RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 GPR75-ASB3A0A0A6YYF3 556 aa22.97■■□□□ 1.27
CLPTM1-209ENST00000588855 TCRBV5S4A2TA0A5A2 114 aa22.97■■□□□ 1.27
CLPTM1-209ENST00000588855 TRIM6-TRIM34B2RNG4 842 aa22.97■■□□□ 1.27
CLPTM1-209ENST00000588855 GSPT1P15170 499 aaKnown RBP22.97■■□□□ 1.27
CLPTM1-209ENST00000588855 ADD2P35612 726 aa22.97■■□□□ 1.27
CLPTM1-209ENST00000588855 RGS3P49796 1198 aa22.97■■□□□ 1.27
CLPTM1-209ENST00000588855 SPDYE2Q495Y8 402 aa22.97■■□□□ 1.27
CLPTM1-209ENST00000588855 CHADLQ6NUI6 762 aa22.97■■□□□ 1.27
CLPTM1-209ENST00000588855 EVI5LQ96CN4 794 aa22.97■■□□□ 1.27
CLPTM1-209ENST00000588855 ZNF70Q9UC06 446 aaPredicted RBP22.97■■□□□ 1.27
CLPTM1-209ENST00000588855 PITPNM2Q9BZ72 1349 aa22.96■■□□□ 1.27
CLPTM1-209ENST00000588855 CDC42EP5Q6NZY7 148 aa22.96■■□□□ 1.27
CLPTM1-209ENST00000588855 RBM46Q8TBY0 533 aaKnown RBP22.96■■□□□ 1.27
CLPTM1-209ENST00000588855 VEZTQ9HBM0 779 aa22.96■■□□□ 1.27
CLPTM1-209ENST00000588855 CACNB3P54284 484 aa22.95■■□□□ 1.26
CLPTM1-209ENST00000588855 TMED8Q6PL24 325 aaPredicted RBP22.95■■□□□ 1.26
CLPTM1-209ENST00000588855 CNTROBQ8N137 903 aa22.95■■□□□ 1.26
CLPTM1-209ENST00000588855 RILPL2Q969X0 211 aa22.95■■□□□ 1.26
CLPTM1-209ENST00000588855 DCPSQ96C86 337 aaKnown RBP22.95■■□□□ 1.26
CLPTM1-209ENST00000588855 AATFQ9NY61 560 aaKnown RBP eCLIP22.95■■□□□ 1.26
CLPTM1-209ENST00000588855 ZSCAN25Q6NSZ9 544 aa22.94■■□□□ 1.26
CLPTM1-209ENST00000588855 MIGA1Q8NAN2 632 aa22.94■■□□□ 1.26
CLPTM1-209ENST00000588855 SMC1BQ8NDV3 1235 aa22.94■■□□□ 1.26
CLPTM1-209ENST00000588855 USP40Q9NVE5 1235 aa22.94■■□□□ 1.26
CLPTM1-209ENST00000588855 FOCADQ5VW36 1801 aa22.94■■□□□ 1.26
CLPTM1-209ENST00000588855 RHBDL3P58872 404 aa22.93■■□□□ 1.26
CLPTM1-209ENST00000588855 UBE3CQ15386 1083 aa22.93■■□□□ 1.26
CLPTM1-209ENST00000588855 NOL10Q9BSC4 688 aaKnown RBP22.93■■□□□ 1.26
CLPTM1-209ENST00000588855 GLIS2Q9BZE0 524 aaPredicted RBP22.93■■□□□ 1.26
CLPTM1-209ENST00000588855 GTF3C3Q9Y5Q9 886 aa22.93■■□□□ 1.26
CLPTM1-209ENST00000588855 ADM5C9JUS6 153 aa22.92■■□□□ 1.26
CLPTM1-209ENST00000588855 DYNLL1P63167 89 aaKnown RBP22.92■■□□□ 1.26
CLPTM1-209ENST00000588855 KRT26Q7Z3Y9 468 aa22.92■■□□□ 1.26
CLPTM1-209ENST00000588855 APOBEC3FQ8IUX4 373 aaKnown RBP22.92■■□□□ 1.26
CLPTM1-209ENST00000588855 RFX7Q2KHR2 1363 aa22.92■■□□□ 1.26
CLPTM1-209ENST00000588855 RNF113AO15541 343 aaKnown RBP22.92■■□□□ 1.26
CLPTM1-209ENST00000588855 BAG3O95817 575 aa22.92■■□□□ 1.26
CLPTM1-209ENST00000588855 DLK2Q6UY11 383 aa22.92■■□□□ 1.26
CLPTM1-209ENST00000588855 SULF1Q8IWU6 871 aa22.92■■□□□ 1.26
CLPTM1-209ENST00000588855 SH3RF3Q8TEJ3 882 aaPredicted RBP22.92■■□□□ 1.26
CLPTM1-209ENST00000588855 TMOD2Q9NZR1 351 aa22.92■■□□□ 1.26
CLPTM1-209ENST00000588855 TCP10L2B9ZVM9 353 aa22.91■■□□□ 1.26
CLPTM1-209ENST00000588855 ZFYP08048 801 aaPredicted RBP22.91■■□□□ 1.26
CLPTM1-209ENST00000588855 PPP4CP60510 307 aa22.91■■□□□ 1.26
CLPTM1-209ENST00000588855 CDC37L1Q7L3B6 337 aa22.91■■□□□ 1.26
CLPTM1-209ENST00000588855 USP48Q86UV5 1035 aa22.91■■□□□ 1.26
CLPTM1-209ENST00000588855 RIOK1Q9BRS2 568 aaKnown RBP22.91■■□□□ 1.26
CLPTM1-209ENST00000588855 SDSP20132 328 aa22.9■■□□□ 1.26
CLPTM1-209ENST00000588855 NFIAQ12857 509 aa22.9■■□□□ 1.26
CLPTM1-209ENST00000588855 LRRFIP1Q32MZ4 808 aaKnown RBP22.9■■□□□ 1.26
CLPTM1-209ENST00000588855 MAGEB6P1A0A0J9YX57 407 aa22.89■■□□□ 1.26
CLPTM1-209ENST00000588855 TRAF5O00463 557 aa22.89■■□□□ 1.26
CLPTM1-209ENST00000588855 ITGBL1O95965 494 aaPredicted RBP22.89■■□□□ 1.26
CLPTM1-209ENST00000588855 APPBP2Q92624 585 aa22.89■■□□□ 1.26
CLPTM1-209ENST00000588855 PUS7LQ9H0K6 701 aaKnown RBP22.89■■□□□ 1.26
CLPTM1-209ENST00000588855 TRPM7Q96QT4 1865 aa22.89■■□□□ 1.25
CLPTM1-209ENST00000588855 CNTNAP1P78357 1384 aa22.89■■□□□ 1.25
CLPTM1-209ENST00000588855 WDHD1O75717 1129 aaPredicted RBP22.88■■□□□ 1.25
CLPTM1-209ENST00000588855 FMR1Q06787 632 aaKnown RBP eCLIP22.88■■□□□ 1.25
CLPTM1-209ENST00000588855 FSTL1Q12841 308 aa22.88■■□□□ 1.25
CLPTM1-209ENST00000588855 TEX11Q8IYF3 940 aa22.88■■□□□ 1.25
CLPTM1-209ENST00000588855 LCORLQ8N3X6 602 aa22.88■■□□□ 1.25
CLPTM1-209ENST00000588855 OSBP2Q969R2 916 aa22.88■■□□□ 1.25
CLPTM1-209ENST00000588855 DEFB129Q9H1M3 183 aa22.88■■□□□ 1.25
CLPTM1-209ENST00000588855 FAM198AQ9UFP1 575 aa22.88■■□□□ 1.25
CLPTM1-209ENST00000588855 MBD4O95243 580 aa22.87■■□□□ 1.25
CLPTM1-209ENST00000588855 PLCG2P16885 1265 aa22.87■■□□□ 1.25
CLPTM1-209ENST00000588855 TNFAIP1Q13829 316 aa22.87■■□□□ 1.25
CLPTM1-209ENST00000588855 RASA3Q14644 834 aa22.87■■□□□ 1.25
CLPTM1-209ENST00000588855 FKBP1CQ5VVH2 108 aa22.87■■□□□ 1.25
CLPTM1-209ENST00000588855 IDI2Q9BXS1 227 aa22.87■■□□□ 1.25
CLPTM1-209ENST00000588855 ARMT1Q9H993 441 aa22.87■■□□□ 1.25
CLPTM1-209ENST00000588855 DDX4Q9NQI0 724 aaKnown RBP22.87■■□□□ 1.25
CLPTM1-209ENST00000588855 NAV1Q8NEY1 1877 aa22.87■■□□□ 1.25
CLPTM1-209ENST00000588855 PICALMQ13492 652 aa22.87■■□□□ 1.25
CLPTM1-209ENST00000588855 ZMYM1Q5SVZ6 1142 aa22.87■■□□□ 1.25
CLPTM1-209ENST00000588855 PRAMEF18Q5VWM3 479 aa22.87■■□□□ 1.25
CLPTM1-209ENST00000588855 SEC62Q99442 399 aaKnown RBP22.87■■□□□ 1.25
CLPTM1-209ENST00000588855 M0R2C6 588 aa22.86■■□□□ 1.25
CLPTM1-209ENST00000588855 TNNI2P48788 182 aa22.86■■□□□ 1.25
CLPTM1-209ENST00000588855 TCP10Q12799 353 aa22.86■■□□□ 1.25
CLPTM1-209ENST00000588855 FAM83AQ86UY5 434 aa22.86■■□□□ 1.25
CLPTM1-209ENST00000588855 CERS3Q8IU89 383 aa22.86■■□□□ 1.25
CLPTM1-209ENST00000588855 AIDAQ96BJ3 306 aa22.86■■□□□ 1.25
CLPTM1-209ENST00000588855 CDCA5Q96FF9 252 aa22.86■■□□□ 1.25
CLPTM1-209ENST00000588855 TMEM39BQ9GZU3 492 aa22.86■■□□□ 1.25
CLPTM1-209ENST00000588855 PASKQ96RG2 1323 aa22.86■■□□□ 1.25
CLPTM1-209ENST00000588855 DDX60LQ5H9U9 1706 aaKnown RBP22.85■■□□□ 1.25
CLPTM1-209ENST00000588855 BMP2KLQ5H9B9 411 aa22.85■■□□□ 1.25
CLPTM1-209ENST00000588855 TICAM2Q86XR7 235 aa22.85■■□□□ 1.25
CLPTM1-209ENST00000588855 CDAN1Q8IWY9 1227 aa22.85■■□□□ 1.25
CLPTM1-209ENST00000588855 FAM227BQ96M60 508 aa22.85■■□□□ 1.25
CLPTM1-209ENST00000588855 MYH1P12882 1939 aa22.85■■□□□ 1.25
CLPTM1-209ENST00000588855 A0A0D9SFI3 127 aa22.84■■□□□ 1.25
CLPTM1-209ENST00000588855 NMIQ13287 307 aaPredicted RBP22.84■■□□□ 1.25
CLPTM1-209ENST00000588855 ZFPM1Q8IX07 1006 aa22.84■■□□□ 1.25
CLPTM1-209ENST00000588855 TGFBRAP1Q8WUH2 860 aa22.84■■□□□ 1.25
CLPTM1-209ENST00000588855 PPP2R3BQ9Y5P8 575 aa22.84■■□□□ 1.25
CLPTM1-209ENST00000588855 ENTPD3O75355 529 aa22.83■■□□□ 1.25
CLPTM1-209ENST00000588855 MAPKAPK5Q8IW41 473 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms