RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 SLFNL1Q499Z3 407 aa14.55□□□□□ -0.08
APOC1-206ENST00000590334 TBC1D10BQ4KMP7 808 aaPredicted RBP14.55□□□□□ -0.08
APOC1-206ENST00000590334 ZMYM1Q5SVZ6 1142 aa14.55□□□□□ -0.08
APOC1-206ENST00000590334 PNMA8AQ86V59 439 aaPredicted RBP14.55□□□□□ -0.08
APOC1-206ENST00000590334 TRPM4Q8TD43 1214 aa14.55□□□□□ -0.08
APOC1-206ENST00000590334 NMRK2Q9NPI5 230 aa14.55□□□□□ -0.08
APOC1-206ENST00000590334 PGAP2Q9UHJ9 254 aa14.55□□□□□ -0.08
APOC1-206ENST00000590334 BAG3O95817 575 aa14.54□□□□□ -0.08
APOC1-206ENST00000590334 BTDP43251 543 aa14.54□□□□□ -0.08
APOC1-206ENST00000590334 NBPF9Q3BBW0 867 aa14.54□□□□□ -0.08
APOC1-206ENST00000590334 ZC3H15Q8WU90 426 aaKnown RBP14.54□□□□□ -0.08
APOC1-206ENST00000590334 OSBP2Q969R2 916 aa14.54□□□□□ -0.08
APOC1-206ENST00000590334 RIOK1Q9BRS2 568 aaKnown RBP14.54□□□□□ -0.08
APOC1-206ENST00000590334 NOL10Q9BSC4 688 aaKnown RBP14.54□□□□□ -0.08
APOC1-206ENST00000590334 HELLSQ9NRZ9 838 aa14.54□□□□□ -0.08
APOC1-206ENST00000590334 PITPNM2Q9BZ72 1349 aa14.53□□□□□ -0.08
APOC1-206ENST00000590334 MAGEB6P1A0A0J9YX57 407 aa14.53□□□□□ -0.08
APOC1-206ENST00000590334 MYO1BO43795 1136 aa14.53□□□□□ -0.08
APOC1-206ENST00000590334 PLCG2P16885 1265 aa14.53□□□□□ -0.08
APOC1-206ENST00000590334 CHMLP26374 656 aa14.53□□□□□ -0.08
APOC1-206ENST00000590334 RHBDL3P58872 404 aa14.53□□□□□ -0.08
APOC1-206ENST00000590334 SPDYE2Q495Y8 402 aa14.53□□□□□ -0.08
APOC1-206ENST00000590334 RBM26Q5T8P6 1007 aaKnown RBP14.53□□□□□ -0.08
APOC1-206ENST00000590334 CDC42EP5Q6NZY7 148 aa14.53□□□□□ -0.08
APOC1-206ENST00000590334 ZNF526Q8TF50 670 aaPredicted RBP14.53□□□□□ -0.08
APOC1-206ENST00000590334 PUS7LQ9H0K6 701 aaKnown RBP14.53□□□□□ -0.08
APOC1-206ENST00000590334 AATFQ9NY61 560 aaKnown RBP eCLIP14.53□□□□□ -0.08
APOC1-206ENST00000590334 BAZ2AQ9UIF9 1905 aaKnown RBP14.53□□□□□ -0.08
APOC1-206ENST00000590334 LAMB1P07942 1786 aa14.52□□□□□ -0.08
APOC1-206ENST00000590334 A0A0D9SFI3 127 aa14.52□□□□□ -0.09
APOC1-206ENST00000590334 NMIQ13287 307 aaPredicted RBP14.52□□□□□ -0.09
APOC1-206ENST00000590334 FKBP1CQ5VVH2 108 aa14.52□□□□□ -0.09
APOC1-206ENST00000590334 MIGA1Q8NAN2 632 aa14.52□□□□□ -0.09
APOC1-206ENST00000590334 FAM227BQ96M60 508 aa14.52□□□□□ -0.09
APOC1-206ENST00000590334 TDRD3Q9H7E2 651 aaKnown RBP14.52□□□□□ -0.09
APOC1-206ENST00000590334 GPBP1L1Q9HC44 474 aaPredicted RBP14.52□□□□□ -0.09
APOC1-206ENST00000590334 DIAPH3Q9NSV4 1193 aa14.52□□□□□ -0.09
APOC1-206ENST00000590334 USP40Q9NVE5 1235 aa14.52□□□□□ -0.09
APOC1-206ENST00000590334 ZNF70Q9UC06 446 aaPredicted RBP14.52□□□□□ -0.09
APOC1-206ENST00000590334 LAMA4Q16363 1823 aa14.51□□□□□ -0.09
APOC1-206ENST00000590334 M0R2C6 588 aa14.51□□□□□ -0.09
APOC1-206ENST00000590334 NPM3O75607 178 aaKnown RBP14.51□□□□□ -0.09
APOC1-206ENST00000590334 DYNLL1P63167 89 aaKnown RBP14.51□□□□□ -0.09
APOC1-206ENST00000590334 MCMDC2Q4G0Z9 681 aa14.51□□□□□ -0.09
APOC1-206ENST00000590334 SH3RF3Q8TEJ3 882 aaPredicted RBP14.51□□□□□ -0.09
APOC1-206ENST00000590334 STRBPQ96SI9 672 aaKnown RBP14.51□□□□□ -0.09
APOC1-206ENST00000590334 SEC62Q99442 399 aaKnown RBP14.51□□□□□ -0.09
APOC1-206ENST00000590334 IDI2Q9BXS1 227 aa14.51□□□□□ -0.09
APOC1-206ENST00000590334 COL2A1P02458 1487 aaPredicted RBP14.5□□□□□ -0.09
APOC1-206ENST00000590334 ASTN2O75129 1339 aaPredicted RBP14.5□□□□□ -0.09
APOC1-206ENST00000590334 RAD50Q92878 1312 aa14.5□□□□□ -0.09
APOC1-206ENST00000590334 CDC45O75419 566 aa14.5□□□□□ -0.09
APOC1-206ENST00000590334 WDHD1O75717 1129 aaPredicted RBP14.5□□□□□ -0.09
APOC1-206ENST00000590334 MBD4O95243 580 aa14.5□□□□□ -0.09
APOC1-206ENST00000590334 LDHDQ86WU2 507 aa14.5□□□□□ -0.09
APOC1-206ENST00000590334 LCORLQ8N3X6 602 aa14.5□□□□□ -0.09
APOC1-206ENST00000590334 ZNF784Q8NCA9 323 aaPredicted RBP14.5□□□□□ -0.09
APOC1-206ENST00000590334 AIDAQ96BJ3 306 aa14.5□□□□□ -0.09
APOC1-206ENST00000590334 SIPA1L1O43166 1804 aa14.5□□□□□ -0.09
APOC1-206ENST00000590334 TRPM7Q96QT4 1865 aa14.49□□□□□ -0.09
APOC1-206ENST00000590334 CLRN2A0PK11 232 aa14.49□□□□□ -0.09
APOC1-206ENST00000590334 KIF3CO14782 793 aa14.49□□□□□ -0.09
APOC1-206ENST00000590334 GPAA1O43292 621 aa14.49□□□□□ -0.09
APOC1-206ENST00000590334 GNAT2P19087 354 aa14.49□□□□□ -0.09
APOC1-206ENST00000590334 EAPPQ56P03 285 aaPredicted RBP14.49□□□□□ -0.09
APOC1-206ENST00000590334 ANGEL2Q5VTE6 544 aaKnown RBP14.49□□□□□ -0.09
APOC1-206ENST00000590334 CWC27Q6UX04 472 aaKnown RBP14.49□□□□□ -0.09
APOC1-206ENST00000590334 FAM83AQ86UY5 434 aa14.49□□□□□ -0.09
APOC1-206ENST00000590334 APOBEC3FQ8IUX4 373 aaKnown RBP14.49□□□□□ -0.09
APOC1-206ENST00000590334 TEX11Q8IYF3 940 aa14.49□□□□□ -0.09
APOC1-206ENST00000590334 RUFY2Q8WXA3 655 aa14.49□□□□□ -0.09
APOC1-206ENST00000590334 CRNKL1Q9BZJ0 848 aaKnown RBP14.49□□□□□ -0.09
APOC1-206ENST00000590334 ARMT1Q9H993 441 aa14.49□□□□□ -0.09
APOC1-206ENST00000590334 GGA3Q9NZ52 723 aa14.49□□□□□ -0.09
APOC1-206ENST00000590334 TMOD2Q9NZR1 351 aa14.49□□□□□ -0.09
APOC1-206ENST00000590334 CNTNAP1P78357 1384 aa14.48□□□□□ -0.09
APOC1-206ENST00000590334 RPAP1Q9BWH6 1393 aaPredicted RBP14.48□□□□□ -0.09
APOC1-206ENST00000590334 CCDC171Q6TFL3 1326 aa14.48□□□□□ -0.09
APOC1-206ENST00000590334 SGSM2O43147 1006 aa14.48□□□□□ -0.09
APOC1-206ENST00000590334 ENTPD3O75355 529 aa14.48□□□□□ -0.09
APOC1-206ENST00000590334 POTEIP0CG38 1075 aa14.48□□□□□ -0.09
APOC1-206ENST00000590334 POTEJP0CG39 1038 aa14.48□□□□□ -0.09
APOC1-206ENST00000590334 MFAP1P55081 439 aaKnown RBP14.48□□□□□ -0.09
APOC1-206ENST00000590334 IL25Q9H293 177 aa14.48□□□□□ -0.09
APOC1-206ENST00000590334 FAM198AQ9UFP1 575 aa14.48□□□□□ -0.09
APOC1-206ENST00000590334 MKRN1Q9UHC7 482 aaKnown RBP14.48□□□□□ -0.09
APOC1-206ENST00000590334 TNNI2P48788 182 aa14.47□□□□□ -0.09
APOC1-206ENST00000590334 CACNB3P54284 484 aa14.47□□□□□ -0.09
APOC1-206ENST00000590334 NFIAQ12857 509 aa14.47□□□□□ -0.09
APOC1-206ENST00000590334 TNFAIP1Q13829 316 aa14.47□□□□□ -0.09
APOC1-206ENST00000590334 GIMAP6Q6P9H5 292 aa14.47□□□□□ -0.09
APOC1-206ENST00000590334 CASC1Q6TDU7 716 aa14.47□□□□□ -0.09
APOC1-206ENST00000590334 CCDC129Q6ZRS4 1044 aa14.47□□□□□ -0.09
APOC1-206ENST00000590334 ZNF589Q86UQ0 364 aaPredicted RBP14.47□□□□□ -0.09
APOC1-206ENST00000590334 FAM151AQ8WW52 585 aa14.47□□□□□ -0.09
APOC1-206ENST00000590334 DCPSQ96C86 337 aaKnown RBP14.47□□□□□ -0.09
APOC1-206ENST00000590334 ESYT1Q9BSJ8 1104 aa14.47□□□□□ -0.09
APOC1-206ENST00000590334 DDX4Q9NQI0 724 aaKnown RBP14.47□□□□□ -0.09
APOC1-206ENST00000590334 ATP8A2Q9NTI2 1148 aa14.47□□□□□ -0.09
APOC1-206ENST00000590334 PPP2R3BQ9Y5P8 575 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms