RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CCDC66A2RUB6 948 aa19.91■□□□□ 0.78
SHKBP1-205ENST00000594973 RFC4P35249 363 aa19.91■□□□□ 0.78
SHKBP1-205ENST00000594973 KRT85P78386 507 aa19.91■□□□□ 0.78
SHKBP1-205ENST00000594973 TPTE2Q6XPS3 522 aa19.91■□□□□ 0.78
SHKBP1-205ENST00000594973 VPS37DQ86XT2 251 aa19.91■□□□□ 0.78
SHKBP1-205ENST00000594973 NHSQ6T4R5 1651 aa19.91■□□□□ 0.78
SHKBP1-205ENST00000594973 KDM4AO75164 1064 aa19.91■□□□□ 0.78
SHKBP1-205ENST00000594973 MIGA1Q8NAN2 632 aa19.91■□□□□ 0.78
SHKBP1-205ENST00000594973 NKX2-3Q8TAU0 364 aa19.91■□□□□ 0.78
SHKBP1-205ENST00000594973 TFIP11Q9UBB9 837 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-205ENST00000594973 SCN7AQ01118 1682 aa19.9■□□□□ 0.78
SHKBP1-205ENST00000594973 CCDC183Q5T5S1 534 aa19.9■□□□□ 0.78
SHKBP1-205ENST00000594973 FAM196AQ6ZSG2 479 aa19.9■□□□□ 0.78
SHKBP1-205ENST00000594973 TRPC5Q9UL62 973 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-205ENST00000594973 KLF18A0A0U1RQI7 1052 aa19.9■□□□□ 0.78
SHKBP1-205ENST00000594973 RGL2O15211 777 aa19.9■□□□□ 0.78
SHKBP1-205ENST00000594973 PRKAB2O43741 272 aa19.9■□□□□ 0.78
SHKBP1-205ENST00000594973 CDK11BP21127 795 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-205ENST00000594973 TRAPPC3LQ5T215 181 aa19.9■□□□□ 0.78
SHKBP1-205ENST00000594973 EPB41L4AQ9HCS5 686 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-205ENST00000594973 PATL2C9JE40 543 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-205ENST00000594973 RPS8P62241 208 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-205ENST00000594973 UBE4AQ14139 1066 aa19.89■□□□□ 0.77
SHKBP1-205ENST00000594973 CAVIN4Q5BKX8 364 aa19.89■□□□□ 0.77
SHKBP1-205ENST00000594973 IFNL3Q8IZI9 196 aa19.89■□□□□ 0.77
SHKBP1-205ENST00000594973 FBXL16Q8N461 479 aa19.89■□□□□ 0.77
SHKBP1-205ENST00000594973 NAPBQ9H115 298 aa19.89■□□□□ 0.77
SHKBP1-205ENST00000594973 INCENPQ9NQS7 918 aa19.89■□□□□ 0.77
SHKBP1-205ENST00000594973 GNL3LQ9NVN8 582 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-205ENST00000594973 GOLGA8BA8MQT2 603 aa19.88■□□□□ 0.77
SHKBP1-205ENST00000594973 SLFN14P0C7P3 912 aa19.88■□□□□ 0.77
SHKBP1-205ENST00000594973 TTC6Q86TZ1 520 aa19.88■□□□□ 0.77
SHKBP1-205ENST00000594973 LCORLQ8N3X6 602 aa19.88■□□□□ 0.77
SHKBP1-205ENST00000594973 LRRC4BQ9NT99 713 aa19.88■□□□□ 0.77
SHKBP1-205ENST00000594973 KLRK1P26718 216 aa19.88■□□□□ 0.77
SHKBP1-205ENST00000594973 FAM193AP78312 1265 aa19.88■□□□□ 0.77
SHKBP1-205ENST00000594973 RAI14Q9P0K7 980 aa19.88■□□□□ 0.77
SHKBP1-205ENST00000594973 DDX41Q9UJV9 622 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-205ENST00000594973 B4E1Z4 1266 aa19.87■□□□□ 0.77
SHKBP1-205ENST00000594973 CYB5R4Q7L1T6 521 aa19.87■□□□□ 0.77
SHKBP1-205ENST00000594973 MORC2Q9Y6X9 1032 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-205ENST00000594973 ZNF804BA4D1E1 1349 aa19.87■□□□□ 0.77
SHKBP1-205ENST00000594973 GOLGA6L6A8MZA4 724 aa19.87■□□□□ 0.77
SHKBP1-205ENST00000594973 ONECUT3O60422 494 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-205ENST00000594973 EVCP57679 992 aa19.87■□□□□ 0.77
SHKBP1-205ENST00000594973 CTDSPL2Q05D32 466 aa19.87■□□□□ 0.77
SHKBP1-205ENST00000594973 NCBP1Q09161 790 aaKnown RBP19.87■□□□□ 0.77
SHKBP1-205ENST00000594973 SLC4A4Q9Y6R1 1079 aa19.87■□□□□ 0.77
SHKBP1-205ENST00000594973 GSG1L2A8MUP6 293 aa19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 CYP7A1P22680 504 aa19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 GUCY1B3Q02153 619 aa19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 RESTQ13127 1097 aa19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 ADGRA1Q86SQ6 560 aa19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 MPNDQ8N594 471 aa19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 FAM84BQ96KN1 310 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 NEDD4P46934 1319 aa19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 IGSF3O75054 1194 aa19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 TDO2P48775 406 aa19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 STK11IPQ8N1F8 1099 aa19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 SPATA32Q96LK8 384 aa19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 QTRT2Q9H974 415 aaKnown RBP19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 SALL1Q9NSC2 1324 aa19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 HPS5Q9UPZ3 1129 aa19.86■□□□□ 0.77
SHKBP1-205ENST00000594973 COL1A1P02452 1464 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-205ENST00000594973 ALX1Q15699 326 aa19.85■□□□□ 0.77
SHKBP1-205ENST00000594973 SCAND2PQ9GZW5 306 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-205ENST00000594973 TFCP2L1Q9NZI6 479 aa19.85■□□□□ 0.77
SHKBP1-205ENST00000594973 FDPSP14324 419 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-205ENST00000594973 NFIXQ14938 502 aa19.84■□□□□ 0.77
SHKBP1-205ENST00000594973 KCNF1Q9H3M0 494 aa19.84■□□□□ 0.77
SHKBP1-205ENST00000594973 ANGEL1Q9UNK9 670 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-205ENST00000594973 CARMIL3Q8ND23 1372 aa19.84■□□□□ 0.77
SHKBP1-205ENST00000594973 IRX5P78411 483 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-205ENST00000594973 CEBPZQ03701 1054 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-205ENST00000594973 CREBRFQ8IUR6 639 aa19.84■□□□□ 0.77
SHKBP1-205ENST00000594973 NACAP1Q9BZK3 213 aa19.84■□□□□ 0.77
SHKBP1-205ENST00000594973 ZSCAN16Q9H4T2 348 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-205ENST00000594973 SENP2Q9HC62 589 aa19.84■□□□□ 0.77
SHKBP1-205ENST00000594973 PYCARDQ9ULZ3 195 aa19.84■□□□□ 0.77
SHKBP1-205ENST00000594973 DOCK2Q92608 1830 aa19.83■□□□□ 0.77
SHKBP1-205ENST00000594973 WDR19Q8NEZ3 1342 aa19.83■□□□□ 0.77
SHKBP1-205ENST00000594973 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.83■□□□□ 0.76
SHKBP1-205ENST00000594973 SMTNL1A8MU46 457 aa19.83■□□□□ 0.76
SHKBP1-205ENST00000594973 CPLX1O14810 134 aa19.83■□□□□ 0.76
SHKBP1-205ENST00000594973 RXRAP19793 462 aa19.83■□□□□ 0.76
SHKBP1-205ENST00000594973 NAA16Q6N069 864 aaPredicted RBP19.83■□□□□ 0.76
SHKBP1-205ENST00000594973 SLC51AQ86UW1 340 aa19.83■□□□□ 0.76
SHKBP1-205ENST00000594973 LEO1Q8WVC0 666 aaPredicted RBP19.83■□□□□ 0.76
SHKBP1-205ENST00000594973 GOLGA6L4A6NEF3 574 aa19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 DHX16O60231 1041 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 GNAT2P19087 354 aa19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 TM4SF1P30408 202 aa19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 SDR42E1Q8WUS8 393 aa19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 CHMP4CQ96CF2 233 aa19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 TIGD1Q96MW7 591 aa19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 TOMM22Q9NS69 142 aa19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 CASZ1Q86V15 1759 aa19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 C4BP0C0L5 1744 aa19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 ELP1O95163 1332 aa19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 PNPLA7Q6ZV29 1317 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms