RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 OSBP2Q969R2 916 aa14.65□□□□□ -0.06
DNMT1-218ENST00000589294 USP40Q9NVE5 1235 aa14.65□□□□□ -0.06
DNMT1-218ENST00000589294 PGAP2Q9UHJ9 254 aa14.65□□□□□ -0.06
DNMT1-218ENST00000589294 SCN4AP35499 1836 aa14.64□□□□□ -0.07
DNMT1-218ENST00000589294 EGFRP00533 1210 aa14.64□□□□□ -0.07
DNMT1-218ENST00000589294 CHGBP05060 677 aa14.64□□□□□ -0.07
DNMT1-218ENST00000589294 SLFNL1Q499Z3 407 aa14.64□□□□□ -0.07
DNMT1-218ENST00000589294 FKBP1CQ5VVH2 108 aa14.64□□□□□ -0.07
DNMT1-218ENST00000589294 CDC42EP5Q6NZY7 148 aa14.64□□□□□ -0.07
DNMT1-218ENST00000589294 CASC1Q6TDU7 716 aa14.64□□□□□ -0.07
DNMT1-218ENST00000589294 TRPM4Q8TD43 1214 aa14.64□□□□□ -0.07
DNMT1-218ENST00000589294 ZNF526Q8TF50 670 aaPredicted RBP14.64□□□□□ -0.07
DNMT1-218ENST00000589294 AIDAQ96BJ3 306 aa14.64□□□□□ -0.07
DNMT1-218ENST00000589294 RIOK1Q9BRS2 568 aaKnown RBP14.64□□□□□ -0.07
DNMT1-218ENST00000589294 PUS7LQ9H0K6 701 aaKnown RBP14.64□□□□□ -0.07
DNMT1-218ENST00000589294 GPBP1L1Q9HC44 474 aaPredicted RBP14.64□□□□□ -0.07
DNMT1-218ENST00000589294 AATFQ9NY61 560 aaKnown RBP eCLIP14.64□□□□□ -0.07
DNMT1-218ENST00000589294 PCDHAC2Q9Y5I4 1007 aa14.64□□□□□ -0.07
DNMT1-218ENST00000589294 MYO5AQ9Y4I1 1855 aaKnown RBP14.63□□□□□ -0.07
DNMT1-218ENST00000589294 CDC45O75419 566 aa14.63□□□□□ -0.07
DNMT1-218ENST00000589294 NPM3O75607 178 aaKnown RBP14.63□□□□□ -0.07
DNMT1-218ENST00000589294 MFAP1P55081 439 aaKnown RBP14.63□□□□□ -0.07
DNMT1-218ENST00000589294 RHBDL3P58872 404 aa14.63□□□□□ -0.07
DNMT1-218ENST00000589294 NMIQ13287 307 aaPredicted RBP14.63□□□□□ -0.07
DNMT1-218ENST00000589294 SPDYE2Q495Y8 402 aa14.63□□□□□ -0.07
DNMT1-218ENST00000589294 MIGA1Q8NAN2 632 aa14.63□□□□□ -0.07
DNMT1-218ENST00000589294 FAM227BQ96M60 508 aa14.63□□□□□ -0.07
DNMT1-218ENST00000589294 STRBPQ96SI9 672 aaKnown RBP14.63□□□□□ -0.07
DNMT1-218ENST00000589294 TDRD3Q9H7E2 651 aaKnown RBP14.63□□□□□ -0.07
DNMT1-218ENST00000589294 NMRK2Q9NPI5 230 aa14.63□□□□□ -0.07
DNMT1-218ENST00000589294 ZNF70Q9UC06 446 aaPredicted RBP14.63□□□□□ -0.07
DNMT1-218ENST00000589294 MYH2Q9UKX2 1941 aa14.62□□□□□ -0.07
DNMT1-218ENST00000589294 GNAT2P19087 354 aa14.62□□□□□ -0.07
DNMT1-218ENST00000589294 DYNLL1P63167 89 aaKnown RBP14.62□□□□□ -0.07
DNMT1-218ENST00000589294 CWC27Q6UX04 472 aaKnown RBP14.62□□□□□ -0.07
DNMT1-218ENST00000589294 IDI2Q9BXS1 227 aa14.62□□□□□ -0.07
DNMT1-218ENST00000589294 CRNKL1Q9BZJ0 848 aaKnown RBP14.62□□□□□ -0.07
DNMT1-218ENST00000589294 TMOD2Q9NZR1 351 aa14.62□□□□□ -0.07
DNMT1-218ENST00000589294 PITPNM2Q9BZ72 1349 aa14.62□□□□□ -0.07
DNMT1-218ENST00000589294 A0A0D9SFI3 127 aa14.61□□□□□ -0.07
DNMT1-218ENST00000589294 GPAA1O43292 621 aa14.61□□□□□ -0.07
DNMT1-218ENST00000589294 MBD4O95243 580 aa14.61□□□□□ -0.07
DNMT1-218ENST00000589294 EAPPQ56P03 285 aaPredicted RBP14.61□□□□□ -0.07
DNMT1-218ENST00000589294 TEX11Q8IYF3 940 aa14.61□□□□□ -0.07
DNMT1-218ENST00000589294 SH3RF3Q8TEJ3 882 aaPredicted RBP14.61□□□□□ -0.07
DNMT1-218ENST00000589294 SEC62Q99442 399 aaKnown RBP14.61□□□□□ -0.07
DNMT1-218ENST00000589294 ARMT1Q9H993 441 aa14.61□□□□□ -0.07
DNMT1-218ENST00000589294 RPAP1Q9BWH6 1393 aaPredicted RBP14.6□□□□□ -0.07
DNMT1-218ENST00000589294 MAST2Q6P0Q8 1798 aa14.6□□□□□ -0.07
DNMT1-218ENST00000589294 PATL2C9JE40 543 aaKnown RBP14.6□□□□□ -0.07
DNMT1-218ENST00000589294 M0R2C6 588 aa14.6□□□□□ -0.07
DNMT1-218ENST00000589294 WDHD1O75717 1129 aaPredicted RBP14.6□□□□□ -0.07
DNMT1-218ENST00000589294 TNNI2P48788 182 aa14.6□□□□□ -0.07
DNMT1-218ENST00000589294 TNFAIP1Q13829 316 aa14.6□□□□□ -0.07
DNMT1-218ENST00000589294 ANGEL2Q5VTE6 544 aaKnown RBP14.6□□□□□ -0.07
DNMT1-218ENST00000589294 GIMAP6Q6P9H5 292 aa14.6□□□□□ -0.07
DNMT1-218ENST00000589294 FAM83AQ86UY5 434 aa14.6□□□□□ -0.07
DNMT1-218ENST00000589294 LDHDQ86WU2 507 aa14.6□□□□□ -0.07
DNMT1-218ENST00000589294 APOBEC3FQ8IUX4 373 aaKnown RBP14.6□□□□□ -0.07
DNMT1-218ENST00000589294 LCORLQ8N3X6 602 aa14.6□□□□□ -0.07
DNMT1-218ENST00000589294 DCPSQ96C86 337 aaKnown RBP14.6□□□□□ -0.07
DNMT1-218ENST00000589294 ATP8A2Q9NTI2 1148 aa14.6□□□□□ -0.07
DNMT1-218ENST00000589294 CLEC11AQ9Y240 323 aa14.6□□□□□ -0.07
DNMT1-218ENST00000589294 RAD50Q92878 1312 aa14.6□□□□□ -0.07
DNMT1-218ENST00000589294 MYH7P12883 1935 aa14.59□□□□□ -0.07
DNMT1-218ENST00000589294 CLRN2A0PK11 232 aa14.59□□□□□ -0.07
DNMT1-218ENST00000589294 SGSM2O43147 1006 aa14.59□□□□□ -0.07
DNMT1-218ENST00000589294 EIF5BO60841 1220 aaKnown RBP14.59□□□□□ -0.07
DNMT1-218ENST00000589294 ENTPD3O75355 529 aa14.59□□□□□ -0.07
DNMT1-218ENST00000589294 ZNF784Q8NCA9 323 aaPredicted RBP14.59□□□□□ -0.07
DNMT1-218ENST00000589294 FAM151AQ8WW52 585 aa14.59□□□□□ -0.07
DNMT1-218ENST00000589294 ESYT1Q9BSJ8 1104 aa14.59□□□□□ -0.07
DNMT1-218ENST00000589294 SLC4A4Q9Y6R1 1079 aa14.59□□□□□ -0.07
DNMT1-218ENST00000589294 CCDC171Q6TFL3 1326 aa14.59□□□□□ -0.07
DNMT1-218ENST00000589294 AK9Q5TCS8 1911 aa14.58□□□□□ -0.07
DNMT1-218ENST00000589294 USP5P45974 858 aa14.58□□□□□ -0.08
DNMT1-218ENST00000589294 TGFBRAP1Q8WUH2 860 aa14.58□□□□□ -0.08
DNMT1-218ENST00000589294 DDRGK1Q96HY6 314 aa14.58□□□□□ -0.08
DNMT1-218ENST00000589294 NACAP1Q9BZK3 213 aa14.58□□□□□ -0.08
DNMT1-218ENST00000589294 VEZTQ9HBM0 779 aa14.58□□□□□ -0.08
DNMT1-218ENST00000589294 GGA3Q9NZ52 723 aa14.58□□□□□ -0.08
DNMT1-218ENST00000589294 FAM198AQ9UFP1 575 aa14.58□□□□□ -0.08
DNMT1-218ENST00000589294 PPP2R3BQ9Y5P8 575 aa14.58□□□□□ -0.08
DNMT1-218ENST00000589294 ASTN2O75129 1339 aaPredicted RBP14.58□□□□□ -0.08
DNMT1-218ENST00000589294 GSG1L2A8MUP6 293 aa14.57□□□□□ -0.08
DNMT1-218ENST00000589294 TCP10L2B9ZVM9 353 aa14.57□□□□□ -0.08
DNMT1-218ENST00000589294 KIF3CO14782 793 aa14.57□□□□□ -0.08
DNMT1-218ENST00000589294 CACNB3P54284 484 aa14.57□□□□□ -0.08
DNMT1-218ENST00000589294 NFIAQ12857 509 aa14.57□□□□□ -0.08
DNMT1-218ENST00000589294 ALX1Q15699 326 aa14.57□□□□□ -0.08
DNMT1-218ENST00000589294 CCDC129Q6ZRS4 1044 aa14.57□□□□□ -0.08
DNMT1-218ENST00000589294 KIAA1211Q6ZU35 1233 aa14.57□□□□□ -0.08
DNMT1-218ENST00000589294 CDC37L1Q7L3B6 337 aa14.57□□□□□ -0.08
DNMT1-218ENST00000589294 SULF1Q8IWU6 871 aa14.57□□□□□ -0.08
DNMT1-218ENST00000589294 DEFB129Q9H1M3 183 aa14.57□□□□□ -0.08
DNMT1-218ENST00000589294 MKRN1Q9UHC7 482 aaKnown RBP14.57□□□□□ -0.08
DNMT1-218ENST00000589294 PRKAB2O43741 272 aa14.56□□□□□ -0.08
DNMT1-218ENST00000589294 APPP05067 770 aa14.56□□□□□ -0.08
DNMT1-218ENST00000589294 HSPD1P10809 573 aaKnown RBP14.56□□□□□ -0.08
DNMT1-218ENST00000589294 RASA3Q14644 834 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms