RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 GOLIM4O00461 696 aa23.8■■□□□ 1.4
LSM4-203ENST00000593829 NAA16Q6N069 864 aaPredicted RBP23.8■■□□□ 1.4
LSM4-203ENST00000593829 PPP2R3BQ9Y5P8 575 aa23.8■■□□□ 1.4
LSM4-203ENST00000593829 MYH2Q9UKX2 1941 aa23.79■■□□□ 1.4
LSM4-203ENST00000593829 TTC41PQ6P2S7 1318 aa23.79■■□□□ 1.4
LSM4-203ENST00000593829 CDC42EP5Q6NZY7 148 aa23.79■■□□□ 1.4
LSM4-203ENST00000593829 OTUD7AQ8TE49 926 aaPredicted RBP23.79■■□□□ 1.4
LSM4-203ENST00000593829 DDRGK1Q96HY6 314 aa23.79■■□□□ 1.4
LSM4-203ENST00000593829 TCP10L2B9ZVM9 353 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 MAP3K12Q12852 859 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 PRAMEF18Q5VWM3 479 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 USP40Q9NVE5 1235 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 PAG1Q9NWQ8 432 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 TRPM7Q96QT4 1865 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 GPR75-ASB3A0A0A6YYF3 556 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 MX1P20591 662 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 BTDP43251 543 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 TNNI2P48788 182 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 CACNB3P54284 484 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 HTRA3P83110 453 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 NUCB1Q02818 461 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 RASA3Q14644 834 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 FKBP1CQ5VVH2 108 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 TSHZ3Q63HK5 1081 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 LNPKQ9C0E8 428 aa23.78■■□□□ 1.4
LSM4-203ENST00000593829 CHD1LQ86WJ1 897 aa23.77■■□□□ 1.4
LSM4-203ENST00000593829 ERC2O15083 957 aa23.76■■□□□ 1.39
LSM4-203ENST00000593829 TMED8Q6PL24 325 aaPredicted RBP23.76■■□□□ 1.39
LSM4-203ENST00000593829 MAST2Q6P0Q8 1798 aa23.76■■□□□ 1.39
LSM4-203ENST00000593829 EDC3Q96F86 508 aaKnown RBP23.76■■□□□ 1.39
LSM4-203ENST00000593829 NOL10Q9BSC4 688 aaKnown RBP23.76■■□□□ 1.39
LSM4-203ENST00000593829 SALL3Q9BXA9 1300 aa23.75■■□□□ 1.39
LSM4-203ENST00000593829 NF2P35240 595 aa23.75■■□□□ 1.39
LSM4-203ENST00000593829 MAGEB6Q8N7X4 407 aa23.75■■□□□ 1.39
LSM4-203ENST00000593829 ABT1Q9ULW3 272 aaKnown RBP23.75■■□□□ 1.39
LSM4-203ENST00000593829 GLRX3O76003 335 aaKnown RBP23.74■■□□□ 1.39
LSM4-203ENST00000593829 FAM83AQ86UY5 434 aa23.74■■□□□ 1.39
LSM4-203ENST00000593829 C2orf69Q8N8R5 385 aa23.74■■□□□ 1.39
LSM4-203ENST00000593829 GBA2Q9HCG7 927 aaPredicted RBP23.74■■□□□ 1.39
LSM4-203ENST00000593829 MYO5AQ9Y4I1 1855 aaKnown RBP23.74■■□□□ 1.39
LSM4-203ENST00000593829 CYP7A1P22680 504 aa23.74■■□□□ 1.39
LSM4-203ENST00000593829 DOCK2Q92608 1830 aa23.73■■□□□ 1.39
LSM4-203ENST00000593829 BAG3O95817 575 aa23.73■■□□□ 1.39
LSM4-203ENST00000593829 MAP4K4O95819 1239 aaPredicted RBP23.73■■□□□ 1.39
LSM4-203ENST00000593829 SUPT20HL1Q3ZLR7 823 aa23.73■■□□□ 1.39
LSM4-203ENST00000593829 PI4K2BQ8TCG2 481 aa23.73■■□□□ 1.39
LSM4-203ENST00000593829 STAP2Q9UGK3 403 aa23.73■■□□□ 1.39
LSM4-203ENST00000593829 CNTNAP1P78357 1384 aa23.73■■□□□ 1.39
LSM4-203ENST00000593829 SLC9C2Q5TAH2 1124 aa23.72■■□□□ 1.39
LSM4-203ENST00000593829 ADGRA1Q86SQ6 560 aa23.72■■□□□ 1.39
LSM4-203ENST00000593829 TMEM39BQ9GZU3 492 aa23.72■■□□□ 1.39
LSM4-203ENST00000593829 TLL2Q9Y6L7 1015 aa23.72■■□□□ 1.39
LSM4-203ENST00000593829 PDE1AP54750 535 aa23.72■■□□□ 1.39
LSM4-203ENST00000593829 RHBDL3P58872 404 aa23.72■■□□□ 1.39
LSM4-203ENST00000593829 PPP4CP60510 307 aa23.72■■□□□ 1.39
LSM4-203ENST00000593829 NFIAQ12857 509 aa23.72■■□□□ 1.39
LSM4-203ENST00000593829 IDI2Q9BXS1 227 aa23.72■■□□□ 1.39
LSM4-203ENST00000593829 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.72■■□□□ 1.393e-8■■□□□ 14.5
LSM4-203ENST00000593829 AATFQ9NY61 560 aaKnown RBP eCLIP23.72■■□□□ 1.39
LSM4-203ENST00000593829 PDE6AP16499 860 aa23.71■■□□□ 1.39
LSM4-203ENST00000593829 PLCG2P16885 1265 aa23.71■■□□□ 1.39
LSM4-203ENST00000593829 FKBP1BP68106 108 aa23.71■■□□□ 1.39
LSM4-203ENST00000593829 SAPCD2Q86UD0 394 aa23.71■■□□□ 1.39
LSM4-203ENST00000593829 NBPF12Q5TAG4 269 aaPredicted RBP23.71■■□□□ 1.39
LSM4-203ENST00000593829 FAM151AQ8WW52 585 aa23.71■■□□□ 1.39
LSM4-203ENST00000593829 TEPSINQ96N21 525 aa23.71■■□□□ 1.39
LSM4-203ENST00000593829 FAM198AQ9UFP1 575 aa23.71■■□□□ 1.39
LSM4-203ENST00000593829 WDHD1O75717 1129 aaPredicted RBP23.7■■□□□ 1.38
LSM4-203ENST00000593829 TCP10Q12799 353 aa23.7■■□□□ 1.38
LSM4-203ENST00000593829 RGS3P49796 1198 aa23.69■■□□□ 1.38
LSM4-203ENST00000593829 CERS3Q8IU89 383 aa23.69■■□□□ 1.38
LSM4-203ENST00000593829 RASSF10A6NK89 507 aa23.69■■□□□ 1.38
LSM4-203ENST00000593829 ENTPD3O75355 529 aa23.69■■□□□ 1.38
LSM4-203ENST00000593829 TTLL12Q14166 644 aaPredicted RBP23.69■■□□□ 1.38
LSM4-203ENST00000593829 DEFB115Q30KQ5 88 aa23.69■■□□□ 1.38
LSM4-203ENST00000593829 ZNF532Q9HCE3 1301 aa23.68■■□□□ 1.38
LSM4-203ENST00000593829 RFX7Q2KHR2 1363 aa23.68■■□□□ 1.38
LSM4-203ENST00000593829 HUNKP57058 714 aa23.68■■□□□ 1.38
LSM4-203ENST00000593829 ZSCAN25Q6NSZ9 544 aa23.68■■□□□ 1.38
LSM4-203ENST00000593829 TEX11Q8IYF3 940 aa23.68■■□□□ 1.38
LSM4-203ENST00000593829 DNAJC5GQ8N7S2 189 aa23.68■■□□□ 1.38
LSM4-203ENST00000593829 KBTBD3Q8NAB2 608 aa23.68■■□□□ 1.38
LSM4-203ENST00000593829 MIGA1Q8NAN2 632 aa23.68■■□□□ 1.38
LSM4-203ENST00000593829 SH3RF3Q8TEJ3 882 aaPredicted RBP23.68■■□□□ 1.38
LSM4-203ENST00000593829 RPAP1Q9BWH6 1393 aaPredicted RBP23.68■■□□□ 1.38
LSM4-203ENST00000593829 PPP1R12BO60237 982 aaPredicted RBP23.67■■□□□ 1.38
LSM4-203ENST00000593829 ADD2P35612 726 aa23.67■■□□□ 1.38
LSM4-203ENST00000593829 PICALMQ13492 652 aa23.67■■□□□ 1.38
LSM4-203ENST00000593829 CENPQQ7L2Z9 268 aaPredicted RBP23.67■■□□□ 1.38
LSM4-203ENST00000593829 CDAN1Q8IWY9 1227 aa23.67■■□□□ 1.38
LSM4-203ENST00000593829 HHIPL1Q96JK4 782 aa23.67■■□□□ 1.38
LSM4-203ENST00000593829 MKRN1Q9UHC7 482 aaKnown RBP23.67■■□□□ 1.38
LSM4-203ENST00000593829 PAPPA2Q9BXP8 1791 aa23.67■■□□□ 1.38
LSM4-203ENST00000593829 TCRBV5S4A2TA0A5A2 114 aa23.67■■□□□ 1.38
LSM4-203ENST00000593829 NPM3O75607 178 aaKnown RBP23.67■■□□□ 1.38
LSM4-203ENST00000593829 PRKG1Q13976 671 aa23.67■■□□□ 1.38
LSM4-203ENST00000593829 PLEKHM2Q8IWE5 1019 aa23.67■■□□□ 1.38
LSM4-203ENST00000593829 DDX4Q9NQI0 724 aaKnown RBP23.67■■□□□ 1.38
LSM4-203ENST00000593829 SSC5DA1L4H1 1573 aa23.66■■□□□ 1.38
LSM4-203ENST00000593829 CEP350Q5VT06 3117 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms