RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 IGSF3O75054 1194 aa22.13■■□□□ 1.13
CROCCP3-205ENST00000591316 BAG3O95817 575 aa22.13■■□□□ 1.13
CROCCP3-205ENST00000591316 ZFYP08048 801 aaPredicted RBP22.13■■□□□ 1.13
CROCCP3-205ENST00000591316 POTEIP0CG38 1075 aa22.13■■□□□ 1.13
CROCCP3-205ENST00000591316 POTEJP0CG39 1038 aa22.13■■□□□ 1.13
CROCCP3-205ENST00000591316 ZBED3Q96IU2 234 aaPredicted RBP22.13■■□□□ 1.13
CROCCP3-205ENST00000591316 SEC62Q99442 399 aaKnown RBP22.13■■□□□ 1.13
CROCCP3-205ENST00000591316 PUS7LQ9H0K6 701 aaKnown RBP22.13■■□□□ 1.13
CROCCP3-205ENST00000591316 CDC42EP5Q6NZY7 148 aa22.12■■□□□ 1.13
CROCCP3-205ENST00000591316 VEZTQ9HBM0 779 aa22.12■■□□□ 1.13
CROCCP3-205ENST00000591316 MAGEB6P1A0A0J9YX57 407 aa22.12■■□□□ 1.13
CROCCP3-205ENST00000591316 CACNB3P54284 484 aa22.12■■□□□ 1.13
CROCCP3-205ENST00000591316 ANGEL2Q5VTE6 544 aaKnown RBP22.12■■□□□ 1.13
CROCCP3-205ENST00000591316 APPBP2Q92624 585 aa22.12■■□□□ 1.13
CROCCP3-205ENST00000591316 OSBP2Q969R2 916 aa22.12■■□□□ 1.13
CROCCP3-205ENST00000591316 FAM227BQ96M60 508 aa22.12■■□□□ 1.13
CROCCP3-205ENST00000591316 CWC27Q6UX04 472 aaKnown RBP22.11■■□□□ 1.13
CROCCP3-205ENST00000591316 SH3RF3Q8TEJ3 882 aaPredicted RBP22.11■■□□□ 1.13
CROCCP3-205ENST00000591316 DIAPH3Q9NSV4 1193 aa22.11■■□□□ 1.13
CROCCP3-205ENST00000591316 ZNF70Q9UC06 446 aaPredicted RBP22.11■■□□□ 1.13
CROCCP3-205ENST00000591316 MYH2Q9UKX2 1941 aa22.1■■□□□ 1.13
CROCCP3-205ENST00000591316 NMIQ13287 307 aaPredicted RBP22.1■■□□□ 1.13
CROCCP3-205ENST00000591316 AIDAQ96BJ3 306 aa22.1■■□□□ 1.13
CROCCP3-205ENST00000591316 ARMT1Q9H993 441 aa22.1■■□□□ 1.13
CROCCP3-205ENST00000591316 TCP10L2B9ZVM9 353 aa22.09■■□□□ 1.13
CROCCP3-205ENST00000591316 MBD4O95243 580 aa22.09■■□□□ 1.13
CROCCP3-205ENST00000591316 PPP4CP60510 307 aa22.09■■□□□ 1.13
CROCCP3-205ENST00000591316 ZMYM1Q5SVZ6 1142 aa22.09■■□□□ 1.13
CROCCP3-205ENST00000591316 TMED8Q6PL24 325 aaPredicted RBP22.09■■□□□ 1.13
CROCCP3-205ENST00000591316 DCPSQ96C86 337 aaKnown RBP22.09■■□□□ 1.13
CROCCP3-205ENST00000591316 GGA3Q9NZ52 723 aa22.09■■□□□ 1.13
CROCCP3-205ENST00000591316 ADAMTSL1Q8N6G6 1762 aa22.09■■□□□ 1.13
CROCCP3-205ENST00000591316 SCN4AP35499 1836 aa22.09■■□□□ 1.13
CROCCP3-205ENST00000591316 M0R2C6 588 aa22.08■■□□□ 1.13
CROCCP3-205ENST00000591316 RHBDL3P58872 404 aa22.08■■□□□ 1.13
CROCCP3-205ENST00000591316 SPDYE2Q495Y8 402 aa22.08■■□□□ 1.13
CROCCP3-205ENST00000591316 LCORLQ8N3X6 602 aa22.08■■□□□ 1.13
CROCCP3-205ENST00000591316 RIOK1Q9BRS2 568 aaKnown RBP22.08■■□□□ 1.13
CROCCP3-205ENST00000591316 TMOD2Q9NZR1 351 aa22.08■■□□□ 1.13
CROCCP3-205ENST00000591316 DOCK2Q92608 1830 aa22.08■■□□□ 1.13
CROCCP3-205ENST00000591316 A0A0D9SFI3 127 aa22.08■■□□□ 1.12
CROCCP3-205ENST00000591316 HIP1O00291 1037 aa22.08■■□□□ 1.12
CROCCP3-205ENST00000591316 KIF3CO14782 793 aa22.08■■□□□ 1.12
CROCCP3-205ENST00000591316 CHMLP26374 656 aa22.08■■□□□ 1.12
CROCCP3-205ENST00000591316 CCDC129Q6ZRS4 1044 aa22.08■■□□□ 1.12
CROCCP3-205ENST00000591316 TEX11Q8IYF3 940 aa22.08■■□□□ 1.12
CROCCP3-205ENST00000591316 PLCG2P16885 1265 aa22.07■■□□□ 1.12
CROCCP3-205ENST00000591316 TCP10Q12799 353 aa22.07■■□□□ 1.12
CROCCP3-205ENST00000591316 PICALMQ13492 652 aa22.07■■□□□ 1.12
CROCCP3-205ENST00000591316 MCMDC2Q4G0Z9 681 aa22.07■■□□□ 1.12
CROCCP3-205ENST00000591316 MAP1SQ66K74 1059 aaPredicted RBP22.07■■□□□ 1.12
CROCCP3-205ENST00000591316 ZC3H15Q8WU90 426 aaKnown RBP22.07■■□□□ 1.12
CROCCP3-205ENST00000591316 TGFBRAP1Q8WUH2 860 aa22.07■■□□□ 1.12
CROCCP3-205ENST00000591316 HELLSQ9NRZ9 838 aa22.07■■□□□ 1.12
CROCCP3-205ENST00000591316 NFIAQ12857 509 aa22.06■■□□□ 1.12
CROCCP3-205ENST00000591316 LDHDQ86WU2 507 aa22.06■■□□□ 1.12
CROCCP3-205ENST00000591316 GPAA1O43292 621 aa22.05■■□□□ 1.12
CROCCP3-205ENST00000591316 PRKAB2O43741 272 aa22.05■■□□□ 1.12
CROCCP3-205ENST00000591316 TICAM2Q86XR7 235 aa22.05■■□□□ 1.12
CROCCP3-205ENST00000591316 PGAP2Q9UHJ9 254 aa22.05■■□□□ 1.12
CROCCP3-205ENST00000591316 WDHD1O75717 1129 aaPredicted RBP22.04■■□□□ 1.12
CROCCP3-205ENST00000591316 USP5P45974 858 aa22.04■■□□□ 1.12
CROCCP3-205ENST00000591316 DLK2Q6UY11 383 aa22.04■■□□□ 1.12
CROCCP3-205ENST00000591316 USP48Q86UV5 1035 aa22.04■■□□□ 1.12
CROCCP3-205ENST00000591316 SULF1Q8IWU6 871 aa22.04■■□□□ 1.12
CROCCP3-205ENST00000591316 SDR42E1Q8WUS8 393 aa22.04■■□□□ 1.12
CROCCP3-205ENST00000591316 STRBPQ96SI9 672 aaKnown RBP22.04■■□□□ 1.12
CROCCP3-205ENST00000591316 SLC4A4Q9Y6R1 1079 aa22.04■■□□□ 1.12
CROCCP3-205ENST00000591316 PRAMEF18Q5VWM3 479 aa22.04■■□□□ 1.12
CROCCP3-205ENST00000591316 KRT26Q7Z3Y9 468 aa22.04■■□□□ 1.12
CROCCP3-205ENST00000591316 MAPKAPK5Q8IW41 473 aa22.04■■□□□ 1.12
CROCCP3-205ENST00000591316 CRNKL1Q9BZJ0 848 aaKnown RBP22.04■■□□□ 1.12
CROCCP3-205ENST00000591316 RFX7Q2KHR2 1363 aa22.03■■□□□ 1.12
CROCCP3-205ENST00000591316 CDC45O75419 566 aa22.03■■□□□ 1.12
CROCCP3-205ENST00000591316 APPP05067 770 aa22.03■■□□□ 1.12
CROCCP3-205ENST00000591316 RASA3Q14644 834 aa22.03■■□□□ 1.12
CROCCP3-205ENST00000591316 ZNF589Q86UQ0 364 aaPredicted RBP22.03■■□□□ 1.12
CROCCP3-205ENST00000591316 CERS3Q8IU89 383 aa22.03■■□□□ 1.12
CROCCP3-205ENST00000591316 APOBEC3FQ8IUX4 373 aaKnown RBP22.03■■□□□ 1.12
CROCCP3-205ENST00000591316 ZFPM1Q8IX07 1006 aa22.03■■□□□ 1.12
CROCCP3-205ENST00000591316 GLIS2Q9BZE0 524 aaPredicted RBP22.03■■□□□ 1.12
CROCCP3-205ENST00000591316 DEFB129Q9H1M3 183 aa22.03■■□□□ 1.12
CROCCP3-205ENST00000591316 DDX4Q9NQI0 724 aaKnown RBP22.03■■□□□ 1.12
CROCCP3-205ENST00000591316 FAM198AQ9UFP1 575 aa22.03■■□□□ 1.12
CROCCP3-205ENST00000591316 MAST2Q6P0Q8 1798 aa22.02■■□□□ 1.12
CROCCP3-205ENST00000591316 ADM5C9JUS6 153 aa22.02■■□□□ 1.12
CROCCP3-205ENST00000591316 RUFY2Q8WXA3 655 aa22.02■■□□□ 1.12
CROCCP3-205ENST00000591316 IDI2Q9BXS1 227 aa22.02■■□□□ 1.12
CROCCP3-205ENST00000591316 TNNI2P48788 182 aa22.01■■□□□ 1.11
CROCCP3-205ENST00000591316 CHADLQ6NUI6 762 aa22.01■■□□□ 1.11
CROCCP3-205ENST00000591316 CASC1Q6TDU7 716 aa22.01■■□□□ 1.11
CROCCP3-205ENST00000591316 CDC37L1Q7L3B6 337 aa22.01■■□□□ 1.11
CROCCP3-205ENST00000591316 TMEM39BQ9GZU3 492 aa22.01■■□□□ 1.11
CROCCP3-205ENST00000591316 IL25Q9H293 177 aa22.01■■□□□ 1.11
CROCCP3-205ENST00000591316 MYH7P12883 1935 aa22.01■■□□□ 1.11
CROCCP3-205ENST00000591316 AK9Q5TCS8 1911 aa22.01■■□□□ 1.11
CROCCP3-205ENST00000591316 TNFAIP1Q13829 316 aa22■■□□□ 1.11
CROCCP3-205ENST00000591316 SLC4A8Q2Y0W8 1093 aa22■■□□□ 1.11
CROCCP3-205ENST00000591316 ZSCAN29Q8IWY8 852 aaPredicted RBP22■■□□□ 1.11
CROCCP3-205ENST00000591316 SAP30BPQ9UHR5 308 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms