RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 MPHOSPH8Q99549 860 aa11.73□□□□□ -0.53
VPS25-202ENST00000589219 RBM27Q9P2N5 1060 aaKnown RBP11.73□□□□□ -0.53
VPS25-202ENST00000589219 CNPY2Q9Y2B0 182 aa11.73□□□□□ -0.53
VPS25-202ENST00000589219 AKAP11Q9UKA4 1901 aa11.72□□□□□ -0.53
VPS25-202ENST00000589219 FAM177BA6PVY3 158 aa11.72□□□□□ -0.53
VPS25-202ENST00000589219 FIBPO43427 364 aa11.72□□□□□ -0.53
VPS25-202ENST00000589219 IFFO2Q5TF58 517 aa11.72□□□□□ -0.53
VPS25-202ENST00000589219 CDC37L1Q7L3B6 337 aa11.72□□□□□ -0.53
VPS25-202ENST00000589219 RTKN2Q8IZC4 609 aa11.72□□□□□ -0.53
VPS25-202ENST00000589219 ZNF274Q96GC6 653 aaPredicted RBP11.72□□□□□ -0.53
VPS25-202ENST00000589219 CHAMP1Q96JM3 812 aa11.72□□□□□ -0.53
VPS25-202ENST00000589219 HCLS1P14317 486 aaPredicted RBP11.71□□□□□ -0.53
VPS25-202ENST00000589219 PHKA1P46020 1223 aa11.71□□□□□ -0.53
VPS25-202ENST00000589219 EVCP57679 992 aa11.71□□□□□ -0.53
VPS25-202ENST00000589219 COL9A3Q14050 684 aaPredicted RBP11.71□□□□□ -0.53
VPS25-202ENST00000589219 NAA16Q6N069 864 aaPredicted RBP11.71□□□□□ -0.53
VPS25-202ENST00000589219 FAM184AQ8NB25 1140 aa11.71□□□□□ -0.53
VPS25-202ENST00000589219 C7orf43Q8WVR3 580 aa11.71□□□□□ -0.53
VPS25-202ENST00000589219 KLRG1Q96E93 195 aa11.71□□□□□ -0.53
VPS25-202ENST00000589219 PPP1R9BQ96SB3 815 aa11.71□□□□□ -0.53
VPS25-202ENST00000589219 TSPY26PQ9H489 355 aa11.71□□□□□ -0.53
VPS25-202ENST00000589219 A0A1B0GUL6 1792 aa11.71□□□□□ -0.54
VPS25-202ENST00000589219 SYCE3A1L190 88 aa11.7□□□□□ -0.54
VPS25-202ENST00000589219 FOXP2O15409 715 aa11.7□□□□□ -0.54
VPS25-202ENST00000589219 GADD45BO75293 160 aaPredicted RBP11.7□□□□□ -0.54
VPS25-202ENST00000589219 PDE6AP16499 860 aa11.7□□□□□ -0.54
VPS25-202ENST00000589219 MCM5P33992 734 aa11.7□□□□□ -0.54
VPS25-202ENST00000589219 DNM1Q05193 864 aaKnown RBP11.7□□□□□ -0.54
VPS25-202ENST00000589219 SCRN1Q12765 414 aa11.7□□□□□ -0.54
VPS25-202ENST00000589219 MAP3K12Q12852 859 aa11.7□□□□□ -0.54
VPS25-202ENST00000589219 STK3Q13188 491 aa11.7□□□□□ -0.54
VPS25-202ENST00000589219 FOXD4L6Q3SYB3 417 aaPredicted RBP11.7□□□□□ -0.54
VPS25-202ENST00000589219 SLFNL1Q499Z3 407 aa11.7□□□□□ -0.54
VPS25-202ENST00000589219 PI16Q6UXB8 463 aa11.7□□□□□ -0.54
VPS25-202ENST00000589219 FOXD4L3Q6VB84 417 aaPredicted RBP11.7□□□□□ -0.54
VPS25-202ENST00000589219 RALYLQ86SE5 291 aaKnown RBP11.7□□□□□ -0.54
VPS25-202ENST00000589219 MB21D2Q8IYB1 491 aaPredicted RBP11.7□□□□□ -0.54
VPS25-202ENST00000589219 NSUN7Q8NE18 718 aaKnown RBP11.7□□□□□ -0.54
VPS25-202ENST00000589219 NCOA7Q8NI08 942 aa11.7□□□□□ -0.54
VPS25-202ENST00000589219 SCAND2PQ9GZW5 306 aaPredicted RBP11.7□□□□□ -0.54
VPS25-202ENST00000589219 PUS7LQ9H0K6 701 aaKnown RBP11.7□□□□□ -0.54
VPS25-202ENST00000589219 ZSCAN16Q9H4T2 348 aaPredicted RBP11.7□□□□□ -0.54
VPS25-202ENST00000589219 GDPD2Q9HCC8 539 aa11.7□□□□□ -0.54
VPS25-202ENST00000589219 PIH1D3Q9NQM4 214 aaKnown RBP11.7□□□□□ -0.54
VPS25-202ENST00000589219 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
VPS25-202ENST00000589219 SCN4AP35499 1836 aa11.7□□□□□ -0.54
VPS25-202ENST00000589219 ZNF532Q9HCE3 1301 aa11.69□□□□□ -0.54
VPS25-202ENST00000589219 SALL1Q9NSC2 1324 aa11.69□□□□□ -0.54
VPS25-202ENST00000589219 PTPDC1A2A3K4 754 aa11.69□□□□□ -0.54
VPS25-202ENST00000589219 IQCA1LA6NCM1 817 aa11.69□□□□□ -0.54
VPS25-202ENST00000589219 POTECB2RU33 542 aa11.69□□□□□ -0.54
VPS25-202ENST00000589219 H3BQV1 296 aa11.69□□□□□ -0.54
VPS25-202ENST00000589219 ZNF213O14771 459 aa11.69□□□□□ -0.54
VPS25-202ENST00000589219 IDH1O75874 414 aaKnown RBP11.69□□□□□ -0.54
VPS25-202ENST00000589219 RESTQ13127 1097 aa11.69□□□□□ -0.54
VPS25-202ENST00000589219 SF3B3Q15393 1217 aaKnown RBP11.69□□□□□ -0.54
VPS25-202ENST00000589219 ALX1Q15699 326 aa11.69□□□□□ -0.54
VPS25-202ENST00000589219 GRIPAP1Q4V328 841 aa11.69□□□□□ -0.54
VPS25-202ENST00000589219 SLC9C2Q5TAH2 1124 aa11.69□□□□□ -0.54
VPS25-202ENST00000589219 SPATA5Q8NB90 893 aa11.69□□□□□ -0.54
VPS25-202ENST00000589219 RGS22Q8NE09 1264 aa11.69□□□□□ -0.54
VPS25-202ENST00000589219 RPGRQ92834 1020 aaKnown RBP11.69□□□□□ -0.54
VPS25-202ENST00000589219 TRIM44Q96DX7 344 aaPredicted RBP11.69□□□□□ -0.54
VPS25-202ENST00000589219 TCRBV5S4A2TA0A5A2 114 aa11.68□□□□□ -0.54
VPS25-202ENST00000589219 DHX16O60231 1041 aaKnown RBP11.68□□□□□ -0.54
VPS25-202ENST00000589219 JAK2O60674 1132 aa11.68□□□□□ -0.54
VPS25-202ENST00000589219 DDNO94850 711 aaPredicted RBP11.68□□□□□ -0.54
VPS25-202ENST00000589219 FGAP02671 866 aa11.68□□□□□ -0.54
VPS25-202ENST00000589219 GNAT2P19087 354 aa11.68□□□□□ -0.54
VPS25-202ENST00000589219 HTRA3P83110 453 aa11.68□□□□□ -0.54
VPS25-202ENST00000589219 APOBRQ0VD83 1088 aa11.68□□□□□ -0.54
VPS25-202ENST00000589219 TRDNQ13061 729 aa11.68□□□□□ -0.54
VPS25-202ENST00000589219 CRY2Q49AN0 593 aa11.68□□□□□ -0.54
VPS25-202ENST00000589219 ATL3Q6DD88 541 aa11.68□□□□□ -0.54
VPS25-202ENST00000589219 CC2D2BQ6DHV5 1058 aa11.68□□□□□ -0.54
VPS25-202ENST00000589219 TTLL5Q6EMB2 1281 aa11.68□□□□□ -0.54
VPS25-202ENST00000589219 JMYQ8N9B5 988 aa11.68□□□□□ -0.54
VPS25-202ENST00000589219 AIDAQ96BJ3 306 aa11.68□□□□□ -0.54
VPS25-202ENST00000589219 RBSNQ9H1K0 784 aa11.68□□□□□ -0.54
VPS25-202ENST00000589219 ZNF804BA4D1E1 1349 aa11.67□□□□□ -0.54
VPS25-202ENST00000589219 PRC1O43663 620 aa11.67□□□□□ -0.54
VPS25-202ENST00000589219 CHRNDQ07001 517 aa11.67□□□□□ -0.54
VPS25-202ENST00000589219 RASGRF1Q13972 1273 aa11.67□□□□□ -0.54
VPS25-202ENST00000589219 UBE4AQ14139 1066 aa11.67□□□□□ -0.54
VPS25-202ENST00000589219 SLC10A5Q5PT55 438 aa11.67□□□□□ -0.54
VPS25-202ENST00000589219 ANKRD18AQ8IVF6 992 aa11.67□□□□□ -0.54
VPS25-202ENST00000589219 RBM17Q96I25 401 aaKnown RBP11.67□□□□□ -0.54
VPS25-202ENST00000589219 LRRC2Q9BYS8 371 aa11.67□□□□□ -0.54
VPS25-202ENST00000589219 SEC31BQ9NQW1 1179 aa11.67□□□□□ -0.54
VPS25-202ENST00000589219 ZNF277Q9NRM2 450 aaPredicted RBP11.67□□□□□ -0.54
VPS25-202ENST00000589219 GNL3LQ9NVN8 582 aaKnown RBP11.67□□□□□ -0.54
VPS25-202ENST00000589219 PDS5AQ29RF7 1337 aaKnown RBP11.66□□□□□ -0.54
VPS25-202ENST00000589219 PDIA3P30101 505 aaKnown RBP11.66□□□□□ -0.54
VPS25-202ENST00000589219 HOXA10P31260 410 aaPredicted RBP11.66□□□□□ -0.54
VPS25-202ENST00000589219 HAND2P61296 217 aa11.66□□□□□ -0.54
VPS25-202ENST00000589219 UVSSAQ2YD98 709 aa11.66□□□□□ -0.54
VPS25-202ENST00000589219 HS1BP3Q53T59 392 aa11.66□□□□□ -0.54
VPS25-202ENST00000589219 CHADLQ6NUI6 762 aa11.66□□□□□ -0.54
VPS25-202ENST00000589219 TTC6Q86TZ1 520 aa11.66□□□□□ -0.54
VPS25-202ENST00000589219 JDP2Q8WYK2 163 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms