aa19.92■□□□□ 0.78
SHKBP1-219ENST00000599575 GSPT1P15170 499 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-219ENST00000599575 SDSP20132 328 aa19.91■□□□□ 0.78
SHKBP1-219ENST00000599575 CACNB3P54284 484 aa19.91■□□□□ 0.78
SHKBP1-219ENST00000599575 MFAP1P55081 439 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-219ENST00000599575 GIMAP6Q6P9H5 292 aa19.91■□□□□ 0.78
SHKBP1-219ENST00000599575 DDRGK1Q96HY6 314 aa19.91■□□□□ 0.78
SHKBP1-219ENST00000599575 TEPSINQ96N21 525 aa19.91■□□□□ 0.78
SHKBP1-219ENST00000599575 PUS7LQ9H0K6 701 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-219ENST00000599575 TMEM88BA6NKF7 163 aa19.9■□□□□ 0.78
SHKBP1-219ENST00000599575 TRAF5O00463 557 aa19.9■□□□□ 0.78
SHKBP1-219ENST00000599575 PPP1R12BO60237 982 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-219ENST00000599575 MBD4O95243 580 aa19.9■□□□□ 0.78
SHKBP1-219ENST00000599575 USP5P45974 858 aa19.9■□□□□ 0.78
SHKBP1-219ENST00000599575 DYNLL1P63167 89 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-219ENST00000599575 OSBP2Q969R2 916 aa19.9■□□□□ 0.78
SHKBP1-219ENST00000599575 TMEM39BQ9GZU3 492 aa19.9■□□□□ 0.78
SHKBP1-219ENST00000599575 OSBPL5Q9H0X9 879 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-219ENST00000599575 CELF2O95319 508 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-219ENST00000599575 FLT1P17948 1338 aa19.89■□□□□ 0.77
SHKBP1-219ENST00000599575 DCAF15Q66K64 600 aa19.89■□□□□ 0.77
SHKBP1-219ENST00000599575 C2orf69Q8N8R5 385 aa19.89■□□□□ 0.77
SHKBP1-219ENST00000599575 TGFBRAP1Q8WUH2 860 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms