RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 USP17L1Q7RTZ2 530 aa20.2■□□□□ 0.82
GCDH-212ENST00000590530 IFNL3Q8IZI9 196 aa20.2■□□□□ 0.82
GCDH-212ENST00000590530 JAKMIP1Q96N16 626 aaKnown RBP20.2■□□□□ 0.82
GCDH-212ENST00000590530 ZSWIM6Q9HCJ5 1215 aa20.2■□□□□ 0.82
GCDH-212ENST00000590530 EVX2Q03828 476 aa20.19■□□□□ 0.82
GCDH-212ENST00000590530 KIAA0825Q8IV33 1275 aa20.19■□□□□ 0.82
GCDH-212ENST00000590530 SH3RF3Q8TEJ3 882 aaPredicted RBP20.19■□□□□ 0.82
GCDH-212ENST00000590530 NBPF3Q9H094 633 aa20.19■□□□□ 0.82
GCDH-212ENST00000590530 TTF2Q9UNY4 1162 aaKnown RBP20.19■□□□□ 0.82
GCDH-212ENST00000590530 PSMA5P28066 241 aa20.18■□□□□ 0.82
GCDH-212ENST00000590530 KRT32Q14532 448 aa20.18■□□□□ 0.82
GCDH-212ENST00000590530 NKX2-3Q8TAU0 364 aa20.18■□□□□ 0.82
GCDH-212ENST00000590530 MROH7-TTC4A0A0A0MT08 1334 aa20.18■□□□□ 0.82
GCDH-212ENST00000590530 CASTP20810 708 aaKnown RBP20.18■□□□□ 0.82
GCDH-212ENST00000590530 INCENPQ9NQS7 918 aa20.18■□□□□ 0.82
GCDH-212ENST00000590530 TACC3Q9Y6A5 838 aa20.18■□□□□ 0.82
GCDH-212ENST00000590530 FER1L6Q2WGJ9 1857 aa20.17■□□□□ 0.82
GCDH-212ENST00000590530 MAST2Q6P0Q8 1798 aa20.17■□□□□ 0.82
GCDH-212ENST00000590530 BTDP43251 543 aa20.17■□□□□ 0.82
GCDH-212ENST00000590530 TMX3Q96JJ7 454 aa20.17■□□□□ 0.82
GCDH-212ENST00000590530 TCEANC2Q96MN5 208 aa20.17■□□□□ 0.82
GCDH-212ENST00000590530 DAGLAQ9Y4D2 1042 aa20.17■□□□□ 0.82
GCDH-212ENST00000590530 CYP46A1Q9Y6A2 500 aa20.17■□□□□ 0.82
GCDH-212ENST00000590530 ZNF646O15015 1829 aaPredicted RBP20.17■□□□□ 0.82
GCDH-212ENST00000590530 PSMD14O00487 310 aa20.16■□□□□ 0.82
GCDH-212ENST00000590530 GSTO1P78417 241 aa20.16■□□□□ 0.82
GCDH-212ENST00000590530 LARP6Q9BRS8 491 aaKnown RBP20.16■□□□□ 0.82
GCDH-212ENST00000590530 ZBTB12Q9Y330 459 aaPredicted RBP20.16■□□□□ 0.82
GCDH-212ENST00000590530 CYP2D7A0A087X1C5 515 aa20.16■□□□□ 0.82
GCDH-212ENST00000590530 GPR75-ASB3A0A0A6YYF3 556 aa20.16■□□□□ 0.82
GCDH-212ENST00000590530 CUL4AQ13619 759 aa20.16■□□□□ 0.82
GCDH-212ENST00000590530 RUFY3Q7L099 469 aa20.16■□□□□ 0.82
GCDH-212ENST00000590530 TBC1D10CQ8IV04 446 aa20.16■□□□□ 0.82
GCDH-212ENST00000590530 NIM1KQ8IY84 436 aa20.16■□□□□ 0.82
GCDH-212ENST00000590530 GAKO14976 1311 aa20.15■□□□□ 0.82
GCDH-212ENST00000590530 E7EWF7 191 aa20.15■□□□□ 0.82
GCDH-212ENST00000590530 YBX3P16989 372 aaKnown RBP eCLIP20.15■□□□□ 0.82
GCDH-212ENST00000590530 ALX1Q15699 326 aa20.15■□□□□ 0.82
GCDH-212ENST00000590530 STK11IPQ8N1F8 1099 aa20.15■□□□□ 0.82
GCDH-212ENST00000590530 ZNRF3Q9ULT6 936 aa20.15■□□□□ 0.82
GCDH-212ENST00000590530 ADAMTSL1Q8N6G6 1762 aa20.14■□□□□ 0.82
GCDH-212ENST00000590530 CCDC88AQ3V6T2 1871 aa20.14■□□□□ 0.81
GCDH-212ENST00000590530 GNAT2P19087 354 aa20.14■□□□□ 0.81
GCDH-212ENST00000590530 RHBDL3P58872 404 aa20.14■□□□□ 0.81
GCDH-212ENST00000590530 PPP4CP60510 307 aa20.14■□□□□ 0.81
GCDH-212ENST00000590530 CTDSPL2Q05D32 466 aa20.14■□□□□ 0.81
GCDH-212ENST00000590530 CXCL9Q07325 125 aa20.14■□□□□ 0.81
GCDH-212ENST00000590530 NOL8Q76FK4 1167 aaKnown RBP20.14■□□□□ 0.81
GCDH-212ENST00000590530 FAM163AQ96GL9 167 aaPredicted RBP20.14■□□□□ 0.81
GCDH-212ENST00000590530 NAPBQ9H115 298 aa20.14■□□□□ 0.81
GCDH-212ENST00000590530 VPS33BQ9H267 617 aa20.14■□□□□ 0.81
GCDH-212ENST00000590530 CTNNA3Q9UI47 895 aa20.14■□□□□ 0.81
GCDH-212ENST00000590530 SUGT1Q9Y2Z0 365 aa20.14■□□□□ 0.81
GCDH-212ENST00000590530 LDHCP07864 332 aa20.13■□□□□ 0.81
GCDH-212ENST00000590530 TDO2P48775 406 aa20.13■□□□□ 0.81
GCDH-212ENST00000590530 AK2P54819 239 aa20.13■□□□□ 0.81
GCDH-212ENST00000590530 IMMTQ16891 758 aaKnown RBP20.13■□□□□ 0.81
GCDH-212ENST00000590530 SLC4A8Q2Y0W8 1093 aa20.13■□□□□ 0.81
GCDH-212ENST00000590530 ARHGAP27Q6ZUM4 889 aa20.13■□□□□ 0.81
GCDH-212ENST00000590530 ALDH8A1Q9H2A2 487 aaPredicted RBP20.13■□□□□ 0.81
GCDH-212ENST00000590530 CWC22Q9HCG8 908 aaKnown RBP20.13■□□□□ 0.81
GCDH-212ENST00000590530 PDRG1Q9NUG6 133 aa20.13■□□□□ 0.81
GCDH-212ENST00000590530 ZNF213O14771 459 aa20.13■□□□□ 0.81
GCDH-212ENST00000590530 BLOC1S2Q6QNY1 142 aa20.13■□□□□ 0.81
GCDH-212ENST00000590530 INTS4Q96HW7 963 aaKnown RBP20.13■□□□□ 0.81
GCDH-212ENST00000590530 DCP1AQ9NPI6 582 aaPredicted RBP20.13■□□□□ 0.81
GCDH-212ENST00000590530 MYH2Q9UKX2 1941 aa20.13■□□□□ 0.81
GCDH-212ENST00000590530 LAMA4Q16363 1823 aa20.12■□□□□ 0.81
GCDH-212ENST00000590530 VIL1P09327 827 aaKnown RBP20.12■□□□□ 0.81
GCDH-212ENST00000590530 CYP2D6P10635 497 aa20.12■□□□□ 0.81
GCDH-212ENST00000590530 FKBP1AP62942 108 aaKnown RBP20.12■□□□□ 0.81
GCDH-212ENST00000590530 RSBN1LQ6PCB5 846 aaPredicted RBP20.12■□□□□ 0.81
GCDH-212ENST00000590530 TGFBRAP1Q8WUH2 860 aa20.12■□□□□ 0.81
GCDH-212ENST00000590530 CRNKL1Q9BZJ0 848 aaKnown RBP20.12■□□□□ 0.81
GCDH-212ENST00000590530 LTBP3Q9NS15 1303 aa20.12■□□□□ 0.81
GCDH-212ENST00000590530 RPS6KB1P23443 525 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 CRKP46108 304 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 NFKBIBQ15653 356 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 APOBEC3HQ6NTF7 200 aaKnown RBP20.11■□□□□ 0.81
GCDH-212ENST00000590530 CHST3Q7LGC8 479 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 NEK1Q96PY6 1258 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 GMLQ99445 158 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 MKRN1Q9UHC7 482 aaKnown RBP20.11■□□□□ 0.81
GCDH-212ENST00000590530 LIMCH1Q9UPQ0 1083 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 MINDY4BA8MYZ0 360 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 IGSF3O75054 1194 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 BAG3O95817 575 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 CTR9Q6PD62 1173 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 TMED8Q6PL24 325 aaPredicted RBP20.11■□□□□ 0.81
GCDH-212ENST00000590530 MAPKAPK5Q8IW41 473 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 LRRC2Q9BYS8 371 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 NACAP1Q9BZK3 213 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 FOXD4L1Q9NU39 408 aa20.11■□□□□ 0.81
GCDH-212ENST00000590530 SHTN1A0MZ66 631 aa20.1■□□□□ 0.81
GCDH-212ENST00000590530 USP17L12C9JPN9 530 aa20.1■□□□□ 0.81
GCDH-212ENST00000590530 USP17L21D6R901 530 aa20.1■□□□□ 0.81
GCDH-212ENST00000590530 USP17L8P0C7I0 530 aa20.1■□□□□ 0.81
GCDH-212ENST00000590530 JDP2Q8WYK2 163 aa20.1■□□□□ 0.81
GCDH-212ENST00000590530 ARFGEF1Q9Y6D6 1849 aa20.1■□□□□ 0.81
GCDH-212ENST00000590530 ZMYM6O95789 1325 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms