RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 PPM1FP49593 454 aaPredicted RBP15.06■□□□□ 0
SMARCA4-216ENST00000591545 KIAA0753Q2KHM9 967 aa15.06■□□□□ 0
SMARCA4-216ENST00000591545 PPM1EQ8WY54 764 aa15.06■□□□□ 0
SMARCA4-216ENST00000591545 TCEANC2Q96MN5 208 aa15.06■□□□□ 0
SMARCA4-216ENST00000591545 FERMT1Q9BQL6 677 aa15.06■□□□□ 0
SMARCA4-216ENST00000591545 ZCCHC11Q5TAX3 1644 aaKnown RBP15.06■□□□□ 0
SMARCA4-216ENST00000591545 BLMP54132 1417 aaPredicted RBP15.06■□□□□ 0
SMARCA4-216ENST00000591545 PHACTR2O75167 634 aa15.06■□□□□ 0
SMARCA4-216ENST00000591545 KRT13P13646 458 aa15.06■□□□□ 0
SMARCA4-216ENST00000591545 SELENOOQ9BVL4 669 aa15.06■□□□□ 0
SMARCA4-216ENST00000591545 STMN4Q9H169 189 aaPredicted RBP15.06■□□□□ 0
SMARCA4-216ENST00000591545 PUF60Q9UHX1 559 aaKnown RBP15.06■□□□□ 0
SMARCA4-216ENST00000591545 ERCC6L2Q5T890 1561 aa15.05■□□□□ 0
SMARCA4-216ENST00000591545 TRIM75PA6NK02 468 aa15.05■□□□□ 0
SMARCA4-216ENST00000591545 TAF5LO75529 589 aa15.05■□□□□ 0
SMARCA4-216ENST00000591545 CNPY2Q9Y2B0 182 aa15.05■□□□□ 0
SMARCA4-216ENST00000591545 TSPOAP1O95153 1857 aa15.05■□□□□ 0
SMARCA4-216ENST00000591545 GPHNQ9NQX3 736 aaPredicted RBP15.05■□□□□ 0
SMARCA4-216ENST00000591545 PLXNC1O60486 1568 aa15.05■□□□□ -0
SMARCA4-216ENST00000591545 RNF123Q5XPI4 1314 aa15.05■□□□□ -0
SMARCA4-216ENST00000591545 MACROD2A1Z1Q3 448 aa15.05■□□□□ -0
SMARCA4-216ENST00000591545 TACC1O75410 805 aa15.05■□□□□ -0
SMARCA4-216ENST00000591545 ATP2B4P23634 1241 aa15.05■□□□□ -0
SMARCA4-216ENST00000591545 HSPA4P34932 840 aa15.05■□□□□ -0
SMARCA4-216ENST00000591545 KRT83P78385 493 aa15.05■□□□□ -0
SMARCA4-216ENST00000591545 RRAGBQ5VZM2 374 aa15.05■□□□□ -0
SMARCA4-216ENST00000591545 CSADQ9Y600 493 aa15.05■□□□□ -0
SMARCA4-216ENST00000591545 METP08581 1390 aa15.05■□□□□ -0
SMARCA4-216ENST00000591545 UNC5CLQ8IV45 518 aa15.05■□□□□ -0
SMARCA4-216ENST00000591545 RASAL2Q9UJF2 1139 aa15.05■□□□□ -0
SMARCA4-216ENST00000591545 PSMA7O14818 248 aa15.04■□□□□ -0
SMARCA4-216ENST00000591545 PRKG1Q13976 671 aa15.04■□□□□ -0
SMARCA4-216ENST00000591545 UBE4AQ14139 1066 aa15.04■□□□□ -0
SMARCA4-216ENST00000591545 ATL3Q6DD88 541 aa15.04■□□□□ -0
SMARCA4-216ENST00000591545 NECAB1Q8N987 351 aa15.04■□□□□ -0
SMARCA4-216ENST00000591545 ZNF594Q96JF6 807 aaPredicted RBP15.04■□□□□ -0
SMARCA4-216ENST00000591545 TMX1Q9H3N1 280 aa15.04■□□□□ -0
SMARCA4-216ENST00000591545 DNAI1Q9UI46 699 aa15.04■□□□□ -0
SMARCA4-216ENST00000591545 TNNQ9UQP3 1299 aa15.04■□□□□ -0
SMARCA4-216ENST00000591545 PTPRTO14522 1441 aa15.04■□□□□ -0
SMARCA4-216ENST00000591545 APBB1IPQ7Z5R6 666 aaPredicted RBP15.04■□□□□ -0
SMARCA4-216ENST00000591545 TBC1D5Q92609 795 aa15.04■□□□□ -0
SMARCA4-216ENST00000591545 GOLGA1Q92805 767 aa15.04■□□□□ -0
SMARCA4-216ENST00000591545 PRPF4BQ13523 1007 aaKnown RBP15.04■□□□□ -0
SMARCA4-216ENST00000591545 DHX32Q7L7V1 743 aaKnown RBP15.04■□□□□ -0
SMARCA4-216ENST00000591545 C8orf34Q49A92 452 aa15.04■□□□□ -0
SMARCA4-216ENST00000591545 IMPG2Q9BZV3 1241 aa15.04■□□□□ -0
SMARCA4-216ENST00000591545 DACT1Q9NYF0 836 aa15.04■□□□□ -0
SMARCA4-216ENST00000591545 DHX37Q8IY37 1157 aaKnown RBP15.03■□□□□ -0
SMARCA4-216ENST00000591545 APPBP2Q92624 585 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 GLT8D2Q9H1C3 349 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 DBNDD2Q9BQY9 259 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 PLA2R1Q13018 1463 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 USP19O94966 1318 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 ZBED4O75132 1171 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 KIF4AO95239 1232 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 ACTN2P35609 894 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 KRT2P35908 639 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 ARHGEF25Q86VW2 580 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 SPAG5Q96R06 1193 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 CTAGE9A4FU28 777 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 IRX3P78415 501 aaPredicted RBP15.03■□□□□ -0
SMARCA4-216ENST00000591545 LMBR1Q8WVP7 490 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 TEKT1Q969V4 418 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 TTC12Q9H892 705 aaPredicted RBP15.03■□□□□ -0
SMARCA4-216ENST00000591545 WDR17Q8IZU2 1322 aa15.03■□□□□ -0
SMARCA4-216ENST00000591545 GTF2IP78347 998 aa15.02■□□□□ -0
SMARCA4-216ENST00000591545 TYRO3Q06418 890 aa15.02■□□□□ -0
SMARCA4-216ENST00000591545 CCDC77Q9BR77 488 aa15.02■□□□□ -0
SMARCA4-216ENST00000591545 HOMER2Q9NSB8 354 aa15.02■□□□□ -0
SMARCA4-216ENST00000591545 ZBTB40Q9NUA8 1239 aa15.02■□□□□ -0
SMARCA4-216ENST00000591545 AOPEPQ8N6M6 819 aa15.02□□□□□ -0.01
SMARCA4-216ENST00000591545 CEP63Q96MT8 703 aa15.02□□□□□ -0.01
SMARCA4-216ENST00000591545 ARMT1Q9H993 441 aa15.02□□□□□ -0.01
SMARCA4-216ENST00000591545 KRT86O43790 486 aa15.02□□□□□ -0.01
SMARCA4-216ENST00000591545 SYT1P21579 422 aa15.02□□□□□ -0.01
SMARCA4-216ENST00000591545 CTSWP56202 376 aa15.02□□□□□ -0.01
SMARCA4-216ENST00000591545 USPL1Q5W0Q7 1092 aa15.02□□□□□ -0.01
SMARCA4-216ENST00000591545 DCAF15Q66K64 600 aa15.02□□□□□ -0.01
SMARCA4-216ENST00000591545 SUCLG2Q96I99 432 aa15.02□□□□□ -0.01
SMARCA4-216ENST00000591545 GPCPD1Q9NPB8 672 aa15.02□□□□□ -0.01
SMARCA4-216ENST00000591545 RTL1A6NKG5 1358 aa15.02□□□□□ -0.01
SMARCA4-216ENST00000591545 CROCC2H7BZ55 1655 aa15.02□□□□□ -0.01
SMARCA4-216ENST00000591545 FAM13AO94988 1023 aa15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 CREB3L3Q68CJ9 461 aa15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 SEPT12Q8IYM1 358 aa15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 CCDC97Q96F63 343 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 AATFQ9NY61 560 aaKnown RBP eCLIP15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 IKBKGQ9Y6K9 419 aa15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 GIGYF1O75420 1035 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 SMCR8Q8TEV9 937 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 SP4Q02446 784 aa15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 BRAPQ7Z569 592 aa15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 SPATA24Q86W54 205 aa15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 TICAM2Q86XR7 235 aa15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 AS3MTQ9HBK9 375 aa15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 TTF2Q9UNY4 1162 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 SPTLC2O15270 562 aa15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 ASIC1P78348 528 aa15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 MFSD14BQ5SR56 506 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms