RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 TTF2Q9UNY4 1162 aaKnown RBP8.38□□□□□ -1.07
DNMT1-222ENST00000590619 CRKP46108 304 aa8.37□□□□□ -1.07
DNMT1-222ENST00000590619 KCNJ4P48050 445 aa8.37□□□□□ -1.07
DNMT1-222ENST00000590619 CACNB3P54284 484 aa8.37□□□□□ -1.07
DNMT1-222ENST00000590619 LBHD1Q9BQE6 289 aaPredicted RBP8.37□□□□□ -1.07
DNMT1-222ENST00000590619 GJD2Q9UKL4 321 aa8.37□□□□□ -1.07
DNMT1-222ENST00000590619 CDH23Q9H251 3354 aa8.36□□□□□ -1.07
DNMT1-222ENST00000590619 CXCL11O14625 94 aa8.36□□□□□ -1.07
DNMT1-222ENST00000590619 SMAD3P84022 425 aaKnown RBP8.36□□□□□ -1.07
DNMT1-222ENST00000590619 C9orf50Q5SZB4 431 aa8.36□□□□□ -1.07
DNMT1-222ENST00000590619 ALYREFQ86V81 257 aaKnown RBP8.36□□□□□ -1.07
DNMT1-222ENST00000590619 ATXN2LQ8WWM7 1075 aaKnown RBP8.36□□□□□ -1.07
DNMT1-222ENST00000590619 COA7Q96BR5 231 aa8.36□□□□□ -1.07
DNMT1-222ENST00000590619 ASB2Q96Q27 587 aa8.36□□□□□ -1.07
DNMT1-222ENST00000590619 MPHOSPH8Q99549 860 aa8.36□□□□□ -1.07
DNMT1-222ENST00000590619 METTL22Q9BUU2 404 aaPredicted RBP8.36□□□□□ -1.07
DNMT1-222ENST00000590619 ZNF112Q9UJU3 913 aa8.36□□□□□ -1.07
DNMT1-222ENST00000590619 OTOFQ9HC10 1997 aa8.35□□□□□ -1.07
DNMT1-222ENST00000590619 HMGCRP04035 888 aa8.35□□□□□ -1.07
DNMT1-222ENST00000590619 ITGA6P23229 1130 aa8.35□□□□□ -1.07
DNMT1-222ENST00000590619 GOLGA2Q08379 1002 aa8.35□□□□□ -1.07
DNMT1-222ENST00000590619 GRIN2CQ14957 1233 aa8.35□□□□□ -1.07
DNMT1-222ENST00000590619 GRIK5Q16478 980 aa8.35□□□□□ -1.07
DNMT1-222ENST00000590619 MFSD14BQ5SR56 506 aa8.35□□□□□ -1.07
DNMT1-222ENST00000590619 ADAMTS19Q8TE59 1207 aa8.35□□□□□ -1.07
DNMT1-222ENST00000590619 C1QTNF1Q9BXJ1 281 aa8.35□□□□□ -1.07
DNMT1-222ENST00000590619 ZNF341Q9BYN7 854 aa8.35□□□□□ -1.07
DNMT1-222ENST00000590619 LAS1LQ9Y4W2 734 aaKnown RBP8.35□□□□□ -1.07
DNMT1-222ENST00000590619 H7C1W4 665 aa8.34□□□□□ -1.07
DNMT1-222ENST00000590619 IGKV5-2P06315 115 aa8.34□□□□□ -1.07
DNMT1-222ENST00000590619 CSF1RP07333 972 aa8.34□□□□□ -1.07
DNMT1-222ENST00000590619 HOXB7P09629 217 aa8.34□□□□□ -1.07
DNMT1-222ENST00000590619 DUSP27Q5VZP5 1158 aa8.34□□□□□ -1.07
DNMT1-222ENST00000590619 DCAF15Q66K64 600 aa8.34□□□□□ -1.07
DNMT1-222ENST00000590619 LHX8Q68G74 356 aa8.34□□□□□ -1.07
DNMT1-222ENST00000590619 FASTKD5Q7L8L6 764 aaKnown RBP8.34□□□□□ -1.07
DNMT1-222ENST00000590619 ZNF804AQ7Z570 1209 aa8.34□□□□□ -1.07
DNMT1-222ENST00000590619 FAM83AQ86UY5 434 aa8.34□□□□□ -1.07
DNMT1-222ENST00000590619 ANKRD13CQ8N6S4 541 aa8.34□□□□□ -1.07
DNMT1-222ENST00000590619 TDRD7Q8NHU6 1098 aaKnown RBP8.34□□□□□ -1.07
DNMT1-222ENST00000590619 HOOK2Q96ED9 719 aa8.34□□□□□ -1.07
DNMT1-222ENST00000590619 UHRF1Q96T88 793 aaPredicted RBP8.34□□□□□ -1.07
DNMT1-222ENST00000590619 LRFN3Q9BTN0 628 aa8.34□□□□□ -1.07
DNMT1-222ENST00000590619 DOCK3Q8IZD9 2030 aa8.34□□□□□ -1.07
DNMT1-222ENST00000590619 TMPOP42166 694 aaKnown RBP8.33□□□□□ -1.08
DNMT1-222ENST00000590619 PDE3AQ14432 1141 aa8.33□□□□□ -1.08
DNMT1-222ENST00000590619 MAP3K21Q5TCX8 1036 aa8.33□□□□□ -1.08
DNMT1-222ENST00000590619 PPM1EQ8WY54 764 aa8.33□□□□□ -1.08
DNMT1-222ENST00000590619 TRIB2Q92519 343 aa8.33□□□□□ -1.08
DNMT1-222ENST00000590619 SENP6Q9GZR1 1112 aaPredicted RBP8.33□□□□□ -1.08
DNMT1-222ENST00000590619 PNNQ9H307 717 aaKnown RBP8.33□□□□□ -1.08
DNMT1-222ENST00000590619 SLC45A1Q9Y2W3 748 aa8.33□□□□□ -1.08
DNMT1-222ENST00000590619 ZHX2Q9Y6X8 837 aa8.33□□□□□ -1.08
DNMT1-222ENST00000590619 DLG5Q8TDM6 1919 aa8.33□□□□□ -1.08
DNMT1-222ENST00000590619 A0A0G2JLL6 359 aaPredicted RBP8.32□□□□□ -1.08
DNMT1-222ENST00000590619 MRPS5P82675 430 aaKnown RBP8.32□□□□□ -1.08
DNMT1-222ENST00000590619 HDLBPQ00341 1268 aaKnown RBP8.32□□□□□ -1.08
DNMT1-222ENST00000590619 NOL9Q5SY16 702 aaKnown RBP8.32□□□□□ -1.08
DNMT1-222ENST00000590619 FKBP1CQ5VVH2 108 aa8.32□□□□□ -1.08
DNMT1-222ENST00000590619 APOBEC3HQ6NTF7 200 aaKnown RBP8.32□□□□□ -1.08
DNMT1-222ENST00000590619 PRRT2Q7Z6L0 340 aaPredicted RBP8.32□□□□□ -1.08
DNMT1-222ENST00000590619 NECAB3Q96P71 396 aaPredicted RBP8.32□□□□□ -1.08
DNMT1-222ENST00000590619 MRIQ9BWK5 157 aa8.32□□□□□ -1.08
DNMT1-222ENST00000590619 EPHX3Q9H6B9 360 aa8.32□□□□□ -1.08
DNMT1-222ENST00000590619 MAP3K2Q9Y2U5 619 aa8.32□□□□□ -1.08
DNMT1-222ENST00000590619 AFG3L2Q9Y4W6 797 aa8.32□□□□□ -1.08
DNMT1-222ENST00000590619 NCOR1O75376 2440 aa8.32□□□□□ -1.08
DNMT1-222ENST00000590619 MAPK8IP3Q9UPT6 1336 aa8.31□□□□□ -1.08
DNMT1-222ENST00000590619 PRKAR2AP13861 404 aaKnown RBP8.31□□□□□ -1.08
DNMT1-222ENST00000590619 CYP2B6P20813 491 aa8.31□□□□□ -1.08
DNMT1-222ENST00000590619 ATN1P54259 1190 aaPredicted RBP8.31□□□□□ -1.08
DNMT1-222ENST00000590619 CACNB2Q08289 660 aaPredicted RBP8.31□□□□□ -1.08
DNMT1-222ENST00000590619 POTEEQ6S8J3 1075 aa8.31□□□□□ -1.08
DNMT1-222ENST00000590619 GADL1Q6ZQY3 521 aa8.31□□□□□ -1.08
DNMT1-222ENST00000590619 SMCR8Q8TEV9 937 aaPredicted RBP8.31□□□□□ -1.08
DNMT1-222ENST00000590619 BADQ92934 168 aa8.31□□□□□ -1.08
DNMT1-222ENST00000590619 FAM84BQ96KN1 310 aaPredicted RBP8.31□□□□□ -1.08
DNMT1-222ENST00000590619 ZDHHC15Q96MV8 337 aa8.31□□□□□ -1.08
DNMT1-222ENST00000590619 PLA2G12BQ9BX93 195 aa8.31□□□□□ -1.08
DNMT1-222ENST00000590619 HCN4Q9Y3Q4 1203 aa8.31□□□□□ -1.08
DNMT1-222ENST00000590619 ECM29Q5VYK3 1845 aa8.31□□□□□ -1.08
DNMT1-222ENST00000590619 MGAMO43451 1857 aa8.3□□□□□ -1.08
DNMT1-222ENST00000590619 PIEZO1Q92508 2521 aa8.3□□□□□ -1.08
DNMT1-222ENST00000590619 PI4KAP2A4QPH2 592 aa8.3□□□□□ -1.08
DNMT1-222ENST00000590619 PHF20L1A8MW92 1017 aa8.3□□□□□ -1.08
DNMT1-222ENST00000590619 ELL2O00472 640 aaPredicted RBP8.3□□□□□ -1.08
DNMT1-222ENST00000590619 PLIN1O60240 522 aa8.3□□□□□ -1.08
DNMT1-222ENST00000590619 BMP1P13497 986 aa8.3□□□□□ -1.08
DNMT1-222ENST00000590619 PTPRAP18433 802 aa8.3□□□□□ -1.08
DNMT1-222ENST00000590619 CCND3P30281 292 aaPredicted RBP8.3□□□□□ -1.08
DNMT1-222ENST00000590619 HIBADHP31937 336 aaKnown RBP8.3□□□□□ -1.08
DNMT1-222ENST00000590619 GYG1P46976 350 aa8.3□□□□□ -1.08
DNMT1-222ENST00000590619 FAM110CQ1W6H9 321 aa8.3□□□□□ -1.08
DNMT1-222ENST00000590619 CWF19L2Q2TBE0 894 aaKnown RBP8.3□□□□□ -1.08
DNMT1-222ENST00000590619 KSR2Q6VAB6 950 aa8.3□□□□□ -1.08
DNMT1-222ENST00000590619 UBE3BQ7Z3V4 1068 aa8.3□□□□□ -1.08
DNMT1-222ENST00000590619 PI4KAP1Q8N8J0 262 aa8.3□□□□□ -1.08
DNMT1-222ENST00000590619 FAM151AQ8WW52 585 aa8.3□□□□□ -1.08
DNMT1-222ENST00000590619 DDX60LQ5H9U9 1706 aaKnown RBP8.29□□□□□ -1.08
DNMT1-222ENST00000590619 ANKRD18BA2A2Z9 1011 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms