RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 USP40Q9NVE5 1235 aa10.95□□□□□ -0.66
CIRBP-218ENST00000588344 NDUFB9Q9Y6M9 179 aa10.95□□□□□ -0.66
CIRBP-218ENST00000588344 CCDC88AQ3V6T2 1871 aa10.95□□□□□ -0.66
CIRBP-218ENST00000588344 BTDP43251 543 aa10.94□□□□□ -0.66
CIRBP-218ENST00000588344 TTC22Q5TAA0 569 aa10.94□□□□□ -0.66
CIRBP-218ENST00000588344 ANGEL2Q5VTE6 544 aaKnown RBP10.94□□□□□ -0.66
CIRBP-218ENST00000588344 KRT26Q7Z3Y9 468 aa10.94□□□□□ -0.66
CIRBP-218ENST00000588344 FAM83AQ86UY5 434 aa10.94□□□□□ -0.66
CIRBP-218ENST00000588344 ZNF384Q8TF68 577 aa10.94□□□□□ -0.66
CIRBP-218ENST00000588344 RILPL2Q969X0 211 aa10.94□□□□□ -0.66
CIRBP-218ENST00000588344 EDC3Q96F86 508 aaKnown RBP10.94□□□□□ -0.66
CIRBP-218ENST00000588344 IDI2Q9BXS1 227 aa10.94□□□□□ -0.66
CIRBP-218ENST00000588344 TDRD3Q9H7E2 651 aaKnown RBP10.94□□□□□ -0.66
CIRBP-218ENST00000588344 GGA3Q9NZ52 723 aa10.94□□□□□ -0.66
CIRBP-218ENST00000588344 ZNF70Q9UC06 446 aaPredicted RBP10.94□□□□□ -0.66
CIRBP-218ENST00000588344 SCN4AP35499 1836 aa10.93□□□□□ -0.66
CIRBP-218ENST00000588344 ZNF532Q9HCE3 1301 aa10.93□□□□□ -0.66
CIRBP-218ENST00000588344 TCRBV5S4A2TA0A5A2 114 aa10.93□□□□□ -0.66
CIRBP-218ENST00000588344 ENTPD3O75355 529 aa10.93□□□□□ -0.66
CIRBP-218ENST00000588344 SUPT20HL1Q3ZLR7 823 aa10.93□□□□□ -0.66
CIRBP-218ENST00000588344 CDC42EP5Q6NZY7 148 aa10.93□□□□□ -0.66
CIRBP-218ENST00000588344 APPBP2Q92624 585 aa10.93□□□□□ -0.66
CIRBP-218ENST00000588344 DEFB129Q9H1M3 183 aa10.93□□□□□ -0.66
CIRBP-218ENST00000588344 SCN9AQ15858 1988 aa10.93□□□□□ -0.66
CIRBP-218ENST00000588344 RFX7Q2KHR2 1363 aa10.92□□□□□ -0.66
CIRBP-218ENST00000588344 MAGEB6P1A0A0J9YX57 407 aa10.92□□□□□ -0.66
CIRBP-218ENST00000588344 GNAT2P19087 354 aa10.92□□□□□ -0.66
CIRBP-218ENST00000588344 NF2P35240 595 aa10.92□□□□□ -0.66
CIRBP-218ENST00000588344 MFAP1P55081 439 aaKnown RBP10.92□□□□□ -0.66
CIRBP-218ENST00000588344 BMP2KLQ5H9B9 411 aa10.92□□□□□ -0.66
CIRBP-218ENST00000588344 MAP1SQ66K74 1059 aaPredicted RBP10.92□□□□□ -0.66
CIRBP-218ENST00000588344 USP48Q86UV5 1035 aa10.92□□□□□ -0.66
CIRBP-218ENST00000588344 FAM151AQ8WW52 585 aa10.92□□□□□ -0.66
CIRBP-218ENST00000588344 AIDAQ96BJ3 306 aa10.92□□□□□ -0.66
CIRBP-218ENST00000588344 DDRGK1Q96HY6 314 aa10.92□□□□□ -0.66
CIRBP-218ENST00000588344 VEZTQ9HBM0 779 aa10.92□□□□□ -0.66
CIRBP-218ENST00000588344 HELLSQ9NRZ9 838 aa10.92□□□□□ -0.66
CIRBP-218ENST00000588344 CLRN2A0PK11 232 aa10.91□□□□□ -0.66
CIRBP-218ENST00000588344 ITGBL1O95965 494 aaPredicted RBP10.91□□□□□ -0.66
CIRBP-218ENST00000588344 POTEIP0CG38 1075 aa10.91□□□□□ -0.66
CIRBP-218ENST00000588344 POTEJP0CG39 1038 aa10.91□□□□□ -0.66
CIRBP-218ENST00000588344 SDSP20132 328 aa10.91□□□□□ -0.66
CIRBP-218ENST00000588344 RHBDL3P58872 404 aa10.91□□□□□ -0.66
CIRBP-218ENST00000588344 RASA3Q14644 834 aa10.91□□□□□ -0.66
CIRBP-218ENST00000588344 TEX11Q8IYF3 940 aa10.91□□□□□ -0.66
CIRBP-218ENST00000588344 RUFY2Q8WXA3 655 aa10.91□□□□□ -0.66
CIRBP-218ENST00000588344 CRNKL1Q9BZJ0 848 aaKnown RBP10.91□□□□□ -0.66
CIRBP-218ENST00000588344 DHX36Q9H2U1 1008 aaKnown RBP10.91□□□□□ -0.66
CIRBP-218ENST00000588344 ATP8A2Q9NTI2 1148 aa10.91□□□□□ -0.66
CIRBP-218ENST00000588344 AATFQ9NY61 560 aaKnown RBP eCLIP10.91□□□□□ -0.66
CIRBP-218ENST00000588344 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
CIRBP-218ENST00000588344 PCDHAC2Q9Y5I4 1007 aa10.91□□□□□ -0.66
CIRBP-218ENST00000588344 TCP10L2B9ZVM9 353 aa10.9□□□□□ -0.66
CIRBP-218ENST00000588344 USP5P45974 858 aa10.9□□□□□ -0.66
CIRBP-218ENST00000588344 MCMDC2Q4G0Z9 681 aa10.9□□□□□ -0.66
CIRBP-218ENST00000588344 ZMYM1Q5SVZ6 1142 aa10.9□□□□□ -0.66
CIRBP-218ENST00000588344 GIMAP6Q6P9H5 292 aa10.9□□□□□ -0.66
CIRBP-218ENST00000588344 ADGRA1Q86SQ6 560 aa10.9□□□□□ -0.66
CIRBP-218ENST00000588344 MIGA1Q8NAN2 632 aa10.9□□□□□ -0.66
CIRBP-218ENST00000588344 SH3RF3Q8TEJ3 882 aaPredicted RBP10.9□□□□□ -0.66
CIRBP-218ENST00000588344 RIOK1Q9BRS2 568 aaKnown RBP10.9□□□□□ -0.66
CIRBP-218ENST00000588344 PSME4Q14997 1843 aa10.9□□□□□ -0.66
CIRBP-218ENST00000588344 RPAP1Q9BWH6 1393 aaPredicted RBP10.9□□□□□ -0.67
CIRBP-218ENST00000588344 ASTN2O75129 1339 aaPredicted RBP10.89□□□□□ -0.67
CIRBP-218ENST00000588344 UNCXA6NJT0 531 aa10.89□□□□□ -0.67
CIRBP-218ENST00000588344 WDHD1O75717 1129 aaPredicted RBP10.89□□□□□ -0.67
CIRBP-218ENST00000588344 GSPT1P15170 499 aaKnown RBP10.89□□□□□ -0.67
CIRBP-218ENST00000588344 RGS3P49796 1198 aa10.89□□□□□ -0.67
CIRBP-218ENST00000588344 FKBP1BP68106 108 aa10.89□□□□□ -0.67
CIRBP-218ENST00000588344 CASC1Q6TDU7 716 aa10.89□□□□□ -0.67
CIRBP-218ENST00000588344 TGFBRAP1Q8WUH2 860 aa10.89□□□□□ -0.67
CIRBP-218ENST00000588344 OSBP2Q969R2 916 aa10.89□□□□□ -0.67
CIRBP-218ENST00000588344 STRBPQ96SI9 672 aaKnown RBP10.89□□□□□ -0.67
CIRBP-218ENST00000588344 GLIS2Q9BZE0 524 aaPredicted RBP10.89□□□□□ -0.67
CIRBP-218ENST00000588344 NACAP1Q9BZK3 213 aa10.89□□□□□ -0.67
CIRBP-218ENST00000588344 DIAPH3Q9NSV4 1193 aa10.89□□□□□ -0.67
CIRBP-218ENST00000588344 FAM198AQ9UFP1 575 aa10.89□□□□□ -0.67
CIRBP-218ENST00000588344 PASKQ96RG2 1323 aa10.88□□□□□ -0.67
CIRBP-218ENST00000588344 PATL2C9JE40 543 aaKnown RBP10.88□□□□□ -0.67
CIRBP-218ENST00000588344 PPP1R12BO60237 982 aaPredicted RBP10.88□□□□□ -0.67
CIRBP-218ENST00000588344 MBD4O95243 580 aa10.88□□□□□ -0.67
CIRBP-218ENST00000588344 DYNLL1P63167 89 aaKnown RBP10.88□□□□□ -0.67
CIRBP-218ENST00000588344 TTC6Q86TZ1 520 aa10.88□□□□□ -0.67
CIRBP-218ENST00000588344 FOXP4Q8IVH2 680 aaPredicted RBP10.88□□□□□ -0.67
CIRBP-218ENST00000588344 AMOTL1Q8IY63 956 aa10.88□□□□□ -0.67
CIRBP-218ENST00000588344 C2orf69Q8N8R5 385 aa10.88□□□□□ -0.67
CIRBP-218ENST00000588344 CDCA5Q96FF9 252 aa10.88□□□□□ -0.67
CIRBP-218ENST00000588344 PUS7LQ9H0K6 701 aaKnown RBP10.88□□□□□ -0.67
CIRBP-218ENST00000588344 OSBPL5Q9H0X9 879 aaPredicted RBP10.88□□□□□ -0.67
CIRBP-218ENST00000588344 PI4KBQ9UBF8 816 aa10.88□□□□□ -0.67
CIRBP-218ENST00000588344 GTF3C3Q9Y5Q9 886 aa10.88□□□□□ -0.67
CIRBP-218ENST00000588344 ADM5C9JUS6 153 aa10.87□□□□□ -0.67
CIRBP-218ENST00000588344 GPAA1O43292 621 aa10.87□□□□□ -0.67
CIRBP-218ENST00000588344 EIF5BO60841 1220 aaKnown RBP10.87□□□□□ -0.67
CIRBP-218ENST00000588344 CACNB3P54284 484 aa10.87□□□□□ -0.67
CIRBP-218ENST00000588344 C1QTNF8P60827 252 aa10.87□□□□□ -0.67
CIRBP-218ENST00000588344 TCP10Q12799 353 aa10.87□□□□□ -0.67
CIRBP-218ENST00000588344 NFIAQ12857 509 aa10.87□□□□□ -0.67
CIRBP-218ENST00000588344 PICALMQ13492 652 aa10.87□□□□□ -0.67
CIRBP-218ENST00000588344 DCAF15Q66K64 600 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms