RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 BLOC1S2Q6QNY1 142 aa13.54□□□□□ -0.24
TUBD1-211ENST00000591548 FBXW7Q969H0 707 aa13.54□□□□□ -0.24
TUBD1-211ENST00000591548 PDRG1Q9NUG6 133 aa13.54□□□□□ -0.24
TUBD1-211ENST00000591548 MROH7-TTC4A0A0A0MT08 1334 aa13.54□□□□□ -0.24
TUBD1-211ENST00000591548 LDHCP07864 332 aa13.54□□□□□ -0.24
TUBD1-211ENST00000591548 SOGA3Q5TF21 947 aa13.54□□□□□ -0.24
TUBD1-211ENST00000591548 NOL8Q76FK4 1167 aaKnown RBP13.54□□□□□ -0.24
TUBD1-211ENST00000591548 NLGN2Q8NFZ4 835 aa13.54□□□□□ -0.24
TUBD1-211ENST00000591548 NACAP1Q9BZK3 213 aa13.54□□□□□ -0.24
TUBD1-211ENST00000591548 NAPBQ9H115 298 aa13.54□□□□□ -0.24
TUBD1-211ENST00000591548 SPON1Q9HCB6 807 aa13.54□□□□□ -0.24
TUBD1-211ENST00000591548 SUGT1Q9Y2Z0 365 aa13.54□□□□□ -0.24
TUBD1-211ENST00000591548 SCN9AQ15858 1988 aa13.53□□□□□ -0.24
TUBD1-211ENST00000591548 ZNF646O15015 1829 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-211ENST00000591548 YDJCA8MPS7 323 aa13.53□□□□□ -0.24
TUBD1-211ENST00000591548 PPP4CP60510 307 aa13.53□□□□□ -0.24
TUBD1-211ENST00000591548 DACT2Q5SW24 774 aa13.53□□□□□ -0.24
TUBD1-211ENST00000591548 STRIP1Q5VSL9 837 aa13.53□□□□□ -0.24
TUBD1-211ENST00000591548 TBC1D10CQ8IV04 446 aa13.53□□□□□ -0.24
TUBD1-211ENST00000591548 FAM163AQ96GL9 167 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-211ENST00000591548 TMX3Q96JJ7 454 aa13.53□□□□□ -0.24
TUBD1-211ENST00000591548 TCEANC2Q96MN5 208 aa13.53□□□□□ -0.24
TUBD1-211ENST00000591548 ALDH8A1Q9H2A2 487 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-211ENST00000591548 ZNF277Q9NRM2 450 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-211ENST00000591548 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
TUBD1-211ENST00000591548 COL4A5P29400 1685 aa13.53□□□□□ -0.24
TUBD1-211ENST00000591548 GPR75-ASB3A0A0A6YYF3 556 aa13.52□□□□□ -0.25
TUBD1-211ENST00000591548 TDO2P48775 406 aa13.52□□□□□ -0.25
TUBD1-211ENST00000591548 LARP6Q9BRS8 491 aaKnown RBP13.52□□□□□ -0.25
TUBD1-211ENST00000591548 CRNKL1Q9BZJ0 848 aaKnown RBP13.52□□□□□ -0.25
TUBD1-211ENST00000591548 MYH2Q9UKX2 1941 aa13.52□□□□□ -0.25
TUBD1-211ENST00000591548 LAMA4Q16363 1823 aa13.52□□□□□ -0.25
TUBD1-211ENST00000591548 GAKO14976 1311 aa13.52□□□□□ -0.25
TUBD1-211ENST00000591548 USP17L3A6NCW0 530 aa13.51□□□□□ -0.25
TUBD1-211ENST00000591548 USP17L4A6NCW7 530 aa13.51□□□□□ -0.25
TUBD1-211ENST00000591548 F8W031 263 aaPredicted RBP13.51□□□□□ -0.25
TUBD1-211ENST00000591548 HMGB1P09429 215 aaKnown RBP13.51□□□□□ -0.25
TUBD1-211ENST00000591548 FKBP1AP62942 108 aaKnown RBP13.51□□□□□ -0.25
TUBD1-211ENST00000591548 EXOSC10Q01780 885 aaKnown RBP13.51□□□□□ -0.25
TUBD1-211ENST00000591548 TOB2Q14106 344 aaPredicted RBP13.51□□□□□ -0.25
TUBD1-211ENST00000591548 GIMAP6Q6P9H5 292 aa13.51□□□□□ -0.25
TUBD1-211ENST00000591548 DHX32Q7L7V1 743 aaKnown RBP13.51□□□□□ -0.25
TUBD1-211ENST00000591548 USP17L1Q7RTZ2 530 aa13.51□□□□□ -0.25
TUBD1-211ENST00000591548 SH3RF3Q8TEJ3 882 aaPredicted RBP13.51□□□□□ -0.25
TUBD1-211ENST00000591548 VPS33BQ9H267 617 aa13.51□□□□□ -0.25
TUBD1-211ENST00000591548 SLKQ9H2G2 1235 aaPredicted RBP13.51□□□□□ -0.25
TUBD1-211ENST00000591548 TTF2Q9UNY4 1162 aaKnown RBP13.51□□□□□ -0.25
TUBD1-211ENST00000591548 BCS1LQ9Y276 419 aa13.51□□□□□ -0.25
TUBD1-211ENST00000591548 TACC3Q9Y6A5 838 aa13.51□□□□□ -0.25
TUBD1-211ENST00000591548 BAG3O95817 575 aa13.5□□□□□ -0.25
TUBD1-211ENST00000591548 BTDP43251 543 aa13.5□□□□□ -0.25
TUBD1-211ENST00000591548 CTDSPL2Q05D32 466 aa13.5□□□□□ -0.25
TUBD1-211ENST00000591548 SLF2Q8IX21 1173 aa13.5□□□□□ -0.25
TUBD1-211ENST00000591548 LARGE2Q8N3Y3 721 aa13.5□□□□□ -0.25
TUBD1-211ENST00000591548 NKX2-3Q8TAU0 364 aa13.5□□□□□ -0.25
TUBD1-211ENST00000591548 DCP1AQ9NPI6 582 aaPredicted RBP13.5□□□□□ -0.25
TUBD1-211ENST00000591548 INCENPQ9NQS7 918 aa13.5□□□□□ -0.25
TUBD1-211ENST00000591548 ATP8A2Q9NTI2 1148 aa13.5□□□□□ -0.25
TUBD1-211ENST00000591548 LIMCH1Q9UPQ0 1083 aa13.5□□□□□ -0.25
TUBD1-211ENST00000591548 DAGLAQ9Y4D2 1042 aa13.5□□□□□ -0.25
TUBD1-211ENST00000591548 FER1L6Q2WGJ9 1857 aa13.5□□□□□ -0.25
TUBD1-211ENST00000591548 SMIM22K7EJ46 135 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 NFKBIEO00221 500 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 DDIT3P35638 169 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 CUL4AQ13619 759 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 CTR9Q6PD62 1173 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 MB21D2Q8IYB1 491 aaPredicted RBP13.49□□□□□ -0.25
TUBD1-211ENST00000591548 NCOA7Q8NI08 942 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 NOL10Q9BSC4 688 aaKnown RBP13.49□□□□□ -0.25
TUBD1-211ENST00000591548 MKRN1Q9UHC7 482 aaKnown RBP13.49□□□□□ -0.25
TUBD1-211ENST00000591548 ANAPC4Q9UJX5 808 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 CYP2D7A0A087X1C5 515 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 USP17L12C9JPN9 530 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 USP17L21D6R901 530 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 LARGE1O95461 756 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 HSP90AA1P07900 732 aaKnown RBP13.49□□□□□ -0.25
TUBD1-211ENST00000591548 IARSP41252 1262 aaKnown RBP13.49□□□□□ -0.25
TUBD1-211ENST00000591548 SCNN1DP51172 638 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 RHBDL3P58872 404 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 PPARAQ07869 468 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 Q6ZUG5 572 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 CHST3Q7LGC8 479 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 CERS3Q8IU89 383 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 TIAM2Q8IVF5 1701 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 LRRC2Q9BYS8 371 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 TAOK3Q9H2K8 898 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 TPCN1Q9ULQ1 816 aa13.49□□□□□ -0.25
TUBD1-211ENST00000591548 NEDD4P46934 1319 aa13.48□□□□□ -0.25
TUBD1-211ENST00000591548 BAZ2AQ9UIF9 1905 aaKnown RBP13.48□□□□□ -0.25
TUBD1-211ENST00000591548 MINDY4BA8MYZ0 360 aa13.48□□□□□ -0.25
TUBD1-211ENST00000591548 ANTXR2P58335 489 aa13.48□□□□□ -0.25
TUBD1-211ENST00000591548 EVX2Q03828 476 aa13.48□□□□□ -0.25
TUBD1-211ENST00000591548 ANKRD1Q15327 319 aa13.48□□□□□ -0.25
TUBD1-211ENST00000591548 AKNAD1Q5T1N1 836 aa13.48□□□□□ -0.25
TUBD1-211ENST00000591548 HHIPL2Q6UWX4 724 aa13.48□□□□□ -0.25
TUBD1-211ENST00000591548 KIAA0825Q8IV33 1275 aa13.48□□□□□ -0.25
TUBD1-211ENST00000591548 STAG1Q8WVM7 1258 aa13.48□□□□□ -0.25
TUBD1-211ENST00000591548 AGXT2Q9BYV1 514 aa13.48□□□□□ -0.25
TUBD1-211ENST00000591548 ADAMTSL1Q8N6G6 1762 aa13.47□□□□□ -0.25
TUBD1-211ENST00000591548 PLCG2P16885 1265 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms