RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 A0A1W2PQD8 194 aa17.77■□□□□ 0.44
ZNF541-205ENST00000595558 ATP6V1AP38606 617 aa17.77■□□□□ 0.44
ZNF541-205ENST00000595558 PIP4K2BP78356 416 aa17.77■□□□□ 0.44
ZNF541-205ENST00000595558 TRIM28Q13263 835 aaKnown RBP17.77■□□□□ 0.44
ZNF541-205ENST00000595558 NCAPHQ15003 741 aa17.77■□□□□ 0.44
ZNF541-205ENST00000595558 FAM182BQ5T319 152 aa17.77■□□□□ 0.44
ZNF541-205ENST00000595558 MB21D2Q8IYB1 491 aaPredicted RBP17.77■□□□□ 0.44
ZNF541-205ENST00000595558 BCL9O00512 1426 aa17.77■□□□□ 0.44
ZNF541-205ENST00000595558 SMIM22K7EJ46 135 aa17.77■□□□□ 0.43
ZNF541-205ENST00000595558 LMOD1P29536 600 aaPredicted RBP17.77■□□□□ 0.43
ZNF541-205ENST00000595558 AXDND1Q5T1B0 1012 aaPredicted RBP17.77■□□□□ 0.43
ZNF541-205ENST00000595558 FBXO38Q6PIJ6 1188 aa17.77■□□□□ 0.43
ZNF541-205ENST00000595558 NBPF3Q9H094 633 aa17.77■□□□□ 0.43
ZNF541-205ENST00000595558 OSBPL5Q9H0X9 879 aaPredicted RBP17.77■□□□□ 0.43
ZNF541-205ENST00000595558 RIC1Q4ADV7 1423 aa17.77■□□□□ 0.43
ZNF541-205ENST00000595558 ANKRD18BA2A2Z9 1011 aa17.76■□□□□ 0.43
ZNF541-205ENST00000595558 SLC3A2P08195 630 aaKnown RBP17.76■□□□□ 0.43
ZNF541-205ENST00000595558 PFKFB1P16118 471 aa17.76■□□□□ 0.43
ZNF541-205ENST00000595558 ITPK1Q13572 414 aa17.76■□□□□ 0.43
ZNF541-205ENST00000595558 IMMTQ16891 758 aaKnown RBP17.76■□□□□ 0.43
ZNF541-205ENST00000595558 CCDC102BQ68D86 513 aa17.76■□□□□ 0.43
ZNF541-205ENST00000595558 POLR3EQ9NVU0 708 aa17.76■□□□□ 0.43
ZNF541-205ENST00000595558 MARCH10Q8NA82 808 aaPredicted RBP17.75■□□□□ 0.43
ZNF541-205ENST00000595558 PPP1R13BQ96KQ4 1090 aa17.75■□□□□ 0.43
ZNF541-205ENST00000595558 MYL10Q9BUA6 226 aa17.75■□□□□ 0.43
ZNF541-205ENST00000595558 HSD3B7Q9H2F3 369 aa17.75■□□□□ 0.43
ZNF541-205ENST00000595558 AKAP2Q9Y2D5 859 aa17.75■□□□□ 0.43
ZNF541-205ENST00000595558 KIF23Q02241 960 aaPredicted RBP17.75■□□□□ 0.43
ZNF541-205ENST00000595558 GOLGA8FQ08AF8 430 aa17.75■□□□□ 0.43
ZNF541-205ENST00000595558 GOLGA8DPQ0D2H9 430 aa17.75■□□□□ 0.43
ZNF541-205ENST00000595558 ZRSR1Q15695 479 aaKnown RBP17.75■□□□□ 0.43
ZNF541-205ENST00000595558 INTS5Q6P9B9 1019 aaKnown RBP17.75■□□□□ 0.43
ZNF541-205ENST00000595558 SYT10Q6XYQ8 523 aa17.75■□□□□ 0.43
ZNF541-205ENST00000595558 VGLL2Q8N8G2 317 aa17.75■□□□□ 0.43
ZNF541-205ENST00000595558 KCNG4Q8TDN1 519 aa17.75■□□□□ 0.43
ZNF541-205ENST00000595558 CPLX1O14810 134 aa17.74■□□□□ 0.43
ZNF541-205ENST00000595558 CRKLP46109 303 aaKnown RBP17.74■□□□□ 0.43
ZNF541-205ENST00000595558 ANO1Q5XXA6 986 aa17.74■□□□□ 0.43
ZNF541-205ENST00000595558 BICDL1Q6ZP65 573 aa17.74■□□□□ 0.43
ZNF541-205ENST00000595558 DPF2Q92785 391 aa17.74■□□□□ 0.43
ZNF541-205ENST00000595558 TEX13AQ9BXU3 409 aaPredicted RBP17.74■□□□□ 0.43
ZNF541-205ENST00000595558 ABCA3Q99758 1704 aa17.74■□□□□ 0.43
ZNF541-205ENST00000595558 PDE8BO95263 885 aa17.74■□□□□ 0.43
ZNF541-205ENST00000595558 BCAMP50895 628 aa17.74■□□□□ 0.43
ZNF541-205ENST00000595558 SLC51AQ86UW1 340 aa17.74■□□□□ 0.43
ZNF541-205ENST00000595558 TBC1D10CQ8IV04 446 aa17.74■□□□□ 0.43
ZNF541-205ENST00000595558 FBXL16Q8N461 479 aa17.74■□□□□ 0.43
ZNF541-205ENST00000595558 ZNF532Q9HCE3 1301 aa17.74■□□□□ 0.43
ZNF541-205ENST00000595558 SLIT2O94813 1529 aa17.73■□□□□ 0.43
ZNF541-205ENST00000595558 YEATS4O95619 227 aa17.73■□□□□ 0.43
ZNF541-205ENST00000595558 GSDMDP57764 484 aa17.73■□□□□ 0.43
ZNF541-205ENST00000595558 NLRP12P59046 1061 aa17.73■□□□□ 0.43
ZNF541-205ENST00000595558 SYNE3Q6ZMZ3 975 aa17.73■□□□□ 0.43
ZNF541-205ENST00000595558 ST7Q9NRC1 585 aa17.73■□□□□ 0.43
ZNF541-205ENST00000595558 MORC2Q9Y6X9 1032 aaPredicted RBP17.73■□□□□ 0.43
ZNF541-205ENST00000595558 PRKAB2O43741 272 aa17.73■□□□□ 0.43
ZNF541-205ENST00000595558 PHKBQ93100 1093 aa17.73■□□□□ 0.43
ZNF541-205ENST00000595558 DDB1Q16531 1140 aa17.72■□□□□ 0.43
ZNF541-205ENST00000595558 ERCC6LQ2NKX8 1250 aa17.72■□□□□ 0.43
ZNF541-205ENST00000595558 C3orf67Q6ZVT6 689 aa17.72■□□□□ 0.43
ZNF541-205ENST00000595558 CYB5R4Q7L1T6 521 aa17.72■□□□□ 0.43
ZNF541-205ENST00000595558 ZNF397Q8NF99 534 aaPredicted RBP17.72■□□□□ 0.43
ZNF541-205ENST00000595558 CLIC6Q96NY7 704 aa17.72■□□□□ 0.43
ZNF541-205ENST00000595558 PLA2G12BQ9BX93 195 aa17.72■□□□□ 0.43
ZNF541-205ENST00000595558 TACC3Q9Y6A5 838 aa17.72■□□□□ 0.43
ZNF541-205ENST00000595558 SLU7O95391 586 aaKnown RBP17.72■□□□□ 0.43
ZNF541-205ENST00000595558 SFPQP23246 707 aaKnown RBP eCLIP17.72■□□□□ 0.43
ZNF541-205ENST00000595558 NCOA7Q8NI08 942 aa17.72■□□□□ 0.43
ZNF541-205ENST00000595558 APPBP2Q92624 585 aa17.72■□□□□ 0.43
ZNF541-205ENST00000595558 ERO1AQ96HE7 468 aa17.72■□□□□ 0.43
ZNF541-205ENST00000595558 ZNF446Q9NWS9 450 aa17.72■□□□□ 0.43
ZNF541-205ENST00000595558 MYO5AQ9Y4I1 1855 aaKnown RBP17.72■□□□□ 0.43
ZNF541-205ENST00000595558 ZNF213O14771 459 aa17.71■□□□□ 0.43
ZNF541-205ENST00000595558 FANCCQ00597 558 aa17.71■□□□□ 0.43
ZNF541-205ENST00000595558 PNOCQ13519 176 aa17.71■□□□□ 0.43
ZNF541-205ENST00000595558 RALYLQ86SE5 291 aaKnown RBP17.71■□□□□ 0.43
ZNF541-205ENST00000595558 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.71■□□□□ 0.43
ZNF541-205ENST00000595558 BPIFA3Q9BQP9 254 aa17.71■□□□□ 0.43
ZNF541-205ENST00000595558 IMPACTQ9P2X3 320 aa17.71■□□□□ 0.43
ZNF541-205ENST00000595558 ITGB4P16144 1822 aa17.71■□□□□ 0.43
ZNF541-205ENST00000595558 PAPPAQ13219 1627 aa17.71■□□□□ 0.43
ZNF541-205ENST00000595558 B4E1Z4 1266 aa17.71■□□□□ 0.43
ZNF541-205ENST00000595558 PDE8AO60658 829 aa17.71■□□□□ 0.43
ZNF541-205ENST00000595558 CTDSPL2Q05D32 466 aa17.71■□□□□ 0.43
ZNF541-205ENST00000595558 RASGRF1Q13972 1273 aa17.71■□□□□ 0.43
ZNF541-205ENST00000595558 HSP90AA4PQ58FG1 418 aa17.71■□□□□ 0.43
ZNF541-205ENST00000595558 SHC4Q6S5L8 630 aa17.71■□□□□ 0.43
ZNF541-205ENST00000595558 KCND1Q9NSA2 647 aa17.71■□□□□ 0.43
ZNF541-205ENST00000595558 FANCGO15287 622 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 CMA1P23946 247 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 CDC27P30260 824 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 BRAPQ7Z569 592 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 ZNF34Q8IZ26 560 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 MIGA1Q8NAN2 632 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 ZKSCAN3Q9BRR0 538 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 NIP7Q9Y221 180 aaKnown RBP eCLIP17.7■□□□□ 0.42
ZNF541-205ENST00000595558 LOC102724428A0A0B4J2F2 783 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 DHX16O60231 1041 aaKnown RBP17.7■□□□□ 0.42
ZNF541-205ENST00000595558 PDE6AP16499 860 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 ADD2P35612 726 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms