RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 NPHP4O75161 1426 aaPredicted RBP8.8□□□□□ -1
NEDD4L-229ENST00000590506 FRMPD1Q5SYB0 1578 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 A0A0D9SFI3 127 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 PFKFB2O60825 505 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 POLA2Q14181 598 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 STK38Q15208 465 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 SLC35F6Q8N357 371 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 OTUD6BQ8N6M0 293 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 CAPS2Q9BXY5 557 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 VIPAS39Q9H9C1 493 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 GPBP1L1Q9HC44 474 aaPredicted RBP8.8□□□□□ -1
NEDD4L-229ENST00000590506 CLIC4Q9Y696 253 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 ZC3H4Q9UPT8 1303 aaKnown RBP8.8□□□□□ -1
NEDD4L-229ENST00000590506 CTAGE9A4FU28 777 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 GOLGA6CA6NDK9 693 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 KIAA0754O94854 1291 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 GOLGA6DP0CG33 693 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 CCNHP51946 323 aaPredicted RBP8.8□□□□□ -1
NEDD4L-229ENST00000590506 NCAPH2Q6IBW4 605 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 NAA16Q6N069 864 aaPredicted RBP8.8□□□□□ -1
NEDD4L-229ENST00000590506 FMNL3Q8IVF7 1028 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 XAGE2Q96GT9 111 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 GOLGA6AQ9NYA3 693 aa8.8□□□□□ -1
NEDD4L-229ENST00000590506 MAP3K5Q99683 1374 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 ABCC6O95255 1503 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 GRIN2DO15399 1336 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 NUTM2FA1L443 756 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 PTPDC1A2A3K4 754 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 EIF3HO15372 352 aaKnown RBP eCLIP8.79□□□□□ -1
NEDD4L-229ENST00000590506 SKAP2O75563 359 aaPredicted RBP8.79□□□□□ -1
NEDD4L-229ENST00000590506 CLNS1AP54105 237 aaKnown RBP8.79□□□□□ -1
NEDD4L-229ENST00000590506 IRX1P78414 480 aaPredicted RBP8.79□□□□□ -1
NEDD4L-229ENST00000590506 TBC1D8BQ0IIM8 1120 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 PPFIA1Q13136 1202 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 NUTM2GQ5VZR2 741 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 WAPLQ7Z5K2 1190 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 AMOTL1Q8IY63 956 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 GSPT2Q8IYD1 628 aaKnown RBP8.79□□□□□ -1
NEDD4L-229ENST00000590506 NSUN7Q8NE18 718 aaKnown RBP8.79□□□□□ -1
NEDD4L-229ENST00000590506 SMARCC2Q8TAQ2 1214 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 CDC5LQ99459 802 aaKnown RBP8.79□□□□□ -1
NEDD4L-229ENST00000590506 TRIM6Q9C030 488 aaPredicted RBP8.79□□□□□ -1
NEDD4L-229ENST00000590506 ECHDC1Q9NTX5 307 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 SH3BP1Q9Y3L3 701 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 XRN1Q8IZH2 1706 aaKnown RBP8.79□□□□□ -1
NEDD4L-229ENST00000590506 USP42Q9H9J4 1324 aaKnown RBP8.79□□□□□ -1
NEDD4L-229ENST00000590506 POGZQ7Z3K3 1410 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 A0A1W2PQ27 194 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 A0A1W2PQ64 194 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 A0A1W2PQD8 194 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 KLHL33A6NCF5 533 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 ZMYND10O75800 440 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 FSBPO95073 299 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 CCT2P78371 535 aaKnown RBP8.79□□□□□ -1
NEDD4L-229ENST00000590506 EIF4A2Q14240 407 aaKnown RBP8.79□□□□□ -1
NEDD4L-229ENST00000590506 RAD9BQ6WBX8 426 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 EVI5LQ96CN4 794 aa8.79□□□□□ -1
NEDD4L-229ENST00000590506 AGPSO00116 658 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 CTDNEP1O95476 244 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 ERCC3P19447 782 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 WDR93Q6P2C0 686 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 ZNF589Q86UQ0 364 aaPredicted RBP8.78□□□□□ -1
NEDD4L-229ENST00000590506 CEP57Q86XR8 500 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 CRACR2AQ9BSW2 395 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 KLC4Q9NSK0 619 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 ADGRG1Q9Y653 693 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 CRB1P82279 1406 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 EME2A4GXA9 379 aaPredicted RBP8.78□□□□□ -1
NEDD4L-229ENST00000590506 ABL1P00519 1130 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 POLR3DP05423 398 aaPredicted RBP8.78□□□□□ -1
NEDD4L-229ENST00000590506 PFKFB1P16118 471 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 TUBB4BP68371 445 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 PNOCQ13519 176 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 CRYMQ14894 314 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 ATL3Q6DD88 541 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 OTUD7BQ6GQQ9 843 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 LINC00301Q8NCQ3 95 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 CCDC148Q8NFR7 591 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 COG1Q8WTW3 980 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 NEK1Q96PY6 1258 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 NCOA5Q9HCD5 579 aaKnown RBP8.78□□□□□ -1
NEDD4L-229ENST00000590506 RTEL1Q9NZ71 1219 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 KIDINS220Q9ULH0 1771 aa8.78□□□□□ -1
NEDD4L-229ENST00000590506 NDUFAB1O14561 156 aa8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 FOXO3O43524 673 aa8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 PIP4K2BP78356 416 aa8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 WHAMMP3Q1A5X7 153 aa8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 CEP85LQ5SZL2 805 aa8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 WLSQ5T9L3 541 aa8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 RNF187Q5TA31 235 aaPredicted RBP8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 SPECC1LQ69YQ0 1117 aa8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 CLASRPQ8N2M8 674 aaKnown RBP8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 CPLX3Q8WVH0 158 aa8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 RNF25Q96BH1 459 aaPredicted RBP8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 NAPGQ99747 312 aaPredicted RBP8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 DDX20Q9UHI6 824 aaKnown RBP8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 ARHGEF10O15013 1369 aa8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 CLTCQ00610 1675 aaKnown RBP8.77□□□□□ -1.01
NEDD4L-229ENST00000590506 SPTLC2O15270 562 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms