RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 SENP3-EIF4A1A0A087X0R7 540 aa13.36□□□□□ -0.27
SMG9-207ENST00000598860 M0R2N6 131 aa13.36□□□□□ -0.27
SMG9-207ENST00000598860 SERPINB4P48594 390 aa13.36□□□□□ -0.27
SMG9-207ENST00000598860 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMG9-207ENST00000598860 FOXD4L4Q8WXT5 416 aaPredicted RBP13.36□□□□□ -0.27
SMG9-207ENST00000598860 SERTAD1Q9UHV2 236 aa13.36□□□□□ -0.27
SMG9-207ENST00000598860 TAF1LQ8IZX4 1826 aa13.35□□□□□ -0.27
SMG9-207ENST00000598860 LGR5O75473 907 aa13.35□□□□□ -0.27
SMG9-207ENST00000598860 POLD1P28340 1107 aa13.35□□□□□ -0.27
SMG9-207ENST00000598860 GPC1P35052 558 aa13.35□□□□□ -0.27
SMG9-207ENST00000598860 CENPCQ03188 943 aa13.35□□□□□ -0.27
SMG9-207ENST00000598860 ITPK1Q13572 414 aa13.35□□□□□ -0.27
SMG9-207ENST00000598860 DCTN1Q14203 1278 aa13.35□□□□□ -0.27
SMG9-207ENST00000598860 TSEN2Q8NCE0 465 aaKnown RBP13.35□□□□□ -0.27
SMG9-207ENST00000598860 HINFPQ9BQA5 517 aa13.35□□□□□ -0.27
SMG9-207ENST00000598860 SLC52A2Q9HAB3 445 aa13.35□□□□□ -0.27
SMG9-207ENST00000598860 HRH3Q9Y5N1 445 aa13.35□□□□□ -0.27
SMG9-207ENST00000598860 QSER1Q2KHR3 1735 aa13.35□□□□□ -0.27
SMG9-207ENST00000598860 C5P01031 1676 aa13.34□□□□□ -0.27
SMG9-207ENST00000598860 PTCD1O75127 700 aaKnown RBP13.34□□□□□ -0.27
SMG9-207ENST00000598860 SLFN5Q08AF3 891 aa13.34□□□□□ -0.27
SMG9-207ENST00000598860 TAF7Q15545 349 aaPredicted RBP13.34□□□□□ -0.27
SMG9-207ENST00000598860 LINC00116Q8NCU8 138 aa13.34□□□□□ -0.27
SMG9-207ENST00000598860 THUMPD2Q9BTF0 503 aaKnown RBP13.34□□□□□ -0.27
SMG9-207ENST00000598860 LAMB4A4D0S4 1761 aa13.34□□□□□ -0.27
SMG9-207ENST00000598860 ZNF853P0CG23 659 aa13.33□□□□□ -0.28
SMG9-207ENST00000598860 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.33□□□□□ -0.28
SMG9-207ENST00000598860 TAS1R3Q7RTX0 852 aa13.33□□□□□ -0.28
SMG9-207ENST00000598860 PRICKLE2Q7Z3G6 844 aa13.33□□□□□ -0.28
SMG9-207ENST00000598860 SLC4A9Q96Q91 983 aa13.33□□□□□ -0.28
SMG9-207ENST00000598860 ZNF358Q9NW07 568 aa13.33□□□□□ -0.28
SMG9-207ENST00000598860 ZNF831Q5JPB2 1677 aa13.33□□□□□ -0.28
SMG9-207ENST00000598860 TUBGCP6Q96RT7 1819 aa13.32□□□□□ -0.28
SMG9-207ENST00000598860 SOWAHDA6NJG2 315 aa13.32□□□□□ -0.28
SMG9-207ENST00000598860 CHL1O00533 1208 aa13.32□□□□□ -0.28
SMG9-207ENST00000598860 LYSMD3Q7Z3D4 306 aa13.32□□□□□ -0.28
SMG9-207ENST00000598860 GRIP2Q9C0E4 1043 aa13.32□□□□□ -0.28
SMG9-207ENST00000598860 C4BP0C0L5 1744 aa13.32□□□□□ -0.28
SMG9-207ENST00000598860 CICQ96RK0 1608 aaPredicted RBP13.31□□□□□ -0.28
SMG9-207ENST00000598860 CENPBP07199 599 aaPredicted RBP13.31□□□□□ -0.28
SMG9-207ENST00000598860 TLR1Q15399 786 aa13.31□□□□□ -0.28
SMG9-207ENST00000598860 TRMT2AQ8IZ69 625 aaKnown RBP13.31□□□□□ -0.28
SMG9-207ENST00000598860 ZSCAN10Q96SZ4 725 aaPredicted RBP13.31□□□□□ -0.28
SMG9-207ENST00000598860 FHDC1Q9C0D6 1143 aaPredicted RBP13.31□□□□□ -0.28
SMG9-207ENST00000598860 TSPYL4Q9UJ04 414 aa13.31□□□□□ -0.28
SMG9-207ENST00000598860 FANCIQ9NVI1 1328 aa13.31□□□□□ -0.28
SMG9-207ENST00000598860 BTBD11A6QL63 1104 aa13.3□□□□□ -0.28
SMG9-207ENST00000598860 BACH1O14867 736 aa13.3□□□□□ -0.28
SMG9-207ENST00000598860 WEE1P30291 646 aa13.3□□□□□ -0.28
SMG9-207ENST00000598860 SLC39A6Q13433 755 aa13.3□□□□□ -0.28
SMG9-207ENST00000598860 DUSP27Q5VZP5 1158 aa13.3□□□□□ -0.28
SMG9-207ENST00000598860 MSL1Q68DK7 614 aa13.3□□□□□ -0.28
SMG9-207ENST00000598860 SMIM5Q71RC9 77 aa13.3□□□□□ -0.28
SMG9-207ENST00000598860 SYT17Q9BSW7 474 aa13.3□□□□□ -0.28
SMG9-207ENST00000598860 MBIPQ9NS73 344 aa13.3□□□□□ -0.28
SMG9-207ENST00000598860 RTCBQ9Y3I0 505 aaKnown RBP13.3□□□□□ -0.28
SMG9-207ENST00000598860 LAS1LQ9Y4W2 734 aaKnown RBP13.3□□□□□ -0.28
SMG9-207ENST00000598860 SOS1Q07889 1333 aaPredicted RBP13.3□□□□□ -0.28
SMG9-207ENST00000598860 CT47B1P0C2W7 299 aaPredicted RBP13.29□□□□□ -0.28
SMG9-207ENST00000598860 SMTNP53814 917 aa13.29□□□□□ -0.28
SMG9-207ENST00000598860 TRAPPC3LQ5T215 181 aa13.29□□□□□ -0.28
SMG9-207ENST00000598860 AMIGO3Q86WK7 504 aa13.29□□□□□ -0.28
SMG9-207ENST00000598860 RPS6KA4O75676 772 aa13.28□□□□□ -0.28
SMG9-207ENST00000598860 RHOQP17081 205 aa13.28□□□□□ -0.28
SMG9-207ENST00000598860 TTC5Q8N0Z6 440 aa13.28□□□□□ -0.28
SMG9-207ENST00000598860 CNTNAP4Q9C0A0 1308 aa13.28□□□□□ -0.28
SMG9-207ENST00000598860 UBR3Q6ZT12 1888 aa13.27□□□□□ -0.28
SMG9-207ENST00000598860 CRKLP46109 303 aaKnown RBP13.27□□□□□ -0.29
SMG9-207ENST00000598860 TMEM214Q6NUQ4 689 aaKnown RBP13.27□□□□□ -0.29
SMG9-207ENST00000598860 ZNF790Q6PG37 636 aa13.27□□□□□ -0.29
SMG9-207ENST00000598860 TSR2Q969E8 191 aaKnown RBP13.27□□□□□ -0.29
SMG9-207ENST00000598860 CHMP4AQ9BY43 222 aa13.27□□□□□ -0.29
SMG9-207ENST00000598860 KCPQ6ZWJ8 1503 aa13.27□□□□□ -0.29
SMG9-207ENST00000598860 A6NJY4 79 aa13.26□□□□□ -0.29
SMG9-207ENST00000598860 HOXB7P09629 217 aa13.26□□□□□ -0.29
SMG9-207ENST00000598860 GTF2E1P29083 439 aaPredicted RBP13.26□□□□□ -0.29
SMG9-207ENST00000598860 POU4F2Q12837 409 aa13.26□□□□□ -0.29
SMG9-207ENST00000598860 FKBP5Q13451 457 aaPredicted RBP13.26□□□□□ -0.29
SMG9-207ENST00000598860 COL24A1Q17RW2 1714 aa13.26□□□□□ -0.29
SMG9-207ENST00000598860 DNAJC10Q8IXB1 793 aa13.26□□□□□ -0.29
SMG9-207ENST00000598860 ZNF428Q96B54 188 aa13.26□□□□□ -0.29
SMG9-207ENST00000598860 COL5A3P25940 1745 aaPredicted RBP13.25□□□□□ -0.29
SMG9-207ENST00000598860 TJP1Q07157 1748 aa13.25□□□□□ -0.29
SMG9-207ENST00000598860 RFC4P35249 363 aa13.25□□□□□ -0.29
SMG9-207ENST00000598860 MKNK1Q9BUB5 465 aa13.25□□□□□ -0.29
SMG9-207ENST00000598860 EGFL7Q9UHF1 273 aa13.25□□□□□ -0.29
SMG9-207ENST00000598860 HEG1Q9ULI3 1381 aa13.24□□□□□ -0.29
SMG9-207ENST00000598860 MYH14Q7Z406 1995 aaKnown RBP13.24□□□□□ -0.29
SMG9-207ENST00000598860 ABL1P00519 1130 aa13.24□□□□□ -0.29
SMG9-207ENST00000598860 EIF4A1P60842 406 aaKnown RBP13.24□□□□□ -0.29
SMG9-207ENST00000598860 PTSQ03393 145 aa13.24□□□□□ -0.29
SMG9-207ENST00000598860 EXOSC9Q06265 439 aaKnown RBP13.24□□□□□ -0.29
SMG9-207ENST00000598860 MTFR1Q15390 333 aa13.24□□□□□ -0.29
SMG9-207ENST00000598860 INTS5Q6P9B9 1019 aaKnown RBP13.24□□□□□ -0.29
SMG9-207ENST00000598860 TNS4Q8IZW8 715 aa13.24□□□□□ -0.29
SMG9-207ENST00000598860 NLGN1Q8N2Q7 840 aa13.24□□□□□ -0.29
SMG9-207ENST00000598860 FMNL2Q96PY5 1086 aa13.24□□□□□ -0.29
SMG9-207ENST00000598860 CCDC87Q9NVE4 849 aa13.24□□□□□ -0.29
SMG9-207ENST00000598860 SPATA31C2B4DYI2 1134 aa13.23□□□□□ -0.29
SMG9-207ENST00000598860 STARD3NLO95772 234 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms