RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 MTHFSP49914 203 aa10.44□□□□□ -0.74
LINC00343-206ENST00000598478 CLN3Q13286 438 aa10.44□□□□□ -0.74
LINC00343-206ENST00000598478 KANK3Q6NY19 840 aa10.44□□□□□ -0.74
LINC00343-206ENST00000598478 ZNF592Q92610 1267 aa10.44□□□□□ -0.74
LINC00343-206ENST00000598478 ZIC5Q96T25 663 aa10.44□□□□□ -0.74
LINC00343-206ENST00000598478 GPR37L1O60883 481 aa10.43□□□□□ -0.74
LINC00343-206ENST00000598478 BRPF1P55201 1214 aaPredicted RBP10.43□□□□□ -0.74
LINC00343-206ENST00000598478 EIF4A2Q14240 407 aaKnown RBP10.43□□□□□ -0.74
LINC00343-206ENST00000598478 CNKSR1Q969H4 720 aa10.43□□□□□ -0.74
LINC00343-206ENST00000598478 GAS2L1Q99501 681 aaPredicted RBP10.43□□□□□ -0.74
LINC00343-206ENST00000598478 GRIP2Q9C0E4 1043 aa10.43□□□□□ -0.74
LINC00343-206ENST00000598478 ZNF330Q9Y3S2 320 aaPredicted RBP10.43□□□□□ -0.74
LINC00343-206ENST00000598478 DNMT3AQ9Y6K1 912 aaPredicted RBP10.43□□□□□ -0.74
LINC00343-206ENST00000598478 CENPFP49454 3210 aa10.42□□□□□ -0.74
LINC00343-206ENST00000598478 H7C1W4 665 aa10.42□□□□□ -0.74
LINC00343-206ENST00000598478 SRGNP10124 158 aa10.42□□□□□ -0.74
LINC00343-206ENST00000598478 CANXP27824 592 aaKnown RBP10.42□□□□□ -0.74
LINC00343-206ENST00000598478 PLEKHO1Q53GL0 409 aaPredicted RBP10.42□□□□□ -0.74
LINC00343-206ENST00000598478 SOGA3Q5TF21 947 aa10.42□□□□□ -0.74
LINC00343-206ENST00000598478 STYK1Q6J9G0 422 aa10.42□□□□□ -0.74
LINC00343-206ENST00000598478 NBPF10Q6P3W6 841 aaKnown RBP10.42□□□□□ -0.74
LINC00343-206ENST00000598478 SAPCD2Q86UD0 394 aa10.42□□□□□ -0.74
LINC00343-206ENST00000598478 NBPF15Q8N660 670 aa10.42□□□□□ -0.74
LINC00343-206ENST00000598478 BANK1Q8NDB2 785 aa10.42□□□□□ -0.74
LINC00343-206ENST00000598478 C7orf43Q8WVR3 580 aa10.42□□□□□ -0.74
LINC00343-206ENST00000598478 GTPBP3Q969Y2 492 aaKnown RBP10.42□□□□□ -0.74
LINC00343-206ENST00000598478 OSBPL3Q9H4L5 887 aa10.42□□□□□ -0.74
LINC00343-206ENST00000598478 ARHGEF10LQ9HCE6 1279 aa10.42□□□□□ -0.74
LINC00343-206ENST00000598478 GJA3Q9Y6H8 435 aa10.42□□□□□ -0.74
LINC00343-206ENST00000598478 FZD9O00144 591 aa10.41□□□□□ -0.74
LINC00343-206ENST00000598478 TRAK2O60296 914 aa10.41□□□□□ -0.74
LINC00343-206ENST00000598478 EPS15P42566 896 aa10.41□□□□□ -0.74
LINC00343-206ENST00000598478 FKBP4Q02790 459 aaKnown RBP eCLIP10.41□□□□□ -0.74
LINC00343-206ENST00000598478 SLC39A6Q13433 755 aa10.41□□□□□ -0.74
LINC00343-206ENST00000598478 CCDC93Q567U6 631 aa10.41□□□□□ -0.74
LINC00343-206ENST00000598478 HABP4Q5JVS0 413 aaKnown RBP10.41□□□□□ -0.74
LINC00343-206ENST00000598478 GPC2Q8N158 579 aa10.41□□□□□ -0.74
LINC00343-206ENST00000598478 MTMR14Q8NCE2 650 aa10.41□□□□□ -0.74
LINC00343-206ENST00000598478 ENAMQ9NRM1 1142 aa10.41□□□□□ -0.74
LINC00343-206ENST00000598478 NDUFB9Q9Y6M9 179 aa10.41□□□□□ -0.74
LINC00343-206ENST00000598478 SCN11AQ9UI33 1791 aa10.4□□□□□ -0.74
LINC00343-206ENST00000598478 SPATA31C2B4DYI2 1134 aa10.4□□□□□ -0.74
LINC00343-206ENST00000598478 CELF2O95319 508 aaKnown RBP10.4□□□□□ -0.74
LINC00343-206ENST00000598478 GPAT2Q6NUI2 795 aa10.4□□□□□ -0.74
LINC00343-206ENST00000598478 MASTLQ96GX5 879 aa10.4□□□□□ -0.74
LINC00343-206ENST00000598478 POLKQ9UBT6 870 aa10.4□□□□□ -0.74
LINC00343-206ENST00000598478 COL4A5P29400 1685 aa10.4□□□□□ -0.74
LINC00343-206ENST00000598478 IARSP41252 1262 aaKnown RBP10.39□□□□□ -0.75
LINC00343-206ENST00000598478 SCNN1DP51172 638 aa10.39□□□□□ -0.75
LINC00343-206ENST00000598478 WDR44Q5JSH3 913 aa10.39□□□□□ -0.75
LINC00343-206ENST00000598478 C1orf141Q5JVX7 400 aa10.39□□□□□ -0.75
LINC00343-206ENST00000598478 CNBD1Q8NA66 436 aa10.39□□□□□ -0.75
LINC00343-206ENST00000598478 TRERF1Q96PN7 1200 aa10.39□□□□□ -0.75
LINC00343-206ENST00000598478 TBC1D2BQ9UPU7 963 aa10.39□□□□□ -0.75
LINC00343-206ENST00000598478 COL6A3P12111 3177 aa10.39□□□□□ -0.75
LINC00343-206ENST00000598478 BRCA2P51587 3418 aa10.39□□□□□ -0.75
LINC00343-206ENST00000598478 HTTP42858 3142 aa10.38□□□□□ -0.75
LINC00343-206ENST00000598478 SCN7AQ01118 1682 aa10.38□□□□□ -0.75
LINC00343-206ENST00000598478 NPHP1O15259 732 aa10.38□□□□□ -0.75
LINC00343-206ENST00000598478 LMOD1P29536 600 aaPredicted RBP10.38□□□□□ -0.75
LINC00343-206ENST00000598478 TNNT2P45379 298 aaPredicted RBP10.38□□□□□ -0.75
LINC00343-206ENST00000598478 EIF5P55010 431 aaKnown RBP10.38□□□□□ -0.75
LINC00343-206ENST00000598478 TAS1R3Q7RTX0 852 aa10.38□□□□□ -0.75
LINC00343-206ENST00000598478 AEBP1Q8IUX7 1158 aa10.38□□□□□ -0.75
LINC00343-206ENST00000598478 SYNE4Q8N205 404 aa10.38□□□□□ -0.75
LINC00343-206ENST00000598478 GCC1Q96CN9 775 aa10.38□□□□□ -0.75
LINC00343-206ENST00000598478 ZNF408Q9H9D4 720 aa10.38□□□□□ -0.75
LINC00343-206ENST00000598478 TIMMDC1Q9NPL8 285 aa10.38□□□□□ -0.75
LINC00343-206ENST00000598478 RAB6BQ9NRW1 208 aa10.38□□□□□ -0.75
LINC00343-206ENST00000598478 BCORQ6W2J9 1755 aa10.37□□□□□ -0.75
LINC00343-206ENST00000598478 AMOTQ4VCS5 1084 aa10.37□□□□□ -0.75
LINC00343-206ENST00000598478 GLIS2Q9BZE0 524 aaPredicted RBP10.37□□□□□ -0.75
LINC00343-206ENST00000598478 LGR6Q9HBX8 967 aa10.37□□□□□ -0.75
LINC00343-206ENST00000598478 CUL9Q8IWT3 2517 aa10.36□□□□□ -0.75
LINC00343-206ENST00000598478 APBB1O00213 710 aa10.36□□□□□ -0.75
LINC00343-206ENST00000598478 IGHA1P01876 353 aa10.36□□□□□ -0.75
LINC00343-206ENST00000598478 BCRP11274 1271 aa10.36□□□□□ -0.75
LINC00343-206ENST00000598478 ST5P78524 1137 aa10.36□□□□□ -0.75
LINC00343-206ENST00000598478 USP50Q70EL3 339 aaPredicted RBP10.36□□□□□ -0.75
LINC00343-206ENST00000598478 HHIPL1Q96JK4 782 aa10.36□□□□□ -0.75
LINC00343-206ENST00000598478 SETDB2Q96T68 719 aa10.36□□□□□ -0.75
LINC00343-206ENST00000598478 NUCKS1Q9H1E3 243 aaKnown RBP10.36□□□□□ -0.75
LINC00343-206ENST00000598478 SLC52A2Q9HAB3 445 aa10.36□□□□□ -0.75
LINC00343-206ENST00000598478 SNRKQ9NRH2 765 aa10.36□□□□□ -0.75
LINC00343-206ENST00000598478 TRPA1O75762 1119 aa10.35□□□□□ -0.75
LINC00343-206ENST00000598478 GNRH1P01148 92 aa10.35□□□□□ -0.75
LINC00343-206ENST00000598478 F11P03951 625 aa10.35□□□□□ -0.75
LINC00343-206ENST00000598478 FXR1P51114 621 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC00343-206ENST00000598478 EIF6P56537 245 aaKnown RBP10.35□□□□□ -0.75
LINC00343-206ENST00000598478 FOXK2Q01167 660 aa10.35□□□□□ -0.75
LINC00343-206ENST00000598478 NOGQ13253 232 aa10.35□□□□□ -0.75
LINC00343-206ENST00000598478 RTKN2Q8IZC4 609 aa10.35□□□□□ -0.75
LINC00343-206ENST00000598478 JDP2Q8WYK2 163 aa10.35□□□□□ -0.75
LINC00343-206ENST00000598478 ACDQ96AP0 544 aa10.35□□□□□ -0.75
LINC00343-206ENST00000598478 RANBP2P49792 3224 aaKnown RBP10.35□□□□□ -0.75
LINC00343-206ENST00000598478 A0A087WZG4 1122 aa10.34□□□□□ -0.75
LINC00343-206ENST00000598478 NPR1P16066 1061 aa10.34□□□□□ -0.75
LINC00343-206ENST00000598478 MX2P20592 715 aa10.34□□□□□ -0.75
LINC00343-206ENST00000598478 DLK2Q6UY11 383 aa10.34□□□□□ -0.75
LINC00343-206ENST00000598478 CTU1Q7Z7A3 348 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms