RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 CCER2I3L3R5 266 aa12.93□□□□□ -0.34
GGA3-219ENST00000584550 INPP5BP32019 993 aa12.93□□□□□ -0.34
GGA3-219ENST00000584550 CHAF1AQ13111 956 aaPredicted RBP12.93□□□□□ -0.34
GGA3-219ENST00000584550 FKBP5Q13451 457 aaPredicted RBP12.93□□□□□ -0.34
GGA3-219ENST00000584550 LMBR1LQ6UX01 489 aa12.93□□□□□ -0.34
GGA3-219ENST00000584550 WWC1Q8IX03 1113 aa12.93□□□□□ -0.34
GGA3-219ENST00000584550 DEFB123Q8N688 67 aa12.93□□□□□ -0.34
GGA3-219ENST00000584550 FAM84BQ96KN1 310 aaPredicted RBP12.93□□□□□ -0.34
GGA3-219ENST00000584550 CYP2C8P10632 490 aa12.92□□□□□ -0.34
GGA3-219ENST00000584550 ELNP15502 786 aa12.92□□□□□ -0.34
GGA3-219ENST00000584550 FCGRTP55899 365 aa12.92□□□□□ -0.34
GGA3-219ENST00000584550 PPATQ06203 517 aa12.92□□□□□ -0.34
GGA3-219ENST00000584550 FLIIQ13045 1269 aa12.92□□□□□ -0.34
GGA3-219ENST00000584550 CCDC57Q2TAC2 916 aa12.92□□□□□ -0.34
GGA3-219ENST00000584550 EPHA10Q5JZY3 1008 aa12.92□□□□□ -0.34
GGA3-219ENST00000584550 ANKRD23Q86SG2 305 aa12.92□□□□□ -0.34
GGA3-219ENST00000584550 LINS1Q8NG48 757 aa12.92□□□□□ -0.34
GGA3-219ENST00000584550 DNAAF4Q8WXU2 420 aa12.92□□□□□ -0.34
GGA3-219ENST00000584550 DEFB118Q96PH6 123 aa12.92□□□□□ -0.34
GGA3-219ENST00000584550 ADGRA2Q96PE1 1338 aa12.91□□□□□ -0.34
GGA3-219ENST00000584550 MGAMO43451 1857 aa12.91□□□□□ -0.34
GGA3-219ENST00000584550 ADCY3O60266 1144 aa12.91□□□□□ -0.34
GGA3-219ENST00000584550 TWISTNBQ3B726 338 aaPredicted RBP12.91□□□□□ -0.34
GGA3-219ENST00000584550 SLAIN1Q8ND83 568 aa12.91□□□□□ -0.34
GGA3-219ENST00000584550 TEKT1Q969V4 418 aa12.91□□□□□ -0.34
GGA3-219ENST00000584550 PAWRQ96IZ0 340 aaKnown RBP12.91□□□□□ -0.34
GGA3-219ENST00000584550 ZNF341Q9BYN7 854 aa12.91□□□□□ -0.34
GGA3-219ENST00000584550 TMOD2Q9NZR1 351 aa12.91□□□□□ -0.34
GGA3-219ENST00000584550 TAOK2Q9UL54 1235 aa12.91□□□□□ -0.34
GGA3-219ENST00000584550 FRAT2O75474 233 aaPredicted RBP12.9□□□□□ -0.34
GGA3-219ENST00000584550 INHAP05111 366 aa12.9□□□□□ -0.34
GGA3-219ENST00000584550 CCDC27Q2M243 656 aa12.9□□□□□ -0.34
GGA3-219ENST00000584550 DCAF15Q66K64 600 aa12.9□□□□□ -0.34
GGA3-219ENST00000584550 VPS37DQ86XT2 251 aa12.9□□□□□ -0.34
GGA3-219ENST00000584550 PUS3Q9BZE2 481 aaKnown RBP12.9□□□□□ -0.34
GGA3-219ENST00000584550 ZMYND8Q9ULU4 1186 aaPredicted RBP12.9□□□□□ -0.34
GGA3-219ENST00000584550 F6X3S4 739 aa12.89□□□□□ -0.35
GGA3-219ENST00000584550 FLT3LGP49771 235 aa12.89□□□□□ -0.35
GGA3-219ENST00000584550 TCP10Q12799 353 aa12.89□□□□□ -0.35
GGA3-219ENST00000584550 MOGSQ13724 837 aa12.89□□□□□ -0.35
GGA3-219ENST00000584550 UBE4AQ14139 1066 aa12.89□□□□□ -0.35
GGA3-219ENST00000584550 FAM83AQ86UY5 434 aa12.89□□□□□ -0.35
GGA3-219ENST00000584550 C7orf61Q8IZ16 206 aa12.89□□□□□ -0.35
GGA3-219ENST00000584550 DIS3LQ8TF46 1054 aaKnown RBP12.89□□□□□ -0.35
GGA3-219ENST00000584550 HOOK2Q96ED9 719 aa12.89□□□□□ -0.35
GGA3-219ENST00000584550 COL25A1Q9BXS0 654 aaPredicted RBP12.89□□□□□ -0.35
GGA3-219ENST00000584550 ALPK3Q96L96 1907 aa12.89□□□□□ -0.35
GGA3-219ENST00000584550 AK9Q5TCS8 1911 aa12.88□□□□□ -0.35
GGA3-219ENST00000584550 BCRP11274 1271 aa12.88□□□□□ -0.35
GGA3-219ENST00000584550 SYN1P17600 705 aa12.88□□□□□ -0.35
GGA3-219ENST00000584550 BCAMP50895 628 aa12.88□□□□□ -0.35
GGA3-219ENST00000584550 APOBEC3HQ6NTF7 200 aaKnown RBP12.88□□□□□ -0.35
GGA3-219ENST00000584550 GPAT2Q6NUI2 795 aa12.88□□□□□ -0.35
GGA3-219ENST00000584550 ZDHHC15Q96MV8 337 aa12.88□□□□□ -0.35
GGA3-219ENST00000584550 PARK7Q99497 189 aaKnown RBP12.88□□□□□ -0.35
GGA3-219ENST00000584550 KCNH4Q9UQ05 1017 aa12.88□□□□□ -0.35
GGA3-219ENST00000584550 STXBP5LQ9Y2K9 1186 aa12.88□□□□□ -0.35
GGA3-219ENST00000584550 HDLBPQ00341 1268 aaKnown RBP12.87□□□□□ -0.35
GGA3-219ENST00000584550 GDF15Q99988 308 aa12.87□□□□□ -0.35
GGA3-219ENST00000584550 VCANP13611 3396 aa12.86□□□□□ -0.35
GGA3-219ENST00000584550 TNPO2O14787 897 aaKnown RBP12.86□□□□□ -0.35
GGA3-219ENST00000584550 BMP8BP34820 402 aa12.86□□□□□ -0.35
GGA3-219ENST00000584550 NECAB2Q7Z6G3 386 aa12.86□□□□□ -0.35
GGA3-219ENST00000584550 FBXO33Q7Z6M2 555 aa12.86□□□□□ -0.35
GGA3-219ENST00000584550 WDR63Q8IWG1 891 aa12.86□□□□□ -0.35
GGA3-219ENST00000584550 MTMR10Q9NXD2 777 aa12.86□□□□□ -0.35
GGA3-219ENST00000584550 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
GGA3-219ENST00000584550 CAVIN4Q5BKX8 364 aa12.85□□□□□ -0.35
GGA3-219ENST00000584550 BEND3Q5T5X7 828 aa12.85□□□□□ -0.35
GGA3-219ENST00000584550 FKBP1CQ5VVH2 108 aa12.85□□□□□ -0.35
GGA3-219ENST00000584550 GPR153Q6NV75 609 aa12.85□□□□□ -0.35
GGA3-219ENST00000584550 GADL1Q6ZQY3 521 aa12.85□□□□□ -0.35
GGA3-219ENST00000584550 TBC1D22AQ8WUA7 517 aa12.85□□□□□ -0.35
GGA3-219ENST00000584550 PAK6Q9NQU5 681 aaPredicted RBP12.85□□□□□ -0.35
GGA3-219ENST00000584550 ZNF112Q9UJU3 913 aa12.85□□□□□ -0.35
GGA3-219ENST00000584550 IL16Q14005 1332 aa12.85□□□□□ -0.35
GGA3-219ENST00000584550 GRM8O00222 908 aa12.84□□□□□ -0.35
GGA3-219ENST00000584550 MAGEA10P43363 369 aaPredicted RBP12.84□□□□□ -0.35
GGA3-219ENST00000584550 NFIAQ12857 509 aa12.84□□□□□ -0.35
GGA3-219ENST00000584550 PXYLP1Q8TE99 480 aa12.84□□□□□ -0.35
GGA3-219ENST00000584550 FAM151AQ8WW52 585 aa12.84□□□□□ -0.35
GGA3-219ENST00000584550 CRISPLD2Q9H0B8 497 aa12.84□□□□□ -0.35
GGA3-219ENST00000584550 C9orf78Q9NZ63 289 aaPredicted RBP12.84□□□□□ -0.35
GGA3-219ENST00000584550 ZHX2Q9Y6X8 837 aa12.84□□□□□ -0.35
GGA3-219ENST00000584550 EYSQ5T1H1 3165 aa12.84□□□□□ -0.35
GGA3-219ENST00000584550 LAMA2P24043 3122 aaKnown RBP12.83□□□□□ -0.36
GGA3-219ENST00000584550 LRIT3Q3SXY7 679 aa12.83□□□□□ -0.36
GGA3-219ENST00000584550 LRRC24Q50LG9 513 aa12.83□□□□□ -0.36
GGA3-219ENST00000584550 METTL24Q5JXM2 366 aa12.83□□□□□ -0.36
GGA3-219ENST00000584550 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.83□□□□□ -0.36
GGA3-219ENST00000584550 ZFPM1Q8IX07 1006 aa12.83□□□□□ -0.36
GGA3-219ENST00000584550 TDHQ8IZJ6 230 aa12.83□□□□□ -0.36
GGA3-219ENST00000584550 ANKRD13CQ8N6S4 541 aa12.83□□□□□ -0.36
GGA3-219ENST00000584550 SMCR8Q8TEV9 937 aaPredicted RBP12.83□□□□□ -0.36
GGA3-219ENST00000584550 MRIQ9BWK5 157 aa12.83□□□□□ -0.36
GGA3-219ENST00000584550 UBE2OQ9C0C9 1292 aaKnown RBP12.83□□□□□ -0.36
GGA3-219ENST00000584550 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.83□□□□□ -0.36
GGA3-219ENST00000584550 SPINK5Q9NQ38 1064 aaPredicted RBP12.83□□□□□ -0.36
GGA3-219ENST00000584550 MROH5Q6ZUA9 1318 aa12.83□□□□□ -0.36
GGA3-219ENST00000584550 FANCIQ9NVI1 1328 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms