RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 WNK4Q96J92 1243 aa10.29□□□□□ -0.76
TPM4-211ENST00000589897 PRO3102Q9H379 93 aa10.29□□□□□ -0.76
TPM4-211ENST00000589897 ZFYVE28Q9HCC9 887 aa10.29□□□□□ -0.76
TPM4-211ENST00000589897 AKAP2Q9Y2D5 859 aa10.29□□□□□ -0.76
TPM4-211ENST00000589897 KIAA0100Q14667 2235 aaKnown RBP10.28□□□□□ -0.76
TPM4-211ENST00000589897 TESPA1A2RU30 521 aaPredicted RBP10.28□□□□□ -0.76
TPM4-211ENST00000589897 PRMT2P55345 433 aa10.28□□□□□ -0.76
TPM4-211ENST00000589897 G3BP1Q13283 466 aaKnown RBP eCLIP10.28□□□□□ -0.76
TPM4-211ENST00000589897 GORABQ5T7V8 394 aa10.28□□□□□ -0.76
TPM4-211ENST00000589897 COPRSQ9NQ92 184 aa10.28□□□□□ -0.76
TPM4-211ENST00000589897 DENND2AQ9ULE3 1009 aa10.28□□□□□ -0.76
TPM4-211ENST00000589897 FZD1Q9UP38 647 aa10.28□□□□□ -0.76
TPM4-211ENST00000589897 PTCH2Q9Y6C5 1203 aa10.28□□□□□ -0.76
TPM4-211ENST00000589897 SEMA3EO15041 775 aa10.27□□□□□ -0.77
TPM4-211ENST00000589897 LDHBP07195 334 aaKnown RBP10.27□□□□□ -0.77
TPM4-211ENST00000589897 CAPN2P17655 700 aa10.27□□□□□ -0.77
TPM4-211ENST00000589897 OS9Q13438 667 aaPredicted RBP10.27□□□□□ -0.77
TPM4-211ENST00000589897 GRIK5Q16478 980 aa10.27□□□□□ -0.77
TPM4-211ENST00000589897 ANKRD13AQ8IZ07 590 aa10.27□□□□□ -0.77
TPM4-211ENST00000589897 ZGPATQ8N5A5 531 aaKnown RBP10.27□□□□□ -0.77
TPM4-211ENST00000589897 HOOK2Q96ED9 719 aa10.27□□□□□ -0.77
TPM4-211ENST00000589897 ZDHHC15Q96MV8 337 aa10.27□□□□□ -0.77
TPM4-211ENST00000589897 NEUROD6Q96NK8 337 aa10.27□□□□□ -0.77
TPM4-211ENST00000589897 MRIQ9BWK5 157 aa10.27□□□□□ -0.77
TPM4-211ENST00000589897 STXBP5LQ9Y2K9 1186 aa10.27□□□□□ -0.77
TPM4-211ENST00000589897 AK9Q5TCS8 1911 aa10.27□□□□□ -0.77
TPM4-211ENST00000589897 MYCP01106 439 aaPredicted RBP10.26□□□□□ -0.77
TPM4-211ENST00000589897 HOXD10P28358 340 aa10.26□□□□□ -0.77
TPM4-211ENST00000589897 TIMM10P62072 90 aa10.26□□□□□ -0.77
TPM4-211ENST00000589897 TFCP2Q12800 502 aa10.26□□□□□ -0.77
TPM4-211ENST00000589897 MVPQ14764 893 aaKnown RBP10.26□□□□□ -0.77
TPM4-211ENST00000589897 HHIPL2Q6UWX4 724 aa10.26□□□□□ -0.77
TPM4-211ENST00000589897 ITPRIPQ8IWB1 547 aa10.26□□□□□ -0.77
TPM4-211ENST00000589897 TMEM57Q8N5G2 664 aa10.26□□□□□ -0.77
TPM4-211ENST00000589897 TMEM39BQ9GZU3 492 aa10.26□□□□□ -0.77
TPM4-211ENST00000589897 TNNQ9UQP3 1299 aa10.26□□□□□ -0.77
TPM4-211ENST00000589897 AOX1Q06278 1338 aa10.26□□□□□ -0.77
TPM4-211ENST00000589897 ZBED9Q6R2W3 1325 aa10.26□□□□□ -0.77
TPM4-211ENST00000589897 A0A1B0GUL7 405 aa10.25□□□□□ -0.77
TPM4-211ENST00000589897 USP2O75604 605 aaPredicted RBP10.25□□□□□ -0.77
TPM4-211ENST00000589897 PHKA1P46020 1223 aa10.25□□□□□ -0.77
TPM4-211ENST00000589897 CACNB3P54284 484 aa10.25□□□□□ -0.77
TPM4-211ENST00000589897 MTX1Q13505 466 aa10.25□□□□□ -0.77
TPM4-211ENST00000589897 SPTY2D1Q68D10 685 aaPredicted RBP10.25□□□□□ -0.77
TPM4-211ENST00000589897 CCDC102BQ68D86 513 aa10.25□□□□□ -0.77
TPM4-211ENST00000589897 DZIP1Q86YF9 867 aaKnown RBP10.25□□□□□ -0.77
TPM4-211ENST00000589897 SLF2Q8IX21 1173 aa10.25□□□□□ -0.77
TPM4-211ENST00000589897 CLMNQ96JQ2 1002 aa10.25□□□□□ -0.77
TPM4-211ENST00000589897 PTPN18Q99952 460 aa10.25□□□□□ -0.77
TPM4-211ENST00000589897 COL25A1Q9BXS0 654 aaPredicted RBP10.25□□□□□ -0.77
TPM4-211ENST00000589897 ABCF2Q9UG63 623 aa10.25□□□□□ -0.77
TPM4-211ENST00000589897 CSADQ9Y600 493 aa10.25□□□□□ -0.77
TPM4-211ENST00000589897 ZBTB7BO15156 539 aaPredicted RBP10.24□□□□□ -0.77
TPM4-211ENST00000589897 EVI5O60447 810 aa10.24□□□□□ -0.77
TPM4-211ENST00000589897 GJB1P08034 283 aa10.24□□□□□ -0.77
TPM4-211ENST00000589897 MS4A1P11836 297 aa10.24□□□□□ -0.77
TPM4-211ENST00000589897 PRDX5P30044 214 aa10.24□□□□□ -0.77
TPM4-211ENST00000589897 ADORA1P30542 326 aa10.24□□□□□ -0.77
TPM4-211ENST00000589897 GJA8P48165 433 aa10.24□□□□□ -0.77
TPM4-211ENST00000589897 MAP3K9P80192 1104 aa10.24□□□□□ -0.77
TPM4-211ENST00000589897 TAF1CQ15572 869 aaPredicted RBP10.24□□□□□ -0.77
TPM4-211ENST00000589897 FKBP1CQ5VVH2 108 aa10.24□□□□□ -0.77
TPM4-211ENST00000589897 DCAF15Q66K64 600 aa10.24□□□□□ -0.77
TPM4-211ENST00000589897 FAM83AQ86UY5 434 aa10.24□□□□□ -0.77
TPM4-211ENST00000589897 DEFB123Q8N688 67 aa10.24□□□□□ -0.77
TPM4-211ENST00000589897 SH3TC2Q8TF17 1288 aa10.24□□□□□ -0.77
TPM4-211ENST00000589897 XAGE2Q96GT9 111 aa10.24□□□□□ -0.77
TPM4-211ENST00000589897 ELP3Q9H9T3 547 aa10.24□□□□□ -0.77
TPM4-211ENST00000589897 SSC5DA1L4H1 1573 aa10.23□□□□□ -0.77
TPM4-211ENST00000589897 PNMA6EA0A0J9YXQ4 647 aa10.23□□□□□ -0.77
TPM4-211ENST00000589897 GTF2A2P52657 109 aa10.23□□□□□ -0.77
TPM4-211ENST00000589897 TCP10Q12799 353 aa10.23□□□□□ -0.77
TPM4-211ENST00000589897 DIXDC1Q155Q3 683 aa10.23□□□□□ -0.77
TPM4-211ENST00000589897 APOBEC3HQ6NTF7 200 aaKnown RBP10.23□□□□□ -0.77
TPM4-211ENST00000589897 OPTNQ96CV9 577 aa10.23□□□□□ -0.77
TPM4-211ENST00000589897 LRCH3Q96II8 777 aa10.23□□□□□ -0.77
TPM4-211ENST00000589897 USP40Q9NVE5 1235 aa10.23□□□□□ -0.77
TPM4-211ENST00000589897 DAGLAQ9Y4D2 1042 aa10.23□□□□□ -0.77
TPM4-211ENST00000589897 SALL1Q9NSC2 1324 aa10.23□□□□□ -0.77
TPM4-211ENST00000589897 TRIOBPQ9H2D6 2365 aa10.23□□□□□ -0.77
TPM4-211ENST00000589897 SOX1O00570 391 aaPredicted RBP10.22□□□□□ -0.77
TPM4-211ENST00000589897 SURF6O75683 361 aaKnown RBP10.22□□□□□ -0.77
TPM4-211ENST00000589897 BMP8BP34820 402 aa10.22□□□□□ -0.77
TPM4-211ENST00000589897 RASGRF1Q13972 1273 aa10.22□□□□□ -0.77
TPM4-211ENST00000589897 ERICH6Q7L0X2 663 aa10.22□□□□□ -0.77
TPM4-211ENST00000589897 MS4A4AQ96JQ5 239 aa10.22□□□□□ -0.77
TPM4-211ENST00000589897 TRIM47Q96LD4 638 aa10.22□□□□□ -0.77
TPM4-211ENST00000589897 TEPSINQ96N21 525 aa10.22□□□□□ -0.77
TPM4-211ENST00000589897 WRNIP1Q96S55 665 aa10.22□□□□□ -0.77
TPM4-211ENST00000589897 C1orf115Q9H7X2 142 aa10.22□□□□□ -0.77
TPM4-211ENST00000589897 MYH2Q9UKX2 1941 aa10.22□□□□□ -0.77
TPM4-211ENST00000589897 TLR2O60603 784 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 UQCRFS1P1P0C7P4 283 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 UBXN2AP68543 259 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 GSTO1P78417 241 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 LACTBP83111 547 aaPredicted RBP10.21□□□□□ -0.77
TPM4-211ENST00000589897 ATP8B2P98198 1209 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 CAP1Q01518 475 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 VGLL4Q14135 290 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 CCDC158Q5M9N0 1113 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms