RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 TNRC18O15417 2968 aaPredicted RBP6.87□□□□□ -1.31
VAPA-207ENST00000583879 TLL1O43897 1013 aa6.87□□□□□ -1.31
VAPA-207ENST00000583879 FKTNO75072 461 aa6.87□□□□□ -1.31
VAPA-207ENST00000583879 DDX58O95786 925 aaKnown RBP6.87□□□□□ -1.31
VAPA-207ENST00000583879 ALDH1A1P00352 501 aa6.87□□□□□ -1.31
VAPA-207ENST00000583879 ZNF853P0CG23 659 aa6.87□□□□□ -1.31
VAPA-207ENST00000583879 CCT4P50991 539 aaKnown RBP6.87□□□□□ -1.31
VAPA-207ENST00000583879 INHBEP58166 350 aa6.87□□□□□ -1.31
VAPA-207ENST00000583879 WDR43Q15061 677 aaKnown RBP eCLIP6.87□□□□□ -1.31
VAPA-207ENST00000583879 LDLRAD1Q5T700 205 aa6.87□□□□□ -1.31
VAPA-207ENST00000583879 ZNF697Q5TEC3 545 aa6.87□□□□□ -1.31
VAPA-207ENST00000583879 TTLL5Q6EMB2 1281 aa6.87□□□□□ -1.31
VAPA-207ENST00000583879 ARMC9Q7Z3E5 817 aa6.87□□□□□ -1.31
VAPA-207ENST00000583879 TTLL11Q8NHH1 800 aa6.87□□□□□ -1.31
VAPA-207ENST00000583879 CDC5LQ99459 802 aaKnown RBP6.87□□□□□ -1.31
VAPA-207ENST00000583879 COA1Q9GZY4 146 aa6.87□□□□□ -1.31
VAPA-207ENST00000583879 R3HDMLQ9H3Y0 253 aa6.87□□□□□ -1.31
VAPA-207ENST00000583879 LRRC37AA6NMS7 1700 aa6.87□□□□□ -1.31
VAPA-207ENST00000583879 COL4A1P02462 1669 aa6.87□□□□□ -1.31
VAPA-207ENST00000583879 MYO3BQ8WXR4 1341 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 FAM187AA6NFU0 413 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 S1PR4O95977 384 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 DNAJB2P25686 324 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 CTSWP56202 376 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 GNAI1P63096 354 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 PRKG1Q13976 671 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 KMT5BQ4FZB7 885 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 INTS3Q68E01 1043 aaKnown RBP6.86□□□□□ -1.31
VAPA-207ENST00000583879 TXNRD3Q86VQ6 643 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 C8orf58Q8NAV2 365 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 GCC1Q96CN9 775 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 SLC10A4Q96EP9 437 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 CHMP4AQ9BY43 222 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 GREM2Q9H772 168 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 IFT57Q9NWB7 429 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 MAP3K2Q9Y2U5 619 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 LEMD3Q9Y2U8 911 aa6.86□□□□□ -1.31
VAPA-207ENST00000583879 TAF1P21675 1872 aa6.85□□□□□ -1.31
VAPA-207ENST00000583879 LAMB2P55268 1798 aa6.85□□□□□ -1.31
VAPA-207ENST00000583879 MED23Q9ULK4 1368 aa6.85□□□□□ -1.31
VAPA-207ENST00000583879 MYBBP1AQ9BQG0 1328 aaKnown RBP6.85□□□□□ -1.31
VAPA-207ENST00000583879 MANSC4A6NHS7 340 aaPredicted RBP6.85□□□□□ -1.31
VAPA-207ENST00000583879 H7C1W4 665 aa6.85□□□□□ -1.31
VAPA-207ENST00000583879 TNFRSF10AO00220 468 aa6.85□□□□□ -1.31
VAPA-207ENST00000583879 ACTN4O43707 911 aaKnown RBP6.85□□□□□ -1.31
VAPA-207ENST00000583879 SASH1O94885 1247 aa6.85□□□□□ -1.31
VAPA-207ENST00000583879 IGKV5-2P06315 115 aa6.85□□□□□ -1.31
VAPA-207ENST00000583879 CALD1Q05682 793 aaKnown RBP6.85□□□□□ -1.31
VAPA-207ENST00000583879 MAP3K11Q16584 847 aa6.85□□□□□ -1.31
VAPA-207ENST00000583879 CCDC30Q5VVM6 783 aa6.85□□□□□ -1.31
VAPA-207ENST00000583879 KSR2Q6VAB6 950 aa6.85□□□□□ -1.31
VAPA-207ENST00000583879 APOBEC3FQ8IUX4 373 aaKnown RBP6.85□□□□□ -1.31
VAPA-207ENST00000583879 KIAA0825Q8IV33 1275 aa6.85□□□□□ -1.31
VAPA-207ENST00000583879 ZBED3Q96IU2 234 aaPredicted RBP6.85□□□□□ -1.31
VAPA-207ENST00000583879 DEFB129Q9H1M3 183 aa6.85□□□□□ -1.31
VAPA-207ENST00000583879 ANGEL1Q9UNK9 670 aaKnown RBP6.85□□□□□ -1.31
VAPA-207ENST00000583879 ZNF804BA4D1E1 1349 aa6.84□□□□□ -1.31
VAPA-207ENST00000583879 PI4KAP2A4QPH2 592 aa6.84□□□□□ -1.31
VAPA-207ENST00000583879 UNCXA6NJT0 531 aa6.84□□□□□ -1.31
VAPA-207ENST00000583879 APAF1O14727 1248 aa6.84□□□□□ -1.31
VAPA-207ENST00000583879 PPP1R12BO60237 982 aaPredicted RBP6.84□□□□□ -1.31
VAPA-207ENST00000583879 ZBTB48P10074 688 aaPredicted RBP6.84□□□□□ -1.31
VAPA-207ENST00000583879 IGHMBP2P38935 993 aaKnown RBP6.84□□□□□ -1.31
VAPA-207ENST00000583879 GTF2IP78347 998 aa6.84□□□□□ -1.31
VAPA-207ENST00000583879 NEXNQ0ZGT2 675 aa6.84□□□□□ -1.31
VAPA-207ENST00000583879 DLGAP5Q15398 846 aa6.84□□□□□ -1.31
VAPA-207ENST00000583879 HABP4Q5JVS0 413 aaKnown RBP6.84□□□□□ -1.31
VAPA-207ENST00000583879 LIAT1Q6ZQX7 453 aa6.84□□□□□ -1.31
VAPA-207ENST00000583879 PI4KAP1Q8N8J0 262 aa6.84□□□□□ -1.31
VAPA-207ENST00000583879 ANKRD2Q9GZV1 360 aa6.84□□□□□ -1.31
VAPA-207ENST00000583879 FZD1Q9UP38 647 aa6.84□□□□□ -1.31
VAPA-207ENST00000583879 TRIM17Q9Y577 477 aa6.84□□□□□ -1.31
VAPA-207ENST00000583879 GTF3C3Q9Y5Q9 886 aa6.84□□□□□ -1.31
VAPA-207ENST00000583879 PAPPA2Q9BXP8 1791 aa6.84□□□□□ -1.31
VAPA-207ENST00000583879 DDX60Q8IY21 1712 aaKnown RBP6.84□□□□□ -1.31
VAPA-207ENST00000583879 POLR2AP24928 1970 aaKnown RBP6.84□□□□□ -1.32
VAPA-207ENST00000583879 NEURL1BA8MQ27 555 aa6.83□□□□□ -1.32
VAPA-207ENST00000583879 GDF9O60383 454 aa6.83□□□□□ -1.32
VAPA-207ENST00000583879 CSF1RP07333 972 aa6.83□□□□□ -1.32
VAPA-207ENST00000583879 DDX10Q13206 875 aaKnown RBP6.83□□□□□ -1.32
VAPA-207ENST00000583879 CWF19L2Q2TBE0 894 aaKnown RBP6.83□□□□□ -1.32
VAPA-207ENST00000583879 SUPT20HL1Q3ZLR7 823 aa6.83□□□□□ -1.32
VAPA-207ENST00000583879 OTUD7BQ6GQQ9 843 aa6.83□□□□□ -1.32
VAPA-207ENST00000583879 OTOP1Q7RTM1 612 aa6.83□□□□□ -1.32
VAPA-207ENST00000583879 TSPYL6Q8N831 410 aa6.83□□□□□ -1.32
VAPA-207ENST00000583879 MTMR14Q8NCE2 650 aa6.83□□□□□ -1.32
VAPA-207ENST00000583879 MPHOSPH8Q99549 860 aa6.83□□□□□ -1.32
VAPA-207ENST00000583879 TMEM134Q9H6X4 195 aa6.83□□□□□ -1.32
VAPA-207ENST00000583879 CD209Q9NNX6 404 aa6.83□□□□□ -1.32
VAPA-207ENST00000583879 PTPN22Q9Y2R2 807 aa6.83□□□□□ -1.32
VAPA-207ENST00000583879 PPP2R3BQ9Y5P8 575 aa6.83□□□□□ -1.32
VAPA-207ENST00000583879 SCN9AQ15858 1988 aa6.82□□□□□ -1.32
VAPA-207ENST00000583879 TESPA1A2RU30 521 aaPredicted RBP6.82□□□□□ -1.32
VAPA-207ENST00000583879 IGF2BP3O00425 579 aaKnown RBP eCLIP6.82□□□□□ -1.32
VAPA-207ENST00000583879 MYO1BO43795 1136 aa6.82□□□□□ -1.32
VAPA-207ENST00000583879 NR1I2O75469 434 aa6.82□□□□□ -1.32
VAPA-207ENST00000583879 USP2O75604 605 aaPredicted RBP6.82□□□□□ -1.32
VAPA-207ENST00000583879 ADH1BP00325 375 aa6.82□□□□□ -1.32
VAPA-207ENST00000583879 CFHP08603 1231 aa6.82□□□□□ -1.32
VAPA-207ENST00000583879 ITGA6P23229 1130 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms