RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 TTC21AQ8NDW8 1320 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 KDM3BQ7LBC6 1761 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 FAM177BA6PVY3 158 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 NBPF26B4DH59 902 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 SGSM2O43147 1006 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 CREB3O43889 395 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 RGS20O76081 388 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 TPM1P09493 284 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 SLFN14P0C7P3 912 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 ZKSCAN1P17029 563 aaPredicted RBP3.91□□□□□ -1.78
LINC01539-203ENST00000589447 CASTP20810 708 aaKnown RBP3.91□□□□□ -1.78
LINC01539-203ENST00000589447 COL9A1P20849 921 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 PSMA5P28066 241 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 RXRBP28702 533 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 GTF2E1P29083 439 aaPredicted RBP3.91□□□□□ -1.78
LINC01539-203ENST00000589447 TAGLNQ01995 201 aaKnown RBP3.91□□□□□ -1.78
LINC01539-203ENST00000589447 DNM1Q05193 864 aaKnown RBP3.91□□□□□ -1.78
LINC01539-203ENST00000589447 GPS2Q13227 327 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 TCEAL1Q15170 157 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 STX1AQ16623 288 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 SWI5Q1ZZU3 235 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 LONRF3Q496Y0 759 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 ANO6Q4KMQ2 910 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 EAPPQ56P03 285 aaPredicted RBP3.91□□□□□ -1.78
LINC01539-203ENST00000589447 ZNF772Q68DY9 489 aaPredicted RBP3.91□□□□□ -1.78
LINC01539-203ENST00000589447 SLC4A10Q6U841 1118 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 RBM43Q6ZSC3 357 aaKnown RBP3.91□□□□□ -1.78
LINC01539-203ENST00000589447 WAPLQ7Z5K2 1190 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 METTL16Q86W50 562 aaKnown RBP3.91□□□□□ -1.78
LINC01539-203ENST00000589447 NT5DC4Q86YG4 428 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 CCDC83Q8IWF9 413 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 TXLNBQ8N3L3 684 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 MPNDQ8N594 471 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 BICD2Q8TD16 824 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 CABLES1Q8TDN4 633 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 PXYLP1Q8TE99 480 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 JARID2Q92833 1246 aaPredicted RBP3.91□□□□□ -1.78
LINC01539-203ENST00000589447 KIF1BPQ96EK5 621 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 TTC14Q96N46 770 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 NOL10Q9BSC4 688 aaKnown RBP3.91□□□□□ -1.78
LINC01539-203ENST00000589447 TRIM34Q9BYJ4 488 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 KCND1Q9NSA2 647 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 PDRG1Q9NUG6 133 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 DCTN4Q9UJW0 460 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 HDAC5Q9UQL6 1122 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 MTMR6Q9Y217 621 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 EMILIN1Q9Y6C2 1016 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 LAMA4Q16363 1823 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 TAF1LQ8IZX4 1826 aa3.91□□□□□ -1.78
LINC01539-203ENST00000589447 SLIT3O75094 1523 aa3.9□□□□□ -1.78
LINC01539-203ENST00000589447 NFAT5O94916 1531 aa3.9□□□□□ -1.78
LINC01539-203ENST00000589447 LY75O60449 1722 aa3.9□□□□□ -1.78
LINC01539-203ENST00000589447 ANKARQ7Z5J8 1434 aa3.9□□□□□ -1.78
LINC01539-203ENST00000589447 FAM83GA6ND36 823 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 SOWAHBA6NEL2 793 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 BECN2A8MW95 431 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 ATP8B1O43520 1251 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 GIGYF1O75420 1035 aaPredicted RBP3.9□□□□□ -1.79
LINC01539-203ENST00000589447 GLRX3O76003 335 aaKnown RBP3.9□□□□□ -1.79
LINC01539-203ENST00000589447 ITGBL1O95965 494 aaPredicted RBP3.9□□□□□ -1.79
LINC01539-203ENST00000589447 UBTFL1P0CB47 393 aaPredicted RBP3.9□□□□□ -1.79
LINC01539-203ENST00000589447 ATP2B4P23634 1241 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 KCNJ4P48050 445 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 KCNJ6P48051 423 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 ZNF165P49910 485 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 RBM6P78332 1123 aaKnown RBP3.9□□□□□ -1.79
LINC01539-203ENST00000589447 QPCTQ16769 361 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 PROX2Q3B8N5 592 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 LDLRAD1Q5T700 205 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 CCDC30Q5VVM6 783 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 LARP1BQ659C4 914 aaKnown RBP3.9□□□□□ -1.79
LINC01539-203ENST00000589447 RUFY3Q7L099 469 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 FILIP1Q7Z7B0 1213 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 LUZP1Q86V48 1076 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 PACS2Q86VP3 889 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 TMTC2Q8N394 836 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 GPATCH11Q8N954 259 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 CCDC150Q8NCX0 1101 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 PNMA1Q8ND90 353 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 DHX38Q92620 1227 aaKnown RBP3.9□□□□□ -1.79
LINC01539-203ENST00000589447 SGSM3Q96HU1 749 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 JAKMIP1Q96N16 626 aaKnown RBP3.9□□□□□ -1.79
LINC01539-203ENST00000589447 SRRTQ9BXP5 876 aaKnown RBP3.9□□□□□ -1.79
LINC01539-203ENST00000589447 MAF1Q9H063 256 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 LSG1Q9H089 658 aaKnown RBP3.9□□□□□ -1.79
LINC01539-203ENST00000589447 NAT10Q9H0A0 1025 aaKnown RBP3.9□□□□□ -1.79
LINC01539-203ENST00000589447 IRF2BPLQ9H1B7 796 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 QTRT2Q9H974 415 aaKnown RBP3.9□□□□□ -1.79
LINC01539-203ENST00000589447 CBX8Q9HC52 389 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 TMEM51Q9NW97 253 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 BABAM1Q9NWV8 329 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 HYPKQ9NX55 129 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 CWC15Q9P013 229 aaKnown RBP3.9□□□□□ -1.79
LINC01539-203ENST00000589447 IMPACTQ9P2X3 320 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 TSPYL4Q9UJ04 414 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 CFAP45Q9UL16 551 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 SPATA31A3Q5VYP0 1347 aa3.9□□□□□ -1.79
LINC01539-203ENST00000589447 USP42Q9H9J4 1324 aaKnown RBP3.9□□□□□ -1.79
LINC01539-203ENST00000589447 OVOS2A0A0J9YW53 1432 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 OVOS2Q6IE36 1432 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms