RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 BTDP43251 543 aa11.23□□□□□ -0.61
ZNF548-203ENST00000594668 UBE3CQ15386 1083 aa11.23□□□□□ -0.61
ZNF548-203ENST00000594668 CDC42EP5Q6NZY7 148 aa11.23□□□□□ -0.61
ZNF548-203ENST00000594668 SLF2Q8IX21 1173 aa11.23□□□□□ -0.61
ZNF548-203ENST00000594668 MIGA1Q8NAN2 632 aa11.23□□□□□ -0.61
ZNF548-203ENST00000594668 TDRD3Q9H7E2 651 aaKnown RBP11.23□□□□□ -0.61
ZNF548-203ENST00000594668 AATFQ9NY61 560 aaKnown RBP eCLIP11.23□□□□□ -0.61
ZNF548-203ENST00000594668 SCAF8Q9UPN6 1271 aaKnown RBP11.23□□□□□ -0.61
ZNF548-203ENST00000594668 CLRN2A0PK11 232 aa11.22□□□□□ -0.61
ZNF548-203ENST00000594668 PPP4CP60510 307 aa11.22□□□□□ -0.61
ZNF548-203ENST00000594668 DYNLL1P63167 89 aaKnown RBP11.22□□□□□ -0.61
ZNF548-203ENST00000594668 ZSCAN25Q6NSZ9 544 aa11.22□□□□□ -0.61
ZNF548-203ENST00000594668 PNMA8AQ86V59 439 aaPredicted RBP11.22□□□□□ -0.61
ZNF548-203ENST00000594668 SEC62Q99442 399 aaKnown RBP11.22□□□□□ -0.61
ZNF548-203ENST00000594668 PUS7LQ9H0K6 701 aaKnown RBP11.22□□□□□ -0.61
ZNF548-203ENST00000594668 USP40Q9NVE5 1235 aa11.22□□□□□ -0.61
ZNF548-203ENST00000594668 ZNF70Q9UC06 446 aaPredicted RBP11.22□□□□□ -0.61
ZNF548-203ENST00000594668 PGAP2Q9UHJ9 254 aa11.22□□□□□ -0.61
ZNF548-203ENST00000594668 TRPM7Q96QT4 1865 aa11.21□□□□□ -0.61
ZNF548-203ENST00000594668 ZFYP08048 801 aaPredicted RBP11.21□□□□□ -0.61
ZNF548-203ENST00000594668 CACNB3P54284 484 aa11.21□□□□□ -0.61
ZNF548-203ENST00000594668 RHBDL3P58872 404 aa11.21□□□□□ -0.61
ZNF548-203ENST00000594668 SPDYE2Q495Y8 402 aa11.21□□□□□ -0.61
ZNF548-203ENST00000594668 BMP2KLQ5H9B9 411 aa11.21□□□□□ -0.61
ZNF548-203ENST00000594668 ZMYM1Q5SVZ6 1142 aa11.21□□□□□ -0.61
ZNF548-203ENST00000594668 ANGEL2Q5VTE6 544 aaKnown RBP11.21□□□□□ -0.61
ZNF548-203ENST00000594668 TMED8Q6PL24 325 aaPredicted RBP11.21□□□□□ -0.61
ZNF548-203ENST00000594668 SH3RF3Q8TEJ3 882 aaPredicted RBP11.21□□□□□ -0.61
ZNF548-203ENST00000594668 OSBP2Q969R2 916 aa11.21□□□□□ -0.61
ZNF548-203ENST00000594668 FAM227BQ96M60 508 aa11.21□□□□□ -0.61
ZNF548-203ENST00000594668 RIOK1Q9BRS2 568 aaKnown RBP11.21□□□□□ -0.61
ZNF548-203ENST00000594668 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.61
ZNF548-203ENST00000594668 MAGEB6P1A0A0J9YX57 407 aa11.2□□□□□ -0.62
ZNF548-203ENST00000594668 M0R2C6 588 aa11.2□□□□□ -0.62
ZNF548-203ENST00000594668 MYO1BO43795 1136 aa11.2□□□□□ -0.62
ZNF548-203ENST00000594668 BAG3O95817 575 aa11.2□□□□□ -0.62
ZNF548-203ENST00000594668 DLK2Q6UY11 383 aa11.2□□□□□ -0.62
ZNF548-203ENST00000594668 LDHDQ86WU2 507 aa11.2□□□□□ -0.62
ZNF548-203ENST00000594668 ZC3H15Q8WU90 426 aaKnown RBP11.2□□□□□ -0.62
ZNF548-203ENST00000594668 APPBP2Q92624 585 aa11.2□□□□□ -0.62
ZNF548-203ENST00000594668 GGA3Q9NZ52 723 aa11.2□□□□□ -0.62
ZNF548-203ENST00000594668 NAV1Q8NEY1 1877 aa11.2□□□□□ -0.62
ZNF548-203ENST00000594668 RFX7Q2KHR2 1363 aa11.19□□□□□ -0.62
ZNF548-203ENST00000594668 A0A0D9SFI3 127 aa11.19□□□□□ -0.62
ZNF548-203ENST00000594668 TCP10L2B9ZVM9 353 aa11.19□□□□□ -0.62
ZNF548-203ENST00000594668 MBD4O95243 580 aa11.19□□□□□ -0.62
ZNF548-203ENST00000594668 CHMLP26374 656 aa11.19□□□□□ -0.62
ZNF548-203ENST00000594668 NFIAQ12857 509 aa11.19□□□□□ -0.62
ZNF548-203ENST00000594668 NMIQ13287 307 aaPredicted RBP11.19□□□□□ -0.62
ZNF548-203ENST00000594668 LRRFIP1Q32MZ4 808 aaKnown RBP11.19□□□□□ -0.62
ZNF548-203ENST00000594668 MAP1SQ66K74 1059 aaPredicted RBP11.19□□□□□ -0.62
ZNF548-203ENST00000594668 CWC27Q6UX04 472 aaKnown RBP11.19□□□□□ -0.62
ZNF548-203ENST00000594668 TICAM2Q86XR7 235 aa11.19□□□□□ -0.62
ZNF548-203ENST00000594668 LCORLQ8N3X6 602 aa11.19□□□□□ -0.62
ZNF548-203ENST00000594668 NOL10Q9BSC4 688 aaKnown RBP11.19□□□□□ -0.62
ZNF548-203ENST00000594668 ARMT1Q9H993 441 aa11.19□□□□□ -0.62
ZNF548-203ENST00000594668 VEZTQ9HBM0 779 aa11.19□□□□□ -0.62
ZNF548-203ENST00000594668 FAM198AQ9UFP1 575 aa11.19□□□□□ -0.62
ZNF548-203ENST00000594668 PITPNM2Q9BZ72 1349 aa11.18□□□□□ -0.62
ZNF548-203ENST00000594668 PRKAB2O43741 272 aa11.18□□□□□ -0.62
ZNF548-203ENST00000594668 WDHD1O75717 1129 aaPredicted RBP11.18□□□□□ -0.62
ZNF548-203ENST00000594668 MCMDC2Q4G0Z9 681 aa11.18□□□□□ -0.62
ZNF548-203ENST00000594668 CCDC129Q6ZRS4 1044 aa11.18□□□□□ -0.62
ZNF548-203ENST00000594668 USP48Q86UV5 1035 aa11.18□□□□□ -0.62
ZNF548-203ENST00000594668 ZFPM1Q8IX07 1006 aa11.18□□□□□ -0.62
ZNF548-203ENST00000594668 TEX11Q8IYF3 940 aa11.18□□□□□ -0.62
ZNF548-203ENST00000594668 DCPSQ96C86 337 aaKnown RBP11.18□□□□□ -0.62
ZNF548-203ENST00000594668 STRBPQ96SI9 672 aaKnown RBP11.18□□□□□ -0.62
ZNF548-203ENST00000594668 IDI2Q9BXS1 227 aa11.18□□□□□ -0.62
ZNF548-203ENST00000594668 IL25Q9H293 177 aa11.18□□□□□ -0.62
ZNF548-203ENST00000594668 DDX4Q9NQI0 724 aaKnown RBP11.18□□□□□ -0.62
ZNF548-203ENST00000594668 HELLSQ9NRZ9 838 aa11.18□□□□□ -0.62
ZNF548-203ENST00000594668 SIPA1L1O43166 1804 aa11.18□□□□□ -0.62
ZNF548-203ENST00000594668 MYH8P13535 1937 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 CNTNAP1P78357 1384 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 ADM5C9JUS6 153 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 HIP1O00291 1037 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 GPAA1O43292 621 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 TOMM70O94826 608 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 PLCG2P16885 1265 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 FMR1Q06787 632 aaKnown RBP eCLIP11.17□□□□□ -0.62
ZNF548-203ENST00000594668 TCP10Q12799 353 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 PICALMQ13492 652 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 PRAMEF18Q5VWM3 479 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 CHADLQ6NUI6 762 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 TGFBRAP1Q8WUH2 860 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 SDR42E1Q8WUS8 393 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 AIDAQ96BJ3 306 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 GLIS2Q9BZE0 524 aaPredicted RBP11.17□□□□□ -0.62
ZNF548-203ENST00000594668 DEFB129Q9H1M3 183 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 DIAPH3Q9NSV4 1193 aa11.17□□□□□ -0.62
ZNF548-203ENST00000594668 DDX60LQ5H9U9 1706 aaKnown RBP11.17□□□□□ -0.62
ZNF548-203ENST00000594668 ITGBL1O95965 494 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-203ENST00000594668 RASA3Q14644 834 aa11.16□□□□□ -0.62
ZNF548-203ENST00000594668 FKBP1CQ5VVH2 108 aa11.16□□□□□ -0.62
ZNF548-203ENST00000594668 CDC37L1Q7L3B6 337 aa11.16□□□□□ -0.62
ZNF548-203ENST00000594668 SH3BP5LQ7L8J4 393 aa11.16□□□□□ -0.62
ZNF548-203ENST00000594668 KRT26Q7Z3Y9 468 aa11.16□□□□□ -0.62
ZNF548-203ENST00000594668 ZNF589Q86UQ0 364 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-203ENST00000594668 APOBEC3FQ8IUX4 373 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms