RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 BTDP43251 543 aa25.6■■□□□ 1.69
CIRBP-229ENST00000590704 PPP4CP60510 307 aa25.6■■□□□ 1.69
CIRBP-229ENST00000590704 NFIAQ12857 509 aa25.6■■□□□ 1.69
CIRBP-229ENST00000590704 TTF1Q15361 905 aaPredicted RBP25.6■■□□□ 1.69
CIRBP-229ENST00000590704 NAA16Q6N069 864 aaPredicted RBP25.6■■□□□ 1.69
CIRBP-229ENST00000590704 SKAP1Q86WV1 359 aa25.6■■□□□ 1.69
CIRBP-229ENST00000590704 TEPSINQ96N21 525 aa25.6■■□□□ 1.69
CIRBP-229ENST00000590704 FAM198AQ9UFP1 575 aa25.6■■□□□ 1.69
CIRBP-229ENST00000590704 MAST2Q6P0Q8 1798 aa25.6■■□□□ 1.69
CIRBP-229ENST00000590704 MAGEB6Q8N7X4 407 aa25.6■■□□□ 1.69
CIRBP-229ENST00000590704 DEFB129Q9H1M3 183 aa25.6■■□□□ 1.69
CIRBP-229ENST00000590704 WDHD1O75717 1129 aaPredicted RBP25.59■■□□□ 1.69
CIRBP-229ENST00000590704 NEFLP07196 543 aa25.59■■□□□ 1.69
CIRBP-229ENST00000590704 PDE6AP16499 860 aa25.59■■□□□ 1.69
CIRBP-229ENST00000590704 CYP7A1P22680 504 aa25.59■■□□□ 1.69
CIRBP-229ENST00000590704 ERICH6BQ5W0A0 696 aa25.59■■□□□ 1.69
CIRBP-229ENST00000590704 SULF1Q8IWU6 871 aa25.59■■□□□ 1.69
CIRBP-229ENST00000590704 ZFPM1Q8IX07 1006 aa25.59■■□□□ 1.69
CIRBP-229ENST00000590704 GPATCH3Q96I76 525 aa25.59■■□□□ 1.69
CIRBP-229ENST00000590704 USP40Q9NVE5 1235 aa25.59■■□□□ 1.69
CIRBP-229ENST00000590704 LDHCP07864 332 aa25.58■■□□□ 1.69
CIRBP-229ENST00000590704 ADD2P35612 726 aa25.58■■□□□ 1.69
CIRBP-229ENST00000590704 MAP3K12Q12852 859 aa25.58■■□□□ 1.69
CIRBP-229ENST00000590704 RASA3Q14644 834 aa25.58■■□□□ 1.69
CIRBP-229ENST00000590704 FKBP1CQ5VVH2 108 aa25.58■■□□□ 1.69
CIRBP-229ENST00000590704 CENPQQ7L2Z9 268 aaPredicted RBP25.58■■□□□ 1.69
CIRBP-229ENST00000590704 APOBEC3FQ8IUX4 373 aaKnown RBP25.58■■□□□ 1.69
CIRBP-229ENST00000590704 KBTBD3Q8NAB2 608 aa25.58■■□□□ 1.69
CIRBP-229ENST00000590704 CDCA5Q96FF9 252 aa25.58■■□□□ 1.69
CIRBP-229ENST00000590704 DDX4Q9NQI0 724 aaKnown RBP25.58■■□□□ 1.69
CIRBP-229ENST00000590704 TRPM7Q96QT4 1865 aa25.58■■□□□ 1.68
CIRBP-229ENST00000590704 TCP10L2B9ZVM9 353 aa25.57■■□□□ 1.68
CIRBP-229ENST00000590704 ERC2O15083 957 aa25.57■■□□□ 1.68
CIRBP-229ENST00000590704 MYO1BO43795 1136 aa25.57■■□□□ 1.68
CIRBP-229ENST00000590704 DYNLL1P63167 89 aaKnown RBP25.57■■□□□ 1.68
CIRBP-229ENST00000590704 GSTO1P78417 241 aa25.57■■□□□ 1.68
CIRBP-229ENST00000590704 SLC9C2Q5TAH2 1124 aa25.57■■□□□ 1.68
CIRBP-229ENST00000590704 IDI2Q9BXS1 227 aa25.57■■□□□ 1.68
CIRBP-229ENST00000590704 VEZTQ9HBM0 779 aa25.57■■□□□ 1.68
CIRBP-229ENST00000590704 ZNF532Q9HCE3 1301 aa25.56■■□□□ 1.68
CIRBP-229ENST00000590704 HSPA6P17066 643 aa25.56■■□□□ 1.68
CIRBP-229ENST00000590704 APLP1P51693 650 aa25.56■■□□□ 1.68
CIRBP-229ENST00000590704 HTRA3P83110 453 aa25.56■■□□□ 1.68
CIRBP-229ENST00000590704 SLF2Q8IX21 1173 aa25.56■■□□□ 1.68
CIRBP-229ENST00000590704 RIOK1Q9BRS2 568 aaKnown RBP25.56■■□□□ 1.68
CIRBP-229ENST00000590704 ZBTB47Q9UFB7 747 aaPredicted RBP25.56■■□□□ 1.68
CIRBP-229ENST00000590704 SSC5DA1L4H1 1573 aa25.56■■□□□ 1.68
CIRBP-229ENST00000590704 SH3BP5LQ7L8J4 393 aa25.55■■□□□ 1.68
CIRBP-229ENST00000590704 SH3RF3Q8TEJ3 882 aaPredicted RBP25.55■■□□□ 1.68
CIRBP-229ENST00000590704 TMEM39BQ9GZU3 492 aa25.55■■□□□ 1.68
CIRBP-229ENST00000590704 AATFQ9NY61 560 aaKnown RBP eCLIP25.55■■□□□ 1.68
CIRBP-229ENST00000590704 CEP350Q5VT06 3117 aa25.54■■□□□ 1.68
CIRBP-229ENST00000590704 NBPF12Q5TAG4 269 aaPredicted RBP25.54■■□□□ 1.68
CIRBP-229ENST00000590704 FAM83AQ86UY5 434 aa25.54■■□□□ 1.68
CIRBP-229ENST00000590704 MYH7P12883 1935 aa25.54■■□□□ 1.68
CIRBP-229ENST00000590704 TMED8Q6PL24 325 aaPredicted RBP25.53■■□□□ 1.68
CIRBP-229ENST00000590704 MIGA1Q8NAN2 632 aa25.53■■□□□ 1.68
CIRBP-229ENST00000590704 CCDC136Q96JN2 1154 aa25.53■■□□□ 1.68
CIRBP-229ENST00000590704 CDK5RAP2Q96SN8 1893 aa25.53■■□□□ 1.68
CIRBP-229ENST00000590704 CELF2O95319 508 aaKnown RBP25.53■■□□□ 1.68
CIRBP-229ENST00000590704 UBE3CQ15386 1083 aa25.53■■□□□ 1.68
CIRBP-229ENST00000590704 PPP4R2Q9NY27 417 aa25.53■■□□□ 1.68
CIRBP-229ENST00000590704 GSPT1P15170 499 aaKnown RBP25.52■■□□□ 1.68
CIRBP-229ENST00000590704 PUS7LQ9H0K6 701 aaKnown RBP25.52■■□□□ 1.68
CIRBP-229ENST00000590704 FZD1Q9UP38 647 aa25.52■■□□□ 1.68
CIRBP-229ENST00000590704 PPP2R3BQ9Y5P8 575 aa25.52■■□□□ 1.68
CIRBP-229ENST00000590704 RGS3P49796 1198 aa25.51■■□□□ 1.67
CIRBP-229ENST00000590704 FAM151AQ8WW52 585 aa25.51■■□□□ 1.67
CIRBP-229ENST00000590704 OSBP2Q969R2 916 aa25.51■■□□□ 1.67
CIRBP-229ENST00000590704 NPM3O75607 178 aaKnown RBP25.5■■□□□ 1.67
CIRBP-229ENST00000590704 TCP10Q12799 353 aa25.5■■□□□ 1.67
CIRBP-229ENST00000590704 MOB2Q70IA6 237 aa25.5■■□□□ 1.67
CIRBP-229ENST00000590704 MKRN1Q9UHC7 482 aaKnown RBP25.5■■□□□ 1.67
CIRBP-229ENST00000590704 TMEM88BA6NKF7 163 aa25.49■■□□□ 1.67
CIRBP-229ENST00000590704 SLURP2P0DP57 97 aa25.49■■□□□ 1.67
CIRBP-229ENST00000590704 DDTLA6NHG4 134 aaPredicted RBP25.48■■□□□ 1.67
CIRBP-229ENST00000590704 ENTPD3O75355 529 aa25.48■■□□□ 1.67
CIRBP-229ENST00000590704 TNFAIP1Q13829 316 aa25.48■■□□□ 1.67
CIRBP-229ENST00000590704 EVI5LQ96CN4 794 aa25.48■■□□□ 1.67
CIRBP-229ENST00000590704 CREBZFQ9NS37 354 aa25.48■■□□□ 1.67
CIRBP-229ENST00000590704 ATRNL1Q5VV63 1379 aa25.48■■□□□ 1.67
CIRBP-229ENST00000590704 FOCADQ5VW36 1801 aa25.48■■□□□ 1.67
CIRBP-229ENST00000590704 RNF113AO15541 343 aaKnown RBP25.47■■□□□ 1.67
CIRBP-229ENST00000590704 SAPCD2Q86UD0 394 aa25.47■■□□□ 1.67
CIRBP-229ENST00000590704 LCORLQ8N3X6 602 aa25.47■■□□□ 1.67
CIRBP-229ENST00000590704 ZNF408Q9H9D4 720 aa25.47■■□□□ 1.67
CIRBP-229ENST00000590704 BAG3O95817 575 aa25.47■■□□□ 1.67
CIRBP-229ENST00000590704 TEX11Q8IYF3 940 aa25.47■■□□□ 1.67
CIRBP-229ENST00000590704 DNAJC5GQ8N7S2 189 aa25.47■■□□□ 1.67
CIRBP-229ENST00000590704 SEC62Q99442 399 aaKnown RBP25.47■■□□□ 1.67
CIRBP-229ENST00000590704 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.47■■□□□ 1.671e-7■■■□□ 16.4
CIRBP-229ENST00000590704 TLL2Q9Y6L7 1015 aa25.47■■□□□ 1.67
CIRBP-229ENST00000590704 RPAP1Q9BWH6 1393 aaPredicted RBP25.47■■□□□ 1.67
CIRBP-229ENST00000590704 MAGEB6P1A0A0J9YX57 407 aa25.46■■□□□ 1.67
CIRBP-229ENST00000590704 USP2O75604 605 aaPredicted RBP25.46■■□□□ 1.67
CIRBP-229ENST00000590704 TTC22Q5TAA0 569 aa25.46■■□□□ 1.67
CIRBP-229ENST00000590704 TGFBRAP1Q8WUH2 860 aa25.46■■□□□ 1.67
CIRBP-229ENST00000590704 GBA2Q9HCG7 927 aaPredicted RBP25.46■■□□□ 1.67
CIRBP-229ENST00000590704 TMOD2Q9NZR1 351 aa25.46■■□□□ 1.67
CIRBP-229ENST00000590704 PRKAB2O43741 272 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms