RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 CCDC136Q96JN2 1154 aa14.4□□□□□ -0.1
SDHDP1-201ENST00000588055 MYH7P12883 1935 aa14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 TMEM88BA6NKF7 163 aa14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 TCP10L2B9ZVM9 353 aa14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 CELF2O95319 508 aaKnown RBP14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 MAP4K4O95819 1239 aaPredicted RBP14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 CYP7A1P22680 504 aa14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 APOBEC3HQ6NTF7 200 aaKnown RBP14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 CENPQQ7L2Z9 268 aaPredicted RBP14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 MAGEB6Q8N7X4 407 aa14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 CDCA5Q96FF9 252 aa14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 FAM163AQ96GL9 167 aaPredicted RBP14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 DEFB129Q9H1M3 183 aa14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 ANTXR1Q9H6X2 564 aa14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 USP40Q9NVE5 1235 aa14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 POLR2AP24928 1970 aaKnown RBP14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 MYO5AQ9Y4I1 1855 aaKnown RBP14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 AOX1Q06278 1338 aa14.39□□□□□ -0.11
SDHDP1-201ENST00000588055 SLC9C2Q5TAH2 1124 aa14.38□□□□□ -0.11
SDHDP1-201ENST00000588055 FKBP1CQ5VVH2 108 aa14.38□□□□□ -0.11
SDHDP1-201ENST00000588055 OTUD7AQ8TE49 926 aaPredicted RBP14.38□□□□□ -0.11
SDHDP1-201ENST00000588055 CREBZFQ9NS37 354 aa14.38□□□□□ -0.11
SDHDP1-201ENST00000588055 ABT1Q9ULW3 272 aaKnown RBP14.38□□□□□ -0.11
SDHDP1-201ENST00000588055 PAPPA2Q9BXP8 1791 aa14.37□□□□□ -0.11
SDHDP1-201ENST00000588055 RPAP1Q9BWH6 1393 aaPredicted RBP14.37□□□□□ -0.11
SDHDP1-201ENST00000588055 GPR75-ASB3A0A0A6YYF3 556 aa14.37□□□□□ -0.11
SDHDP1-201ENST00000588055 PDE1AP54750 535 aa14.37□□□□□ -0.11
SDHDP1-201ENST00000588055 TTLL12Q14166 644 aaPredicted RBP14.37□□□□□ -0.11
SDHDP1-201ENST00000588055 RASA3Q14644 834 aa14.37□□□□□ -0.11
SDHDP1-201ENST00000588055 SUPT20HL1Q3ZLR7 823 aa14.37□□□□□ -0.11
SDHDP1-201ENST00000588055 ERICH6BQ5W0A0 696 aa14.37□□□□□ -0.11
SDHDP1-201ENST00000588055 CDC42EP5Q6NZY7 148 aa14.37□□□□□ -0.11
SDHDP1-201ENST00000588055 C2orf69Q8N8R5 385 aa14.37□□□□□ -0.11
SDHDP1-201ENST00000588055 HOOK2Q96ED9 719 aa14.37□□□□□ -0.11
SDHDP1-201ENST00000588055 AATFQ9NY61 560 aaKnown RBP eCLIP14.37□□□□□ -0.11
SDHDP1-201ENST00000588055 SCAF8Q9UPN6 1271 aaKnown RBP14.37□□□□□ -0.11
SDHDP1-201ENST00000588055 SALL3Q9BXA9 1300 aa14.37□□□□□ -0.11
SDHDP1-201ENST00000588055 PDE6AP16499 860 aa14.36□□□□□ -0.11
SDHDP1-201ENST00000588055 CACNB3P54284 484 aa14.36□□□□□ -0.11
SDHDP1-201ENST00000588055 FAM83AQ86UY5 434 aa14.36□□□□□ -0.11
SDHDP1-201ENST00000588055 TEX11Q8IYF3 940 aa14.36□□□□□ -0.11
SDHDP1-201ENST00000588055 PI4K2BQ8TCG2 481 aa14.36□□□□□ -0.11
SDHDP1-201ENST00000588055 EDC3Q96F86 508 aaKnown RBP14.36□□□□□ -0.11
SDHDP1-201ENST00000588055 FSD1Q9BTV5 496 aa14.36□□□□□ -0.11
SDHDP1-201ENST00000588055 STAP2Q9UGK3 403 aa14.36□□□□□ -0.11
SDHDP1-201ENST00000588055 ZFYP08048 801 aaPredicted RBP14.35□□□□□ -0.11
SDHDP1-201ENST00000588055 FKBP1BP68106 108 aa14.35□□□□□ -0.11
SDHDP1-201ENST00000588055 PICALMQ13492 652 aa14.35□□□□□ -0.11
SDHDP1-201ENST00000588055 KBTBD3Q8NAB2 608 aa14.35□□□□□ -0.11
SDHDP1-201ENST00000588055 MIGA1Q8NAN2 632 aa14.35□□□□□ -0.11
SDHDP1-201ENST00000588055 ZNF384Q8TF68 577 aa14.35□□□□□ -0.11
SDHDP1-201ENST00000588055 GBA2Q9HCG7 927 aaPredicted RBP14.35□□□□□ -0.11
SDHDP1-201ENST00000588055 ZNF532Q9HCE3 1301 aa14.35□□□□□ -0.11
SDHDP1-201ENST00000588055 MAGEB6P1A0A0J9YX57 407 aa14.34□□□□□ -0.11
SDHDP1-201ENST00000588055 TRIM6-TRIM34B2RNG4 842 aa14.34□□□□□ -0.11
SDHDP1-201ENST00000588055 PPP1R12BO60237 982 aaPredicted RBP14.34□□□□□ -0.11
SDHDP1-201ENST00000588055 TCP10Q12799 353 aa14.34□□□□□ -0.11
SDHDP1-201ENST00000588055 PAXIP1Q6ZW49 1069 aaPredicted RBP14.34□□□□□ -0.11
SDHDP1-201ENST00000588055 ZSCAN29Q8IWY8 852 aaPredicted RBP14.34□□□□□ -0.11
SDHDP1-201ENST00000588055 EVI5LQ96CN4 794 aa14.34□□□□□ -0.11
SDHDP1-201ENST00000588055 IDI2Q9BXS1 227 aa14.34□□□□□ -0.11
SDHDP1-201ENST00000588055 TMEM39BQ9GZU3 492 aa14.34□□□□□ -0.11
SDHDP1-201ENST00000588055 AK9Q5TCS8 1911 aa14.34□□□□□ -0.11
SDHDP1-201ENST00000588055 RFX7Q2KHR2 1363 aa14.34□□□□□ -0.11
SDHDP1-201ENST00000588055 ENTPD3O75355 529 aa14.33□□□□□ -0.12
SDHDP1-201ENST00000588055 ADD2P35612 726 aa14.33□□□□□ -0.12
SDHDP1-201ENST00000588055 RGS3P49796 1198 aa14.33□□□□□ -0.12
SDHDP1-201ENST00000588055 FMR1Q06787 632 aaKnown RBP eCLIP14.33□□□□□ -0.12
SDHDP1-201ENST00000588055 UBE3CQ15386 1083 aa14.33□□□□□ -0.12
SDHDP1-201ENST00000588055 PRAMEF18Q5VWM3 479 aa14.33□□□□□ -0.12
SDHDP1-201ENST00000588055 DCAF15Q66K64 600 aa14.33□□□□□ -0.12
SDHDP1-201ENST00000588055 ARMC9Q7Z3E5 817 aa14.33□□□□□ -0.12
SDHDP1-201ENST00000588055 ADGRA1Q86SQ6 560 aa14.33□□□□□ -0.12
SDHDP1-201ENST00000588055 SH3RF3Q8TEJ3 882 aaPredicted RBP14.33□□□□□ -0.12
SDHDP1-201ENST00000588055 FAM151AQ8WW52 585 aa14.33□□□□□ -0.12
SDHDP1-201ENST00000588055 FOCADQ5VW36 1801 aa14.33□□□□□ -0.12
SDHDP1-201ENST00000588055 CNTNAP1P78357 1384 aa14.33□□□□□ -0.12
SDHDP1-201ENST00000588055 COL2A1P02458 1487 aaPredicted RBP14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 USP5P45974 858 aa14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 IREB2P48200 963 aaKnown RBP14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 HUNKP57058 714 aa14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 RHBDL3P58872 404 aa14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 PPP4CP60510 307 aa14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 NFIAQ12857 509 aa14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 CST9Q5W186 159 aa14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 DLK2Q6UY11 383 aa14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 PLEKHM2Q8IWE5 1019 aa14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 AIDAQ96BJ3 306 aa14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 DDRGK1Q96HY6 314 aa14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 CRNKL1Q9BZJ0 848 aaKnown RBP14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 OSBPL3Q9H4L5 887 aa14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 TLL2Q9Y6L7 1015 aa14.32□□□□□ -0.12
SDHDP1-201ENST00000588055 NAV1Q8NEY1 1877 aa14.31□□□□□ -0.12
SDHDP1-201ENST00000588055 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
SDHDP1-201ENST00000588055 WDHD1O75717 1129 aaPredicted RBP14.31□□□□□ -0.12
SDHDP1-201ENST00000588055 RILPL2Q969X0 211 aa14.31□□□□□ -0.12
SDHDP1-201ENST00000588055 CSRNP1Q96S65 589 aa14.31□□□□□ -0.12
SDHDP1-201ENST00000588055 PPP4R2Q9NY27 417 aa14.31□□□□□ -0.12
SDHDP1-201ENST00000588055 FAM198AQ9UFP1 575 aa14.31□□□□□ -0.12
SDHDP1-201ENST00000588055 CDK5RAP2Q96SN8 1893 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms