RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 SPDYE6P0CI01 402 aa11.22□□□□□ -0.61
ZNF548-206ENST00000597047 ADD2P35612 726 aa11.22□□□□□ -0.61
ZNF548-206ENST00000597047 HHIPL2Q6UWX4 724 aa11.22□□□□□ -0.61
ZNF548-206ENST00000597047 ADGRA1Q86SQ6 560 aa11.22□□□□□ -0.61
ZNF548-206ENST00000597047 USP48Q86UV5 1035 aa11.22□□□□□ -0.61
ZNF548-206ENST00000597047 TEX11Q8IYF3 940 aa11.22□□□□□ -0.61
ZNF548-206ENST00000597047 SH3RF3Q8TEJ3 882 aaPredicted RBP11.22□□□□□ -0.61
ZNF548-206ENST00000597047 ZNF384Q8TF68 577 aa11.22□□□□□ -0.61
ZNF548-206ENST00000597047 SEC62Q99442 399 aaKnown RBP11.22□□□□□ -0.61
ZNF548-206ENST00000597047 ARMT1Q9H993 441 aa11.22□□□□□ -0.61
ZNF548-206ENST00000597047 DIAPH3Q9NSV4 1193 aa11.22□□□□□ -0.61
ZNF548-206ENST00000597047 GGA3Q9NZ52 723 aa11.22□□□□□ -0.61
ZNF548-206ENST00000597047 ZNF70Q9UC06 446 aaPredicted RBP11.22□□□□□ -0.61
ZNF548-206ENST00000597047 MYH7P12883 1935 aa11.21□□□□□ -0.61
ZNF548-206ENST00000597047 MBD4O95243 580 aa11.21□□□□□ -0.61
ZNF548-206ENST00000597047 APPP05067 770 aa11.21□□□□□ -0.61
ZNF548-206ENST00000597047 USP5P45974 858 aa11.21□□□□□ -0.61
ZNF548-206ENST00000597047 HDLBPQ00341 1268 aaKnown RBP11.21□□□□□ -0.61
ZNF548-206ENST00000597047 TCP10Q12799 353 aa11.21□□□□□ -0.61
ZNF548-206ENST00000597047 NMIQ13287 307 aaPredicted RBP11.21□□□□□ -0.61
ZNF548-206ENST00000597047 SLC4A8Q2Y0W8 1093 aa11.21□□□□□ -0.61
ZNF548-206ENST00000597047 PRAMEF18Q5VWM3 479 aa11.21□□□□□ -0.61
ZNF548-206ENST00000597047 APOBEC3HQ6NTF7 200 aaKnown RBP11.21□□□□□ -0.61
ZNF548-206ENST00000597047 CDC42EP5Q6NZY7 148 aa11.21□□□□□ -0.61
ZNF548-206ENST00000597047 CWC27Q6UX04 472 aaKnown RBP11.21□□□□□ -0.61
ZNF548-206ENST00000597047 DLK2Q6UY11 383 aa11.21□□□□□ -0.61
ZNF548-206ENST00000597047 ZSCAN29Q8IWY8 852 aaPredicted RBP11.21□□□□□ -0.61
ZNF548-206ENST00000597047 AIDAQ96BJ3 306 aa11.21□□□□□ -0.61
ZNF548-206ENST00000597047 ZDHHC15Q96MV8 337 aa11.21□□□□□ -0.61
ZNF548-206ENST00000597047 ZNF408Q9H9D4 720 aa11.21□□□□□ -0.61
ZNF548-206ENST00000597047 POLR2AP24928 1970 aaKnown RBP11.21□□□□□ -0.62
ZNF548-206ENST00000597047 ADM5C9JUS6 153 aa11.2□□□□□ -0.62
ZNF548-206ENST00000597047 KIF3CO14782 793 aa11.2□□□□□ -0.62
ZNF548-206ENST00000597047 ZFYP08048 801 aaPredicted RBP11.2□□□□□ -0.62
ZNF548-206ENST00000597047 PRKG1Q13976 671 aa11.2□□□□□ -0.62
ZNF548-206ENST00000597047 CCDC129Q6ZRS4 1044 aa11.2□□□□□ -0.62
ZNF548-206ENST00000597047 MAPKAPK5Q8IW41 473 aa11.2□□□□□ -0.62
ZNF548-206ENST00000597047 TGFBRAP1Q8WUH2 860 aa11.2□□□□□ -0.62
ZNF548-206ENST00000597047 FAM227BQ96M60 508 aa11.2□□□□□ -0.62
ZNF548-206ENST00000597047 GLIS2Q9BZE0 524 aaPredicted RBP11.2□□□□□ -0.62
ZNF548-206ENST00000597047 PUS7LQ9H0K6 701 aaKnown RBP11.2□□□□□ -0.62
ZNF548-206ENST00000597047 SAP30BPQ9UHR5 308 aaKnown RBP11.2□□□□□ -0.62
ZNF548-206ENST00000597047 DOCK2Q92608 1830 aa11.2□□□□□ -0.62
ZNF548-206ENST00000597047 GPR75-ASB3A0A0A6YYF3 556 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 TCRBV5S4A2TA0A5A2 114 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 M0R2C6 588 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 ZBTB22O15209 634 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 TNNI2P48788 182 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 MMP14P50281 582 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 UBE3CQ15386 1083 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 CHADLQ6NUI6 762 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 KRT26Q7Z3Y9 468 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 LDHDQ86WU2 507 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 SULF1Q8IWU6 871 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 LCORLQ8N3X6 602 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 MTMR14Q8NCE2 650 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 APPBP2Q92624 585 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 OSBP2Q969R2 916 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 MRIQ9BWK5 157 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 SLC4A4Q9Y6R1 1079 aa11.19□□□□□ -0.62
ZNF548-206ENST00000597047 MAST2Q6P0Q8 1798 aa11.18□□□□□ -0.62
ZNF548-206ENST00000597047 GAKO14976 1311 aa11.18□□□□□ -0.62
ZNF548-206ENST00000597047 A0A0D9SFI3 127 aa11.18□□□□□ -0.62
ZNF548-206ENST00000597047 HIP1O00291 1037 aa11.18□□□□□ -0.62
ZNF548-206ENST00000597047 TRAF5O00463 557 aa11.18□□□□□ -0.62
ZNF548-206ENST00000597047 PRKAB2O43741 272 aa11.18□□□□□ -0.62
ZNF548-206ENST00000597047 PLCG2P16885 1265 aa11.18□□□□□ -0.62
ZNF548-206ENST00000597047 FMR1Q06787 632 aaKnown RBP eCLIP11.18□□□□□ -0.62
ZNF548-206ENST00000597047 NFIAQ12857 509 aa11.18□□□□□ -0.62
ZNF548-206ENST00000597047 SPDYE2Q495Y8 402 aa11.18□□□□□ -0.62
ZNF548-206ENST00000597047 STK11IPQ8N1F8 1099 aa11.18□□□□□ -0.62
ZNF548-206ENST00000597047 SDR42E1Q8WUS8 393 aa11.18□□□□□ -0.62
ZNF548-206ENST00000597047 FAM163AQ96GL9 167 aaPredicted RBP11.18□□□□□ -0.62
ZNF548-206ENST00000597047 CRNKL1Q9BZJ0 848 aaKnown RBP11.18□□□□□ -0.62
ZNF548-206ENST00000597047 CEP350Q5VT06 3117 aa11.17□□□□□ -0.62
ZNF548-206ENST00000597047 GPAA1O43292 621 aa11.17□□□□□ -0.62
ZNF548-206ENST00000597047 TTLL12Q14166 644 aaPredicted RBP11.17□□□□□ -0.62
ZNF548-206ENST00000597047 RASA3Q14644 834 aa11.17□□□□□ -0.62
ZNF548-206ENST00000597047 MCMDC2Q4G0Z9 681 aa11.17□□□□□ -0.62
ZNF548-206ENST00000597047 ZMYM1Q5SVZ6 1142 aa11.17□□□□□ -0.62
ZNF548-206ENST00000597047 CASC1Q6TDU7 716 aa11.17□□□□□ -0.62
ZNF548-206ENST00000597047 CDC37L1Q7L3B6 337 aa11.17□□□□□ -0.62
ZNF548-206ENST00000597047 APOBEC3FQ8IUX4 373 aaKnown RBP11.17□□□□□ -0.62
ZNF548-206ENST00000597047 ZFPM1Q8IX07 1006 aa11.17□□□□□ -0.62
ZNF548-206ENST00000597047 ZBED3Q96IU2 234 aaPredicted RBP11.17□□□□□ -0.62
ZNF548-206ENST00000597047 TMEM39BQ9GZU3 492 aa11.17□□□□□ -0.62
ZNF548-206ENST00000597047 DEFB129Q9H1M3 183 aa11.17□□□□□ -0.62
ZNF548-206ENST00000597047 TOMM70O94826 608 aa11.16□□□□□ -0.62
ZNF548-206ENST00000597047 POLR3DP05423 398 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-206ENST00000597047 CHMLP26374 656 aa11.16□□□□□ -0.62
ZNF548-206ENST00000597047 RHBDL3P58872 404 aa11.16□□□□□ -0.62
ZNF548-206ENST00000597047 PPP4CP60510 307 aa11.16□□□□□ -0.62
ZNF548-206ENST00000597047 TNFAIP1Q13829 316 aa11.16□□□□□ -0.62
ZNF548-206ENST00000597047 BMP2KLQ5H9B9 411 aa11.16□□□□□ -0.62
ZNF548-206ENST00000597047 SMC1BQ8NDV3 1235 aa11.16□□□□□ -0.62
ZNF548-206ENST00000597047 ZC3H15Q8WU90 426 aaKnown RBP11.16□□□□□ -0.62
ZNF548-206ENST00000597047 RUFY2Q8WXA3 655 aa11.16□□□□□ -0.62
ZNF548-206ENST00000597047 DDRGK1Q96HY6 314 aa11.16□□□□□ -0.62
ZNF548-206ENST00000597047 RIOK1Q9BRS2 568 aaKnown RBP11.16□□□□□ -0.62
ZNF548-206ENST00000597047 DDX4Q9NQI0 724 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms