RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 CEP85Q6P2H3 762 aa22.05■■□□□ 1.12
ERBB2-221ENST00000584888 OPTNQ96CV9 577 aa22.05■■□□□ 1.12
ERBB2-221ENST00000584888 TMOD2Q9NZR1 351 aa22.05■■□□□ 1.12
ERBB2-221ENST00000584888 SEMA3EO15041 775 aa22.04■■□□□ 1.12
ERBB2-221ENST00000584888 SOX10P56693 466 aa22.04■■□□□ 1.12
ERBB2-221ENST00000584888 FKBP1CQ5VVH2 108 aa22.04■■□□□ 1.12
ERBB2-221ENST00000584888 FAM83AQ86UY5 434 aa22.04■■□□□ 1.12
ERBB2-221ENST00000584888 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.04■■□□□ 1.128e-7■■□□□ 13.3
ERBB2-221ENST00000584888 XAGE2Q96GT9 111 aa22.04■■□□□ 1.12
ERBB2-221ENST00000584888 GNL3LQ9NVN8 582 aaKnown RBP22.04■■□□□ 1.12
ERBB2-221ENST00000584888 TESPA1A2RU30 521 aaPredicted RBP22.03■■□□□ 1.12
ERBB2-221ENST00000584888 VGLL4Q14135 290 aa22.03■■□□□ 1.12
ERBB2-221ENST00000584888 OTUD7BQ6GQQ9 843 aa22.03■■□□□ 1.12
ERBB2-221ENST00000584888 PTPN18Q99952 460 aa22.03■■□□□ 1.12
ERBB2-221ENST00000584888 ZBTB40Q9NUA8 1239 aa22.03■■□□□ 1.12
ERBB2-221ENST00000584888 DENND2AQ9ULE3 1009 aa22.03■■□□□ 1.12
ERBB2-221ENST00000584888 SALL1Q9NSC2 1324 aa22.03■■□□□ 1.12
ERBB2-221ENST00000584888 PDE3AQ14432 1141 aa22.02■■□□□ 1.12
ERBB2-221ENST00000584888 CNKSR2Q8WXI2 1034 aa22.02■■□□□ 1.12
ERBB2-221ENST00000584888 MS4A4AQ96JQ5 239 aa22.02■■□□□ 1.12
ERBB2-221ENST00000584888 GPR108Q9NPR9 543 aa22.02■■□□□ 1.12
ERBB2-221ENST00000584888 DDX19BQ9UMR2 479 aa22.02■■□□□ 1.12
ERBB2-221ENST00000584888 COG6Q9Y2V7 657 aa22.02■■□□□ 1.12
ERBB2-221ENST00000584888 CSADQ9Y600 493 aa22.02■■□□□ 1.12
ERBB2-221ENST00000584888 PDS5AQ29RF7 1337 aaKnown RBP22.02■■□□□ 1.12
ERBB2-221ENST00000584888 FBXO46Q6PJ61 603 aaPredicted RBP22.01■■□□□ 1.11
ERBB2-221ENST00000584888 SURF6O75683 361 aaKnown RBP22■■□□□ 1.11
ERBB2-221ENST00000584888 PRDX5P30044 214 aa22■■□□□ 1.11
ERBB2-221ENST00000584888 CRHR2Q13324 411 aa22■■□□□ 1.11
ERBB2-221ENST00000584888 DIXDC1Q155Q3 683 aa22■■□□□ 1.11
ERBB2-221ENST00000584888 C20orf194Q5TEA3 1177 aa22■■□□□ 1.11
ERBB2-221ENST00000584888 DAGLAQ9Y4D2 1042 aa22■■□□□ 1.11
ERBB2-221ENST00000584888 LAMB1P07942 1786 aa21.99■■□□□ 1.11
ERBB2-221ENST00000584888 OTOFQ9HC10 1997 aa21.99■■□□□ 1.11
ERBB2-221ENST00000584888 RASGRF1Q13972 1273 aa21.99■■□□□ 1.11
ERBB2-221ENST00000584888 HOOK2Q96ED9 719 aa21.99■■□□□ 1.11
ERBB2-221ENST00000584888 NEUROD6Q96NK8 337 aa21.99■■□□□ 1.11
ERBB2-221ENST00000584888 LDHBP07195 334 aaKnown RBP21.98■■□□□ 1.11
ERBB2-221ENST00000584888 CDC42EP5Q6NZY7 148 aa21.98■■□□□ 1.11
ERBB2-221ENST00000584888 BRI3BPQ8WY22 251 aa21.98■■□□□ 1.11
ERBB2-221ENST00000584888 OTUD5Q96G74 571 aa21.98■■□□□ 1.11
ERBB2-221ENST00000584888 WRNIP1Q96S55 665 aa21.98■■□□□ 1.11
ERBB2-221ENST00000584888 SPDYE5A6NIY4 337 aa21.97■■□□□ 1.11
ERBB2-221ENST00000584888 GTF2A2P52657 109 aa21.97■■□□□ 1.11
ERBB2-221ENST00000584888 TNNI3KQ59H18 835 aa21.97■■□□□ 1.11
ERBB2-221ENST00000584888 SIRT2Q8IXJ6 389 aa21.97■■□□□ 1.11
ERBB2-221ENST00000584888 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.97■■□□□ 1.11
ERBB2-221ENST00000584888 FAM151AQ8WW52 585 aa21.97■■□□□ 1.11
ERBB2-221ENST00000584888 TRIM17Q9Y577 477 aa21.97■■□□□ 1.11
ERBB2-221ENST00000584888 FPGT-TNNI3KV9GXZ4 949 aa21.97■■□□□ 1.11
ERBB2-221ENST00000584888 CCL15-CCL14A0A0B4J2E2 113 aa21.96■■□□□ 1.11
ERBB2-221ENST00000584888 ARID4AP29374 1257 aaPredicted RBP21.96■■□□□ 1.11
ERBB2-221ENST00000584888 CCL15Q16663 113 aa21.96■■□□□ 1.11
ERBB2-221ENST00000584888 DCAF15Q66K64 600 aa21.96■■□□□ 1.11
ERBB2-221ENST00000584888 MIGA2Q7L4E1 593 aa21.96■■□□□ 1.11
ERBB2-221ENST00000584888 RPAP2Q8IXW5 612 aaPredicted RBP21.96■■□□□ 1.11
ERBB2-221ENST00000584888 ZKSCAN4Q969J2 545 aaPredicted RBP21.96■■□□□ 1.11
ERBB2-221ENST00000584888 SNCAIPQ9Y6H5 919 aa21.96■■□□□ 1.11
ERBB2-221ENST00000584888 RPAP1Q9BWH6 1393 aaPredicted RBP21.96■■□□□ 1.11
ERBB2-221ENST00000584888 TCP10Q12799 353 aa21.95■■□□□ 1.1
ERBB2-221ENST00000584888 OTOP1Q7RTM1 612 aa21.95■■□□□ 1.1
ERBB2-221ENST00000584888 ERO1BQ86YB8 467 aa21.95■■□□□ 1.1
ERBB2-221ENST00000584888 ERO1AQ96HE7 468 aa21.95■■□□□ 1.1
ERBB2-221ENST00000584888 CHMP4BQ9H444 224 aaKnown RBP21.95■■□□□ 1.1
ERBB2-221ENST00000584888 USP40Q9NVE5 1235 aa21.95■■□□□ 1.1
ERBB2-221ENST00000584888 HMG20BQ9P0W2 317 aa21.95■■□□□ 1.1
ERBB2-221ENST00000584888 MYH2Q9UKX2 1941 aa21.95■■□□□ 1.1
ERBB2-221ENST00000584888 NFIAQ12857 509 aa21.94■■□□□ 1.1
ERBB2-221ENST00000584888 OS9Q13438 667 aaPredicted RBP21.94■■□□□ 1.1
ERBB2-221ENST00000584888 ZGPATQ8N5A5 531 aaKnown RBP21.94■■□□□ 1.1
ERBB2-221ENST00000584888 CD99L2Q8TCZ2 262 aa21.94■■□□□ 1.1
ERBB2-221ENST00000584888 ZNF341Q9BYN7 854 aa21.94■■□□□ 1.1
ERBB2-221ENST00000584888 SP3Q02447 781 aa21.93■■□□□ 1.1
ERBB2-221ENST00000584888 FAM43AQ8N2R8 423 aa21.93■■□□□ 1.1
ERBB2-221ENST00000584888 DBNDD2Q9BQY9 259 aa21.93■■□□□ 1.1
ERBB2-221ENST00000584888 FAM198AQ9UFP1 575 aa21.93■■□□□ 1.1
ERBB2-221ENST00000584888 IRF6O14896 467 aa21.92■■□□□ 1.1
ERBB2-221ENST00000584888 UQCRFS1P1P0C7P4 283 aa21.92■■□□□ 1.1
ERBB2-221ENST00000584888 MCAMP43121 646 aa21.92■■□□□ 1.1
ERBB2-221ENST00000584888 TAF1CQ15572 869 aaPredicted RBP21.92■■□□□ 1.1
ERBB2-221ENST00000584888 GORABQ5T7V8 394 aa21.92■■□□□ 1.1
ERBB2-221ENST00000584888 SPATA5Q8NB90 893 aa21.92■■□□□ 1.1
ERBB2-221ENST00000584888 EAF2Q96CJ1 260 aaPredicted RBP21.92■■□□□ 1.1
ERBB2-221ENST00000584888 FAM163AQ96GL9 167 aaPredicted RBP21.92■■□□□ 1.1
ERBB2-221ENST00000584888 ZNF512BQ96KM6 892 aaPredicted RBP21.92■■□□□ 1.1
ERBB2-221ENST00000584888 ZFYVE28Q9HCC9 887 aa21.92■■□□□ 1.1
ERBB2-221ENST00000584888 EXOC6BQ9Y2D4 811 aa21.92■■□□□ 1.1
ERBB2-221ENST00000584888 GAKO14976 1311 aa21.91■■□□□ 1.1
ERBB2-221ENST00000584888 CETPP11597 493 aa21.91■■□□□ 1.1
ERBB2-221ENST00000584888 INPP5BP32019 993 aa21.91■■□□□ 1.1
ERBB2-221ENST00000584888 PI16Q6UXB8 463 aa21.91■■□□□ 1.1
ERBB2-221ENST00000584888 ABCF2Q9UG63 623 aa21.91■■□□□ 1.1
ERBB2-221ENST00000584888 CAP1Q01518 475 aa21.9■■□□□ 1.1
ERBB2-221ENST00000584888 PPIL2Q13356 520 aa21.9■■□□□ 1.1
ERBB2-221ENST00000584888 SNAPC2Q13487 334 aa21.9■■□□□ 1.1
ERBB2-221ENST00000584888 SPTY2D1Q68D10 685 aaPredicted RBP21.9■■□□□ 1.1
ERBB2-221ENST00000584888 ZFPM1Q8IX07 1006 aa21.9■■□□□ 1.1
ERBB2-221ENST00000584888 ZNF384Q8TF68 577 aa21.9■■□□□ 1.1
ERBB2-221ENST00000584888 EFCC1Q9HA90 598 aa21.9■■□□□ 1.1
ERBB2-221ENST00000584888 ZNF112Q9UJU3 913 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms