RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 DOCK2Q92608 1830 aa25.89■■□□□ 1.74
ATG4D-212ENST00000590096 ERC2O15083 957 aa25.89■■□□□ 1.74
ATG4D-212ENST00000590096 MX1P20591 662 aa25.89■■□□□ 1.74
ATG4D-212ENST00000590096 ZNF384Q8TF68 577 aa25.89■■□□□ 1.74
ATG4D-212ENST00000590096 NOL10Q9BSC4 688 aaKnown RBP25.89■■□□□ 1.74
ATG4D-212ENST00000590096 LNPKQ9C0E8 428 aa25.89■■□□□ 1.74
ATG4D-212ENST00000590096 TCP10L2B9ZVM9 353 aa25.88■■□□□ 1.73
ATG4D-212ENST00000590096 BTDP43251 543 aa25.88■■□□□ 1.73
ATG4D-212ENST00000590096 HTRA3P83110 453 aa25.88■■□□□ 1.73
ATG4D-212ENST00000590096 TSHZ3Q63HK5 1081 aa25.88■■□□□ 1.73
ATG4D-212ENST00000590096 CDC42EP5Q6NZY7 148 aa25.88■■□□□ 1.73
ATG4D-212ENST00000590096 OTUD7AQ8TE49 926 aaPredicted RBP25.88■■□□□ 1.73
ATG4D-212ENST00000590096 USP40Q9NVE5 1235 aa25.88■■□□□ 1.73
ATG4D-212ENST00000590096 NF2P35240 595 aa25.87■■□□□ 1.73
ATG4D-212ENST00000590096 CACNB3P54284 484 aa25.87■■□□□ 1.73
ATG4D-212ENST00000590096 NUCB1Q02818 461 aa25.87■■□□□ 1.73
ATG4D-212ENST00000590096 PRAMEF18Q5VWM3 479 aa25.87■■□□□ 1.73
ATG4D-212ENST00000590096 CST9Q5W186 159 aa25.87■■□□□ 1.73
ATG4D-212ENST00000590096 CHD1LQ86WJ1 897 aa25.87■■□□□ 1.73
ATG4D-212ENST00000590096 GPR75-ASB3A0A0A6YYF3 556 aa25.86■■□□□ 1.73
ATG4D-212ENST00000590096 RASA3Q14644 834 aa25.86■■□□□ 1.73
ATG4D-212ENST00000590096 FKBP1CQ5VVH2 108 aa25.86■■□□□ 1.73
ATG4D-212ENST00000590096 TMED8Q6PL24 325 aaPredicted RBP25.86■■□□□ 1.73
ATG4D-212ENST00000590096 EDC3Q96F86 508 aaKnown RBP25.86■■□□□ 1.73
ATG4D-212ENST00000590096 ABT1Q9ULW3 272 aaKnown RBP25.86■■□□□ 1.73
ATG4D-212ENST00000590096 GLRX3O76003 335 aaKnown RBP25.85■■□□□ 1.73
ATG4D-212ENST00000590096 MAGEB6Q8N7X4 407 aa25.85■■□□□ 1.73
ATG4D-212ENST00000590096 BAG3O95817 575 aa25.84■■□□□ 1.73
ATG4D-212ENST00000590096 CYP7A1P22680 504 aa25.84■■□□□ 1.73
ATG4D-212ENST00000590096 C2orf69Q8N8R5 385 aa25.84■■□□□ 1.73
ATG4D-212ENST00000590096 KLRG1Q96E93 195 aa25.84■■□□□ 1.73
ATG4D-212ENST00000590096 GBA2Q9HCG7 927 aaPredicted RBP25.84■■□□□ 1.73
ATG4D-212ENST00000590096 SALL3Q9BXA9 1300 aa25.84■■□□□ 1.73
ATG4D-212ENST00000590096 FAM83AQ86UY5 434 aa25.83■■□□□ 1.73
ATG4D-212ENST00000590096 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.83■■□□□ 1.731e-6■■■■■ 36.3
ATG4D-212ENST00000590096 MAP4K4O95819 1239 aaPredicted RBP25.82■■□□□ 1.72
ATG4D-212ENST00000590096 PLCG2P16885 1265 aa25.82■■□□□ 1.72
ATG4D-212ENST00000590096 SUPT20HL1Q3ZLR7 823 aa25.82■■□□□ 1.72
ATG4D-212ENST00000590096 SLC9C2Q5TAH2 1124 aa25.82■■□□□ 1.72
ATG4D-212ENST00000590096 JMYQ8N9B5 988 aa25.82■■□□□ 1.72
ATG4D-212ENST00000590096 PI4K2BQ8TCG2 481 aa25.82■■□□□ 1.72
ATG4D-212ENST00000590096 AATFQ9NY61 560 aaKnown RBP eCLIP25.82■■□□□ 1.72
ATG4D-212ENST00000590096 PDE1AP54750 535 aa25.81■■□□□ 1.72
ATG4D-212ENST00000590096 ADGRA1Q86SQ6 560 aa25.81■■□□□ 1.72
ATG4D-212ENST00000590096 TMEM39BQ9GZU3 492 aa25.81■■□□□ 1.72
ATG4D-212ENST00000590096 STAP2Q9UGK3 403 aa25.81■■□□□ 1.72
ATG4D-212ENST00000590096 TLL2Q9Y6L7 1015 aa25.81■■□□□ 1.72
ATG4D-212ENST00000590096 CNTNAP1P78357 1384 aa25.81■■□□□ 1.72
ATG4D-212ENST00000590096 PDE6AP16499 860 aa25.8■■□□□ 1.72
ATG4D-212ENST00000590096 RHBDL3P58872 404 aa25.8■■□□□ 1.72
ATG4D-212ENST00000590096 FKBP1BP68106 108 aa25.8■■□□□ 1.72
ATG4D-212ENST00000590096 NFIAQ12857 509 aa25.8■■□□□ 1.72
ATG4D-212ENST00000590096 TTLL12Q14166 644 aaPredicted RBP25.8■■□□□ 1.72
ATG4D-212ENST00000590096 IDI2Q9BXS1 227 aa25.8■■□□□ 1.72
ATG4D-212ENST00000590096 PAPPA2Q9BXP8 1791 aa25.79■■□□□ 1.72
ATG4D-212ENST00000590096 MYH7P12883 1935 aa25.79■■□□□ 1.72
ATG4D-212ENST00000590096 PPP4CP60510 307 aa25.79■■□□□ 1.72
ATG4D-212ENST00000590096 TCP10Q12799 353 aa25.79■■□□□ 1.72
ATG4D-212ENST00000590096 NBPF12Q5TAG4 269 aaPredicted RBP25.79■■□□□ 1.72
ATG4D-212ENST00000590096 ZSCAN25Q6NSZ9 544 aa25.79■■□□□ 1.72
ATG4D-212ENST00000590096 CERS3Q8IU89 383 aa25.79■■□□□ 1.72
ATG4D-212ENST00000590096 TEX11Q8IYF3 940 aa25.79■■□□□ 1.72
ATG4D-212ENST00000590096 FAM151AQ8WW52 585 aa25.79■■□□□ 1.72
ATG4D-212ENST00000590096 RGS3P49796 1198 aa25.78■■□□□ 1.72
ATG4D-212ENST00000590096 HUNKP57058 714 aa25.78■■□□□ 1.72
ATG4D-212ENST00000590096 PICALMQ13492 652 aa25.78■■□□□ 1.72
ATG4D-212ENST00000590096 SAPCD2Q86UD0 394 aa25.78■■□□□ 1.72
ATG4D-212ENST00000590096 TEPSINQ96N21 525 aa25.78■■□□□ 1.72
ATG4D-212ENST00000590096 FAM198AQ9UFP1 575 aa25.78■■□□□ 1.72
ATG4D-212ENST00000590096 ZNF532Q9HCE3 1301 aa25.78■■□□□ 1.72
ATG4D-212ENST00000590096 RPAP1Q9BWH6 1393 aaPredicted RBP25.78■■□□□ 1.72
ATG4D-212ENST00000590096 PPP1R12BO60237 982 aaPredicted RBP25.77■■□□□ 1.72
ATG4D-212ENST00000590096 ENTPD3O75355 529 aa25.77■■□□□ 1.72
ATG4D-212ENST00000590096 WDHD1O75717 1129 aaPredicted RBP25.77■■□□□ 1.72
ATG4D-212ENST00000590096 PRKG1Q13976 671 aa25.77■■□□□ 1.72
ATG4D-212ENST00000590096 ARMC9Q7Z3E5 817 aa25.77■■□□□ 1.72
ATG4D-212ENST00000590096 KBTBD3Q8NAB2 608 aa25.77■■□□□ 1.72
ATG4D-212ENST00000590096 MIGA1Q8NAN2 632 aa25.77■■□□□ 1.72
ATG4D-212ENST00000590096 SH3RF3Q8TEJ3 882 aaPredicted RBP25.77■■□□□ 1.72
ATG4D-212ENST00000590096 RFX7Q2KHR2 1363 aa25.77■■□□□ 1.72
ATG4D-212ENST00000590096 AK9Q5TCS8 1911 aa25.76■■□□□ 1.72
ATG4D-212ENST00000590096 RASSF10A6NK89 507 aa25.76■■□□□ 1.71
ATG4D-212ENST00000590096 ADD2P35612 726 aa25.76■■□□□ 1.71
ATG4D-212ENST00000590096 DEFB115Q30KQ5 88 aa25.76■■□□□ 1.71
ATG4D-212ENST00000590096 PAXIP1Q6ZW49 1069 aaPredicted RBP25.76■■□□□ 1.71
ATG4D-212ENST00000590096 HOOK2Q96ED9 719 aa25.76■■□□□ 1.71
ATG4D-212ENST00000590096 MKRN1Q9UHC7 482 aaKnown RBP25.76■■□□□ 1.71
ATG4D-212ENST00000590096 SSC5DA1L4H1 1573 aa25.75■■□□□ 1.71
ATG4D-212ENST00000590096 DYNLL1P63167 89 aaKnown RBP25.75■■□□□ 1.71
ATG4D-212ENST00000590096 LRRFIP1Q32MZ4 808 aaKnown RBP25.75■■□□□ 1.71
ATG4D-212ENST00000590096 PLEKHM2Q8IWE5 1019 aa25.75■■□□□ 1.71
ATG4D-212ENST00000590096 CDAN1Q8IWY9 1227 aa25.75■■□□□ 1.71
ATG4D-212ENST00000590096 MAGEB6P1A0A0J9YX57 407 aa25.74■■□□□ 1.71
ATG4D-212ENST00000590096 TCRBV5S4A2TA0A5A2 114 aa25.74■■□□□ 1.71
ATG4D-212ENST00000590096 NPM3O75607 178 aaKnown RBP25.74■■□□□ 1.71
ATG4D-212ENST00000590096 UBE3CQ15386 1083 aa25.74■■□□□ 1.71
ATG4D-212ENST00000590096 ZSCAN29Q8IWY8 852 aaPredicted RBP25.74■■□□□ 1.71
ATG4D-212ENST00000590096 CCDC136Q96JN2 1154 aa25.74■■□□□ 1.71
ATG4D-212ENST00000590096 DDX4Q9NQI0 724 aaKnown RBP25.74■■□□□ 1.71
ATG4D-212ENST00000590096 ANGEL1Q9UNK9 670 aaKnown RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms