RNA–Protein interactions for RNA: ENST00000590278.1

LRP3-203, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 3,278 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-203ENST00000590278 NKX2-3Q8TAU0 364 aa16.92■□□□□ 0.3
LRP3-203ENST00000590278 ANGEL1Q9UNK9 670 aaKnown RBP16.92■□□□□ 0.3
LRP3-203ENST00000590278 AKAP2Q9Y2D5 859 aa16.92■□□□□ 0.3
LRP3-203ENST00000590278 PCDHA5Q9Y5H7 936 aa16.92■□□□□ 0.3
LRP3-203ENST00000590278 OVOS2A0A0G2JMS6 1433 aa16.92■□□□□ 0.3
LRP3-203ENST00000590278 KARSQ15046 597 aaKnown RBP16.92■□□□□ 0.3
LRP3-203ENST00000590278 TOM1L2Q6ZVM7 507 aa16.92■□□□□ 0.3
LRP3-203ENST00000590278 CCDC34Q96HJ3 373 aa16.92■□□□□ 0.3
LRP3-203ENST00000590278 ZKSCAN3Q9BRR0 538 aa16.92■□□□□ 0.3
LRP3-203ENST00000590278 CDC27P30260 824 aa16.92■□□□□ 0.3
LRP3-203ENST00000590278 CYB5R4Q7L1T6 521 aa16.92■□□□□ 0.3
LRP3-203ENST00000590278 CPLX3Q8WVH0 158 aa16.92■□□□□ 0.3
LRP3-203ENST00000590278 DESI2Q9BSY9 194 aa16.92■□□□□ 0.3
LRP3-203ENST00000590278 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.92■□□□□ 0.3
LRP3-203ENST00000590278 ZFYP08048 801 aaPredicted RBP16.91■□□□□ 0.3
LRP3-203ENST00000590278 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
LRP3-203ENST00000590278 TBC1D10CQ8IV04 446 aa16.91■□□□□ 0.3
LRP3-203ENST00000590278 GRAMD1CQ8IYS0 662 aa16.91■□□□□ 0.3
LRP3-203ENST00000590278 CCDC191Q8NCU4 936 aa16.91■□□□□ 0.3
LRP3-203ENST00000590278 KCNH3Q9ULD8 1083 aa16.91■□□□□ 0.3
LRP3-203ENST00000590278 A0A0G2JS52 829 aa16.91■□□□□ 0.3
LRP3-203ENST00000590278 ZBTB43O43298 467 aa16.91■□□□□ 0.3
LRP3-203ENST00000590278 TMEM67Q5HYA8 995 aa16.91■□□□□ 0.3
LRP3-203ENST00000590278 KLHL10Q6JEL2 608 aa16.91■□□□□ 0.3
LRP3-203ENST00000590278 HELBQ8NG08 1087 aaPredicted RBP16.91■□□□□ 0.3
LRP3-203ENST00000590278 GPR108Q9NPR9 543 aa16.91■□□□□ 0.3
LRP3-203ENST00000590278 EVCP57679 992 aa16.9■□□□□ 0.3
LRP3-203ENST00000590278 KCNJ14Q9UNX9 436 aa16.9■□□□□ 0.3
LRP3-203ENST00000590278 MRC1P22897 1456 aa16.9■□□□□ 0.3
LRP3-203ENST00000590278 NEDD4P46934 1319 aa16.9■□□□□ 0.3
LRP3-203ENST00000590278 ATF3P18847 181 aa16.9■□□□□ 0.3
LRP3-203ENST00000590278 CCDC66A2RUB6 948 aa16.9■□□□□ 0.3
LRP3-203ENST00000590278 CCP110O43303 1012 aa16.9■□□□□ 0.3
LRP3-203ENST00000590278 CDKL5O76039 1030 aa16.9■□□□□ 0.3
LRP3-203ENST00000590278 BPIFA3Q9BQP9 254 aa16.9■□□□□ 0.3
LRP3-203ENST00000590278 L2HGDHQ9H9P8 463 aa16.9■□□□□ 0.3
LRP3-203ENST00000590278 IFIT3O14879 490 aaKnown RBP16.89■□□□□ 0.29
LRP3-203ENST00000590278 PNMA6AP0CW24 399 aaPredicted RBP16.89■□□□□ 0.29
LRP3-203ENST00000590278 NUP133Q8WUM0 1156 aa16.89■□□□□ 0.29
LRP3-203ENST00000590278 AIDAQ96BJ3 306 aa16.89■□□□□ 0.29
LRP3-203ENST00000590278 C5P01031 1676 aa16.89■□□□□ 0.29
LRP3-203ENST00000590278 CASQ1P31415 396 aa16.89■□□□□ 0.29
LRP3-203ENST00000590278 CTDSPL2Q05D32 466 aa16.89■□□□□ 0.29
LRP3-203ENST00000590278 PDE4BQ07343 736 aa16.89■□□□□ 0.29
LRP3-203ENST00000590278 APOA5Q6Q788 366 aa16.89■□□□□ 0.29
LRP3-203ENST00000590278 BTBD18B2RXH4 712 aa16.88■□□□□ 0.29
LRP3-203ENST00000590278 ZSCAN12O43309 604 aa16.88■□□□□ 0.29
LRP3-203ENST00000590278 MCAMP43121 646 aa16.88■□□□□ 0.29
LRP3-203ENST00000590278 METTL16Q86W50 562 aaKnown RBP16.88■□□□□ 0.29
LRP3-203ENST00000590278 BAG1Q99933 345 aaPredicted RBP16.88■□□□□ 0.29
LRP3-203ENST00000590278 NFE2L3Q9Y4A8 694 aa16.88■□□□□ 0.29
LRP3-203ENST00000590278 SLC12A7Q9Y666 1083 aa16.88■□□□□ 0.29
LRP3-203ENST00000590278 IKBKBO14920 756 aa16.88■□□□□ 0.29
LRP3-203ENST00000590278 POLR2DO15514 142 aaKnown RBP16.88■□□□□ 0.29
LRP3-203ENST00000590278 STRN4Q9NRL3 753 aa16.88■□□□□ 0.29
LRP3-203ENST00000590278 PPP2R2CQ9Y2T4 447 aa16.88■□□□□ 0.29
LRP3-203ENST00000590278 ZMYM6O95789 1325 aa16.88■□□□□ 0.29
LRP3-203ENST00000590278 GRIN1Q05586 938 aa16.88■□□□□ 0.29
LRP3-203ENST00000590278 FOXP4Q8IVH2 680 aaPredicted RBP16.88■□□□□ 0.29
LRP3-203ENST00000590278 HSD3B7Q9H2F3 369 aa16.88■□□□□ 0.29
LRP3-203ENST00000590278 AFDNP55196 1824 aaKnown RBP16.87■□□□□ 0.29
LRP3-203ENST00000590278 H2AFXP16104 143 aaPredicted RBP16.87■□□□□ 0.29
LRP3-203ENST00000590278 STX17P56962 302 aa16.87■□□□□ 0.29
LRP3-203ENST00000590278 SAFBQ15424 915 aaKnown RBP eCLIP16.87■□□□□ 0.29
LRP3-203ENST00000590278 VSTM4Q8IW00 320 aa16.87■□□□□ 0.29
LRP3-203ENST00000590278 ZCCHC17Q9NP64 241 aaKnown RBP16.87■□□□□ 0.29
LRP3-203ENST00000590278 LZTFL1Q9NQ48 299 aa16.87■□□□□ 0.29
LRP3-203ENST00000590278 KIF13AQ9H1H9 1805 aa16.87■□□□□ 0.29
LRP3-203ENST00000590278 KAT6BQ8WYB5 2073 aa16.87■□□□□ 0.29
LRP3-203ENST00000590278 ZNF532Q9HCE3 1301 aa16.87■□□□□ 0.29
LRP3-203ENST00000590278 KRBA2Q6ZNG9 492 aa16.87■□□□□ 0.29
LRP3-203ENST00000590278 WDR24Q96S15 920 aa16.87■□□□□ 0.29
LRP3-203ENST00000590278 FHOD1Q9Y613 1164 aa16.87■□□□□ 0.29
LRP3-203ENST00000590278 LAMA4Q16363 1823 aa16.87■□□□□ 0.29
LRP3-203ENST00000590278 SNAP23O00161 211 aa16.86■□□□□ 0.29
LRP3-203ENST00000590278 CIAO1O76071 339 aa16.86■□□□□ 0.29
LRP3-203ENST00000590278 SSRP1Q08945 709 aaKnown RBP16.86■□□□□ 0.29
LRP3-203ENST00000590278 TOGARAM2Q6ZUX3 1019 aa16.86■□□□□ 0.29
LRP3-203ENST00000590278 ZCRB1Q8TBF4 217 aaKnown RBP16.86■□□□□ 0.29
LRP3-203ENST00000590278 CCDC12Q8WUD4 166 aaPredicted RBP16.86■□□□□ 0.29
LRP3-203ENST00000590278 NAPBQ9H115 298 aa16.86■□□□□ 0.29
LRP3-203ENST00000590278 TBC1D2BQ9UPU7 963 aa16.86■□□□□ 0.29
LRP3-203ENST00000590278 CCDC93Q567U6 631 aa16.86■□□□□ 0.29
LRP3-203ENST00000590278 IRX2Q9BZI1 471 aaPredicted RBP16.86■□□□□ 0.29
LRP3-203ENST00000590278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.86■□□□□ 0.29
LRP3-203ENST00000590278 SERTAD1Q9UHV2 236 aa16.86■□□□□ 0.29
LRP3-203ENST00000590278 PRR29P0C7W0 189 aa16.85■□□□□ 0.29
LRP3-203ENST00000590278 AFMP43652 599 aa16.85■□□□□ 0.29
LRP3-203ENST00000590278 KIF6Q6ZMV9 814 aa16.85■□□□□ 0.29
LRP3-203ENST00000590278 KRI1Q8N9T8 703 aaKnown RBP16.85■□□□□ 0.29
LRP3-203ENST00000590278 NEK11Q8NG66 645 aa16.85■□□□□ 0.29
LRP3-203ENST00000590278 PRDM11Q9NQV5 511 aa16.85■□□□□ 0.29
LRP3-203ENST00000590278 HOOK1Q9UJC3 728 aaKnown RBP16.85■□□□□ 0.29
LRP3-203ENST00000590278 WWC3Q9ULE0 1092 aa16.85■□□□□ 0.29
LRP3-203ENST00000590278 SH2B2O14492 632 aaPredicted RBP16.85■□□□□ 0.29
LRP3-203ENST00000590278 FANCGO15287 622 aa16.85■□□□□ 0.29
LRP3-203ENST00000590278 COBLO75128 1261 aa16.85■□□□□ 0.29
LRP3-203ENST00000590278 ITGA6P23229 1130 aa16.85■□□□□ 0.29
LRP3-203ENST00000590278 GUCY1A2P33402 732 aa16.85■□□□□ 0.29
LRP3-203ENST00000590278 TRIM65Q6PJ69 517 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms