RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 TBC1D8O95759 1140 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 PFKFB1P16118 471 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-214ENST00000582981 SYNE3Q6ZMZ3 975 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 ATG3Q9NT62 314 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 KIAA1468Q9P260 1216 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 IDH1O75874 414 aaKnown RBP12.09□□□□□ -0.47
TOP3A-214ENST00000582981 SFPQP23246 707 aaKnown RBP eCLIP12.09□□□□□ -0.47
TOP3A-214ENST00000582981 ACTN2P35609 894 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 CASP7P55210 303 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 MCM6Q14566 821 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 MYSM1Q5VVJ2 828 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 RALYLQ86SE5 291 aaKnown RBP12.09□□□□□ -0.47
TOP3A-214ENST00000582981 REXO1L1PQ8IX06 675 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 PDILTQ8N807 584 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 ZSWIM4Q9H7M6 989 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 CDC25BP30305 580 aa12.08□□□□□ -0.48
TOP3A-214ENST00000582981 MMP14P50281 582 aa12.08□□□□□ -0.48
TOP3A-214ENST00000582981 ANTXR2P58335 489 aa12.08□□□□□ -0.48
TOP3A-214ENST00000582981 RABL6Q3YEC7 729 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-214ENST00000582981 ARFGAP3Q9NP61 516 aa12.08□□□□□ -0.48
TOP3A-214ENST00000582981 JCADQ9P266 1359 aa12.08□□□□□ -0.48
TOP3A-214ENST00000582981 GOLGB1Q14789 3259 aaKnown RBP12.08□□□□□ -0.48
TOP3A-214ENST00000582981 NRDCO43847 1150 aa12.08□□□□□ -0.48
TOP3A-214ENST00000582981 COBLO75128 1261 aa12.08□□□□□ -0.48
TOP3A-214ENST00000582981 CFAP100Q494V2 611 aa12.08□□□□□ -0.48
TOP3A-214ENST00000582981 TRMT44Q8IYL2 757 aaKnown RBP12.08□□□□□ -0.48
TOP3A-214ENST00000582981 GRAMD1CQ8IYS0 662 aa12.08□□□□□ -0.48
TOP3A-214ENST00000582981 XAGE2Q96GT9 111 aa12.08□□□□□ -0.48
TOP3A-214ENST00000582981 ZKSCAN3Q9BRR0 538 aa12.08□□□□□ -0.48
TOP3A-214ENST00000582981 DNAJC5Q9H3Z4 198 aa12.08□□□□□ -0.48
TOP3A-214ENST00000582981 CWC25Q9NXE8 425 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-214ENST00000582981 CEP126Q9P2H0 1117 aa12.08□□□□□ -0.48
TOP3A-214ENST00000582981 N4BP2Q86UW6 1770 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-214ENST00000582981 ARHGAP23Q9P227 1491 aa12.08□□□□□ -0.48
TOP3A-214ENST00000582981 EYA2O00167 538 aa12.07□□□□□ -0.48
TOP3A-214ENST00000582981 SERPINC1P01008 464 aa12.07□□□□□ -0.48
TOP3A-214ENST00000582981 RRP12Q5JTH9 1297 aaKnown RBP12.07□□□□□ -0.48
TOP3A-214ENST00000582981 SH3TC1Q8TE82 1336 aa12.07□□□□□ -0.48
TOP3A-214ENST00000582981 B4E1Z4 1266 aa12.07□□□□□ -0.48
TOP3A-214ENST00000582981 EIF3CLB5ME19 914 aaKnown RBP12.07□□□□□ -0.48
TOP3A-214ENST00000582981 PHACTR2O75167 634 aa12.07□□□□□ -0.48
TOP3A-214ENST00000582981 CC2D1AQ6P1N0 951 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-214ENST00000582981 EIF3CQ99613 913 aaKnown RBP12.07□□□□□ -0.48
TOP3A-214ENST00000582981 UTP14AQ9BVJ6 771 aaKnown RBP12.07□□□□□ -0.48
TOP3A-214ENST00000582981 ALDH8A1Q9H2A2 487 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-214ENST00000582981 BRMS1Q9HCU9 246 aa12.07□□□□□ -0.48
TOP3A-214ENST00000582981 HPS5Q9UPZ3 1129 aa12.07□□□□□ -0.48
TOP3A-214ENST00000582981 SARM1Q6SZW1 724 aa12.07□□□□□ -0.48
TOP3A-214ENST00000582981 PLBD2Q8NHP8 589 aa12.07□□□□□ -0.48
TOP3A-214ENST00000582981 SALL1Q9NSC2 1324 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 GPAA1O43292 621 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 FANCCQ00597 558 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 GRIN1Q05586 938 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 CCDC93Q567U6 631 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 ADALQ6DHV7 355 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 DSCC1Q9BVC3 393 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 KCNG1Q9UIX4 513 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 NEDD4P46934 1319 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 hCG_1642624A0A1W2PR95 340 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 FANCGO15287 622 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 CTAGE5O15320 804 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 MAGEA9P43362 315 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 IMMTQ16891 758 aaKnown RBP12.06□□□□□ -0.48
TOP3A-214ENST00000582981 CCDC57Q2TAC2 916 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 LLPHQ9BRT6 129 aaKnown RBP12.06□□□□□ -0.48
TOP3A-214ENST00000582981 STRN4Q9NRL3 753 aa12.06□□□□□ -0.48
TOP3A-214ENST00000582981 SLIT1O75093 1534 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 H3BQF6 201 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 HMGB1P09429 215 aaKnown RBP12.05□□□□□ -0.48
TOP3A-214ENST00000582981 GSDMDP57764 484 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 ETF1P62495 437 aaKnown RBP12.05□□□□□ -0.48
TOP3A-214ENST00000582981 NFXL1Q6ZNB6 911 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 CYB5R4Q7L1T6 521 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 TBC1D10CQ8IV04 446 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 DESI2Q9BSY9 194 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 ALG1Q9BT22 464 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 NAT10Q9H0A0 1025 aaKnown RBP12.05□□□□□ -0.48
TOP3A-214ENST00000582981 HELLSQ9NRZ9 838 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 C5P01031 1676 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 CASP1P29466 404 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 CDC27P30260 824 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 IL15P40933 162 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-214ENST00000582981 ANO1Q5XXA6 986 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 VPS37DQ86XT2 251 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 EXOC4Q96A65 974 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 RGPD5Q99666 1765 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 ZNF213O14771 459 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 TADA3O75528 432 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 SYKP43405 635 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 KIF23Q02241 960 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-214ENST00000582981 NCAPHQ15003 741 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 RTEL1Q9NZ71 1219 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 KCNJ14Q9UNX9 436 aa12.05□□□□□ -0.48
TOP3A-214ENST00000582981 PLEKHG2Q9H7P9 1386 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 PATL2C9JE40 543 aaKnown RBP12.04□□□□□ -0.48
TOP3A-214ENST00000582981 IVLP07476 585 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 UBASH3AP57075 661 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 FAM212AQ96EL1 285 aa12.04□□□□□ -0.48
TOP3A-214ENST00000582981 FANCLQ9NW38 375 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms