RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 ZNF384Q8TF68 577 aa29.69■■■□□ 2.34
MIR3960-201ENST00000583311 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.69■■■□□ 2.34
MIR3960-201ENST00000583311 DEFB129Q9H1M3 183 aa29.69■■■□□ 2.34
MIR3960-201ENST00000583311 USP40Q9NVE5 1235 aa29.69■■■□□ 2.34
MIR3960-201ENST00000583311 STAP2Q9UGK3 403 aa29.69■■■□□ 2.34
MIR3960-201ENST00000583311 POLR2AP24928 1970 aaKnown RBP29.69■■■□□ 2.34
MIR3960-201ENST00000583311 AOX1Q06278 1338 aa29.69■■■□□ 2.34
MIR3960-201ENST00000583311 BAG3O95817 575 aa29.68■■■□□ 2.34
MIR3960-201ENST00000583311 PI4K2BQ8TCG2 481 aa29.68■■■□□ 2.34
MIR3960-201ENST00000583311 CDCA5Q96FF9 252 aa29.68■■■□□ 2.34
MIR3960-201ENST00000583311 PDE1AP54750 535 aa29.67■■■□□ 2.34
MIR3960-201ENST00000583311 CDC42EP5Q6NZY7 148 aa29.67■■■□□ 2.34
MIR3960-201ENST00000583311 CERS3Q8IU89 383 aa29.67■■■□□ 2.34
MIR3960-201ENST00000583311 MAGEB6Q8N7X4 407 aa29.67■■■□□ 2.34
MIR3960-201ENST00000583311 TMEM88BA6NKF7 163 aa29.66■■■□□ 2.34
MIR3960-201ENST00000583311 CELF2O95319 508 aaKnown RBP29.66■■■□□ 2.34
MIR3960-201ENST00000583311 PLCG2P16885 1265 aa29.66■■■□□ 2.34
MIR3960-201ENST00000583311 CYP7A1P22680 504 aa29.66■■■□□ 2.34
MIR3960-201ENST00000583311 NF2P35240 595 aa29.66■■■□□ 2.34
MIR3960-201ENST00000583311 ZSCAN25Q6NSZ9 544 aa29.66■■■□□ 2.34
MIR3960-201ENST00000583311 EDC3Q96F86 508 aaKnown RBP29.66■■■□□ 2.34
MIR3960-201ENST00000583311 ZNF408Q9H9D4 720 aa29.66■■■□□ 2.34
MIR3960-201ENST00000583311 SCAF8Q9UPN6 1271 aaKnown RBP29.66■■■□□ 2.34
MIR3960-201ENST00000583311 TCP10L2B9ZVM9 353 aa29.65■■■□□ 2.34
MIR3960-201ENST00000583311 RASA3Q14644 834 aa29.65■■■□□ 2.34
MIR3960-201ENST00000583311 SLC9C2Q5TAH2 1124 aa29.65■■■□□ 2.34
MIR3960-201ENST00000583311 CENPQQ7L2Z9 268 aaPredicted RBP29.65■■■□□ 2.34
MIR3960-201ENST00000583311 FAM83AQ86UY5 434 aa29.65■■■□□ 2.34
MIR3960-201ENST00000583311 CCDC136Q96JN2 1154 aa29.65■■■□□ 2.34
MIR3960-201ENST00000583311 TRPM7Q96QT4 1865 aa29.65■■■□□ 2.34
MIR3960-201ENST00000583311 MYO5AQ9Y4I1 1855 aaKnown RBP29.64■■■□□ 2.34
MIR3960-201ENST00000583311 LRRFIP1Q32MZ4 808 aaKnown RBP29.64■■■□□ 2.34
MIR3960-201ENST00000583311 CREBZFQ9NS37 354 aa29.64■■■□□ 2.34
MIR3960-201ENST00000583311 FMR1Q06787 632 aaKnown RBP eCLIP29.63■■■□□ 2.33
MIR3960-201ENST00000583311 PDE6AP16499 860 aa29.62■■■□□ 2.33
MIR3960-201ENST00000583311 CACNB3P54284 484 aa29.62■■■□□ 2.33
MIR3960-201ENST00000583311 PPP4CP60510 307 aa29.62■■■□□ 2.33
MIR3960-201ENST00000583311 SUPT20HL1Q3ZLR7 823 aa29.62■■■□□ 2.33
MIR3960-201ENST00000583311 KBTBD3Q8NAB2 608 aa29.62■■■□□ 2.33
MIR3960-201ENST00000583311 OSBPL3Q9H4L5 887 aa29.62■■■□□ 2.33
MIR3960-201ENST00000583311 CST9Q5W186 159 aa29.61■■■□□ 2.33
MIR3960-201ENST00000583311 DLK2Q6UY11 383 aa29.61■■■□□ 2.33
MIR3960-201ENST00000583311 IDI2Q9BXS1 227 aa29.61■■■□□ 2.33
MIR3960-201ENST00000583311 AATFQ9NY61 560 aaKnown RBP eCLIP29.61■■■□□ 2.33
MIR3960-201ENST00000583311 PLEKHM2Q8IWE5 1019 aa29.6■■■□□ 2.33
MIR3960-201ENST00000583311 C2orf69Q8N8R5 385 aa29.6■■■□□ 2.33
MIR3960-201ENST00000583311 ADD2P35612 726 aa29.59■■■□□ 2.33
MIR3960-201ENST00000583311 RHBDL3P58872 404 aa29.59■■■□□ 2.33
MIR3960-201ENST00000583311 PRAMEF18Q5VWM3 479 aa29.59■■■□□ 2.33
MIR3960-201ENST00000583311 ADGRA1Q86SQ6 560 aa29.59■■■□□ 2.33
MIR3960-201ENST00000583311 FAM151AQ8WW52 585 aa29.59■■■□□ 2.33
MIR3960-201ENST00000583311 ZNF532Q9HCE3 1301 aa29.59■■■□□ 2.33
MIR3960-201ENST00000583311 ENTPD3O75355 529 aa29.58■■■□□ 2.33
MIR3960-201ENST00000583311 ZFYP08048 801 aaPredicted RBP29.58■■■□□ 2.33
MIR3960-201ENST00000583311 FKBP1BP68106 108 aa29.58■■■□□ 2.33
MIR3960-201ENST00000583311 UBE3CQ15386 1083 aa29.58■■■□□ 2.33
MIR3960-201ENST00000583311 TEX11Q8IYF3 940 aa29.58■■■□□ 2.33
MIR3960-201ENST00000583311 HOOK2Q96ED9 719 aa29.58■■■□□ 2.33
MIR3960-201ENST00000583311 RPAP1Q9BWH6 1393 aaPredicted RBP29.58■■■□□ 2.33
MIR3960-201ENST00000583311 GBA2Q9HCG7 927 aaPredicted RBP29.58■■■□□ 2.33
MIR3960-201ENST00000583311 ABT1Q9ULW3 272 aaKnown RBP29.58■■■□□ 2.33
MIR3960-201ENST00000583311 CNTNAP1P78357 1384 aa29.57■■■□□ 2.32
MIR3960-201ENST00000583311 NPM3O75607 178 aaKnown RBP29.57■■■□□ 2.32
MIR3960-201ENST00000583311 NFIAQ12857 509 aa29.57■■■□□ 2.32
MIR3960-201ENST00000583311 EVI5LQ96CN4 794 aa29.57■■■□□ 2.32
MIR3960-201ENST00000583311 TMEM39BQ9GZU3 492 aa29.57■■■□□ 2.32
MIR3960-201ENST00000583311 WDHD1O75717 1129 aaPredicted RBP29.56■■■□□ 2.32
MIR3960-201ENST00000583311 RGS3P49796 1198 aa29.56■■■□□ 2.32
MIR3960-201ENST00000583311 MIGA1Q8NAN2 632 aa29.56■■■□□ 2.32
MIR3960-201ENST00000583311 SH3RF3Q8TEJ3 882 aaPredicted RBP29.56■■■□□ 2.32
MIR3960-201ENST00000583311 FSD1Q9BTV5 496 aa29.56■■■□□ 2.32
MIR3960-201ENST00000583311 FAM198AQ9UFP1 575 aa29.56■■■□□ 2.32
MIR3960-201ENST00000583311 RFX7Q2KHR2 1363 aa29.55■■■□□ 2.32
MIR3960-201ENST00000583311 MAGEB6P1A0A0J9YX57 407 aa29.55■■■□□ 2.32
MIR3960-201ENST00000583311 TCRBV5S4A2TA0A5A2 114 aa29.55■■■□□ 2.32
MIR3960-201ENST00000583311 TCP10Q12799 353 aa29.55■■■□□ 2.32
MIR3960-201ENST00000583311 MYH7P12883 1935 aa29.55■■■□□ 2.32
MIR3960-201ENST00000583311 PICALMQ13492 652 aa29.54■■■□□ 2.32
MIR3960-201ENST00000583311 TTLL12Q14166 644 aaPredicted RBP29.54■■■□□ 2.32
MIR3960-201ENST00000583311 NBPF12Q5TAG4 269 aaPredicted RBP29.54■■■□□ 2.32
MIR3960-201ENST00000583311 TEPSINQ96N21 525 aa29.54■■■□□ 2.32
MIR3960-201ENST00000583311 PPP4R2Q9NY27 417 aa29.54■■■□□ 2.32
MIR3960-201ENST00000583311 TLL2Q9Y6L7 1015 aa29.54■■■□□ 2.32
MIR3960-201ENST00000583311 PPP1R12BO60237 982 aaPredicted RBP29.53■■■□□ 2.32
MIR3960-201ENST00000583311 PDE4AP27815 886 aa29.53■■■□□ 2.32
MIR3960-201ENST00000583311 ARMC9Q7Z3E5 817 aa29.53■■■□□ 2.32
MIR3960-201ENST00000583311 TICAM2Q86XR7 235 aa29.53■■■□□ 2.32
MIR3960-201ENST00000583311 PAPPA2Q9BXP8 1791 aa29.53■■■□□ 2.32
MIR3960-201ENST00000583311 TRIM6-TRIM34B2RNG4 842 aa29.52■■■□□ 2.32
MIR3960-201ENST00000583311 RNF113AO15541 343 aaKnown RBP29.52■■■□□ 2.32
MIR3960-201ENST00000583311 DYNLL1P63167 89 aaKnown RBP29.52■■■□□ 2.32
MIR3960-201ENST00000583311 SAPCD2Q86UD0 394 aa29.51■■■□□ 2.31
MIR3960-201ENST00000583311 ZSCAN29Q8IWY8 852 aaPredicted RBP29.51■■■□□ 2.31
MIR3960-201ENST00000583311 HHIPL1Q96JK4 782 aa29.51■■■□□ 2.31
MIR3960-201ENST00000583311 USP5P45974 858 aa29.5■■■□□ 2.31
MIR3960-201ENST00000583311 TGFBRAP1Q8WUH2 860 aa29.5■■■□□ 2.31
MIR3960-201ENST00000583311 APPBP2Q92624 585 aa29.5■■■□□ 2.31
MIR3960-201ENST00000583311 RIOK1Q9BRS2 568 aaKnown RBP29.5■■■□□ 2.31
MIR3960-201ENST00000583311 CRNKL1Q9BZJ0 848 aaKnown RBP29.5■■■□□ 2.31
MIR3960-201ENST00000583311 DDX4Q9NQI0 724 aaKnown RBP29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms