RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 ZNF765Q7L2R6 523 aa5.86□□□□□ -1.47
VAPA-208ENST00000584796 C14orf37Q86TY3 774 aa5.86□□□□□ -1.47
VAPA-208ENST00000584796 GLIS3Q8NEA6 775 aa5.86□□□□□ -1.47
VAPA-208ENST00000584796 ALKBH8Q96BT7 664 aaKnown RBP5.86□□□□□ -1.47
VAPA-208ENST00000584796 C1GALT1Q9NS00 363 aa5.86□□□□□ -1.47
VAPA-208ENST00000584796 TMEM238LA0A1B0GVL6 79 aa5.85□□□□□ -1.47
VAPA-208ENST00000584796 BTBD11A6QL63 1104 aa5.85□□□□□ -1.47
VAPA-208ENST00000584796 DYNC1LI2O43237 492 aaPredicted RBP5.85□□□□□ -1.47
VAPA-208ENST00000584796 FAAP100Q0VG06 881 aa5.85□□□□□ -1.47
VAPA-208ENST00000584796 DUSP27Q5VZP5 1158 aa5.85□□□□□ -1.47
VAPA-208ENST00000584796 RBCK1Q9BYM8 510 aa5.85□□□□□ -1.47
VAPA-208ENST00000584796 NIF3L1Q9GZT8 377 aa5.85□□□□□ -1.47
VAPA-208ENST00000584796 PPP1R9AQ9ULJ8 1098 aa5.85□□□□□ -1.47
VAPA-208ENST00000584796 TRAK1Q9UPV9 953 aa5.85□□□□□ -1.47
VAPA-208ENST00000584796 GRM2Q14416 872 aa5.84□□□□□ -1.47
VAPA-208ENST00000584796 PDE3AQ14432 1141 aa5.84□□□□□ -1.47
VAPA-208ENST00000584796 COL19A1Q14993 1142 aa5.84□□□□□ -1.47
VAPA-208ENST00000584796 DMRTB1Q96MA1 342 aa5.84□□□□□ -1.47
VAPA-208ENST00000584796 ZC3H7BQ9UGR2 993 aaKnown RBP5.84□□□□□ -1.47
VAPA-208ENST00000584796 DAGLAQ9Y4D2 1042 aa5.84□□□□□ -1.47
VAPA-208ENST00000584796 TMPRSS2O15393 492 aa5.83□□□□□ -1.48
VAPA-208ENST00000584796 OGFOD3Q6PK18 319 aa5.83□□□□□ -1.48
VAPA-208ENST00000584796 WDR89Q96FK6 387 aaPredicted RBP5.83□□□□□ -1.48
VAPA-208ENST00000584796 CSRNP1Q96S65 589 aa5.83□□□□□ -1.48
VAPA-208ENST00000584796 CCDC86Q9H6F5 360 aaKnown RBP5.83□□□□□ -1.48
VAPA-208ENST00000584796 LRRC4CQ9HCJ2 640 aa5.83□□□□□ -1.48
VAPA-208ENST00000584796 PAK6Q9NQU5 681 aaPredicted RBP5.83□□□□□ -1.48
VAPA-208ENST00000584796 CRIM1Q9NZV1 1036 aa5.83□□□□□ -1.48
VAPA-208ENST00000584796 GADD45BO75293 160 aaPredicted RBP5.82□□□□□ -1.48
VAPA-208ENST00000584796 YBX3P16989 372 aaKnown RBP eCLIP5.82□□□□□ -1.484e-8■■□□□ 13.6
VAPA-208ENST00000584796 ITGB5P18084 799 aa5.82□□□□□ -1.48
VAPA-208ENST00000584796 KIF4BQ2VIQ3 1234 aa5.82□□□□□ -1.48
VAPA-208ENST00000584796 TP53INP2Q8IXH6 220 aa5.82□□□□□ -1.48
VAPA-208ENST00000584796 RETREG2Q8NC44 543 aa5.82□□□□□ -1.48
VAPA-208ENST00000584796 AGBL5Q8NDL9 886 aa5.82□□□□□ -1.48
VAPA-208ENST00000584796 FLCNQ8NFG4 579 aa5.82□□□□□ -1.48
VAPA-208ENST00000584796 EPS8L3Q8TE67 593 aaKnown RBP5.82□□□□□ -1.48
VAPA-208ENST00000584796 PCDHGC5Q9Y5F6 944 aa5.82□□□□□ -1.48
VAPA-208ENST00000584796 ZNF862O60290 1169 aa5.81□□□□□ -1.48
VAPA-208ENST00000584796 GSTP1P09211 210 aaKnown RBP5.81□□□□□ -1.48
VAPA-208ENST00000584796 LIG1P18858 919 aa5.81□□□□□ -1.48
VAPA-208ENST00000584796 ID3Q02535 119 aa5.81□□□□□ -1.48
VAPA-208ENST00000584796 WFDC3Q8IUB2 231 aa5.81□□□□□ -1.48
VAPA-208ENST00000584796 TMC1Q8TDI8 760 aa5.81□□□□□ -1.48
VAPA-208ENST00000584796 FANCD2OSQ96PS1 177 aa5.81□□□□□ -1.48
VAPA-208ENST00000584796 ATXN3LQ9H3M9 355 aa5.81□□□□□ -1.48
VAPA-208ENST00000584796 KRT82Q9NSB4 513 aa5.81□□□□□ -1.48
VAPA-208ENST00000584796 SOWAHDA6NJG2 315 aa5.8□□□□□ -1.48
VAPA-208ENST00000584796 SLFN14P0C7P3 912 aa5.8□□□□□ -1.48
VAPA-208ENST00000584796 ZNF157P51786 506 aaPredicted RBP5.8□□□□□ -1.48
VAPA-208ENST00000584796 PDZD3Q86UT5 571 aa5.8□□□□□ -1.48
VAPA-208ENST00000584796 CCER1Q8TC90 406 aaPredicted RBP5.8□□□□□ -1.48
VAPA-208ENST00000584796 BCL7CQ8WUZ0 217 aaPredicted RBP5.8□□□□□ -1.48
VAPA-208ENST00000584796 ZC3H12CQ9C0D7 883 aaKnown RBP5.8□□□□□ -1.48
VAPA-208ENST00000584796 DISC1Q9NRI5 854 aa5.8□□□□□ -1.48
VAPA-208ENST00000584796 XRCC5P13010 732 aaKnown RBP5.79□□□□□ -1.48
VAPA-208ENST00000584796 CYP27C1Q4G0S4 372 aa5.79□□□□□ -1.48
VAPA-208ENST00000584796 DTHD1Q6ZMT9 781 aa5.79□□□□□ -1.48
VAPA-208ENST00000584796 TMC7Q7Z402 723 aa5.79□□□□□ -1.48
VAPA-208ENST00000584796 PIDD1Q9HB75 910 aa5.79□□□□□ -1.48
VAPA-208ENST00000584796 LGR6Q9HBX8 967 aa5.79□□□□□ -1.48
VAPA-208ENST00000584796 TMEM39AQ9NV64 488 aa5.79□□□□□ -1.48
VAPA-208ENST00000584796 FAM87AP0C7U9 286 aa5.78□□□□□ -1.48
VAPA-208ENST00000584796 JUNBP17275 347 aaPredicted RBP5.78□□□□□ -1.48
VAPA-208ENST00000584796 FCGRTP55899 365 aa5.78□□□□□ -1.48
VAPA-208ENST00000584796 HNRNPUQ00839 825 aaKnown RBP eCLIP5.78□□□□□ -1.48
VAPA-208ENST00000584796 PPP2R3AQ06190 1150 aa5.78□□□□□ -1.48
VAPA-208ENST00000584796 PDE4CQ08493 712 aa5.78□□□□□ -1.48
VAPA-208ENST00000584796 CDK5R2Q13319 367 aa5.78□□□□□ -1.48
VAPA-208ENST00000584796 PI16Q6UXB8 463 aa5.78□□□□□ -1.48
VAPA-208ENST00000584796 SMYD4Q8IYR2 804 aaPredicted RBP5.78□□□□□ -1.48
VAPA-208ENST00000584796 STK11IPQ8N1F8 1099 aa5.78□□□□□ -1.48
VAPA-208ENST00000584796 ASIC4Q96FT7 647 aa5.78□□□□□ -1.48
VAPA-208ENST00000584796 GNEQ9Y223 722 aaKnown RBP5.78□□□□□ -1.48
VAPA-208ENST00000584796 SLC5A6Q9Y289 635 aa5.78□□□□□ -1.48
VAPA-208ENST00000584796 ARID1BQ8NFD5 2236 aaPredicted RBP5.78□□□□□ -1.48
VAPA-208ENST00000584796 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
VAPA-208ENST00000584796 DSC3Q14574 896 aa5.77□□□□□ -1.49
VAPA-208ENST00000584796 TTLL4Q14679 1199 aa5.77□□□□□ -1.49
VAPA-208ENST00000584796 OGFOD2Q6N063 350 aa5.77□□□□□ -1.49
VAPA-208ENST00000584796 ZNF574Q6ZN55 896 aaPredicted RBP5.77□□□□□ -1.49
VAPA-208ENST00000584796 SPRED2Q7Z698 418 aa5.77□□□□□ -1.49
VAPA-208ENST00000584796 STK35Q8TDR2 534 aa5.77□□□□□ -1.49
VAPA-208ENST00000584796 MISP3Q96FF7 219 aa5.77□□□□□ -1.49
VAPA-208ENST00000584796 BCO2Q9BYV7 579 aa5.77□□□□□ -1.49
VAPA-208ENST00000584796 NLRP2Q9NX02 1062 aa5.77□□□□□ -1.49
VAPA-208ENST00000584796 GPN3Q9UHW5 284 aaPredicted RBP5.77□□□□□ -1.49
VAPA-208ENST00000584796 DCTN4Q9UJW0 460 aa5.77□□□□□ -1.49
VAPA-208ENST00000584796 NEFMP07197 916 aa5.76□□□□□ -1.49
VAPA-208ENST00000584796 ZC3H12AQ5D1E8 599 aaKnown RBP5.76□□□□□ -1.49
VAPA-208ENST00000584796 SULF2Q8IWU5 870 aa5.76□□□□□ -1.49
VAPA-208ENST00000584796 PLD6Q8N2A8 252 aaKnown RBP5.76□□□□□ -1.49
VAPA-208ENST00000584796 NETO1Q8TDF5 533 aa5.76□□□□□ -1.49
VAPA-208ENST00000584796 PPP4R2Q9NY27 417 aa5.76□□□□□ -1.49
VAPA-208ENST00000584796 U3KQE9 123 aa5.76□□□□□ -1.49
VAPA-208ENST00000584796 TREHO43280 583 aa5.75□□□□□ -1.49
VAPA-208ENST00000584796 PAPLNO95428 1278 aa5.75□□□□□ -1.49
VAPA-208ENST00000584796 HCLS1P14317 486 aaPredicted RBP5.75□□□□□ -1.49
VAPA-208ENST00000584796 ARNTP27540 789 aa5.75□□□□□ -1.49
VAPA-208ENST00000584796 ZNF252P-AS1Q0IIN9 211 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms