RNA–Protein interactions for RNA: ENST00000582565.1

NCOR1-222, Transcript of nuclear receptor corepressor 1, human

TSL 4

Gene NCOR1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-222	ENST00000582565	LDHD	Q86WU2	507 aa		13.76	□□□□□ -0.21
NCOR1-222	ENST00000582565	SYNE4	Q8N205	404 aa		13.76	□□□□□ -0.21
NCOR1-222	ENST00000582565	NGEF	Q8N5V2	710 aa		13.76	□□□□□ -0.21
NCOR1-222	ENST00000582565	ITPKC	Q96DU7	683 aa		13.76	□□□□□ -0.21
NCOR1-222	ENST00000582565	IQCA1L	A6NCM1	817 aa		13.75	□□□□□ -0.21
NCOR1-222	ENST00000582565	FZD9	O00144	591 aa		13.75	□□□□□ -0.21
NCOR1-222	ENST00000582565	LZTS3	O60299	673 aa	Predicted RBP	13.75	□□□□□ -0.21
NCOR1-222	ENST00000582565	DGAT1	O75907	488 aa		13.75	□□□□□ -0.21
NCOR1-222	ENST00000582565	RFX1	P22670	979 aa		13.75	□□□□□ -0.21
NCOR1-222	ENST00000582565	RTKN2	Q8IZC4	609 aa		13.75	□□□□□ -0.21
NCOR1-222	ENST00000582565	CNTNAP1	P78357	1384 aa		13.74	□□□□□ -0.21
NCOR1-222	ENST00000582565	MAP3K15	Q6ZN16	1313 aa		13.74	□□□□□ -0.21
NCOR1-222	ENST00000582565	UBN2	Q6ZU65	1347 aa		13.74	□□□□□ -0.21
NCOR1-222	ENST00000582565	ERVV-1	B6SEH8	477 aa		13.74	□□□□□ -0.21
NCOR1-222	ENST00000582565	TIMP2	P16035	220 aa		13.74	□□□□□ -0.21
NCOR1-222	ENST00000582565	IARS	P41252	1262 aa	Known RBP	13.74	□□□□□ -0.21
NCOR1-222	ENST00000582565	SCTR	P47872	440 aa		13.74	□□□□□ -0.21
NCOR1-222	ENST00000582565	ERVK-9	P63128	1117 aa		13.74	□□□□□ -0.21
NCOR1-222	ENST00000582565	CC2D2B	Q6DHV5	1058 aa		13.74	□□□□□ -0.21
NCOR1-222	ENST00000582565	KLF16	Q9BXK1	252 aa	Predicted RBP	13.74	□□□□□ -0.21
NCOR1-222	ENST00000582565	ZFAND3	Q9H8U3	227 aa		13.74	□□□□□ -0.21
NCOR1-222	ENST00000582565	GPT	P24298	496 aa		13.73	□□□□□ -0.21
NCOR1-222	ENST00000582565	ALDH1B1	P30837	517 aa		13.73	□□□□□ -0.21
NCOR1-222	ENST00000582565	USP4	Q13107	963 aa		13.73	□□□□□ -0.21
NCOR1-222	ENST00000582565	SUSD4	Q5VX71	490 aa		13.73	□□□□□ -0.21
NCOR1-222	ENST00000582565	HACL1	Q9UJ83	578 aa		13.73	□□□□□ -0.21
NCOR1-222	ENST00000582565	RRP7A	Q9Y3A4	280 aa	Known RBP	13.73	□□□□□ -0.21
NCOR1-222	ENST00000582565	LTBP1	Q14766	1721 aa		13.73	□□□□□ -0.21
NCOR1-222	ENST00000582565	RNF123	Q5XPI4	1314 aa		13.72	□□□□□ -0.21
NCOR1-222	ENST00000582565	MYL6B	P14649	208 aa		13.72	□□□□□ -0.21
NCOR1-222	ENST00000582565	GTF2E1	P29083	439 aa	Predicted RBP	13.72	□□□□□ -0.21
NCOR1-222	ENST00000582565	HOXA10	P31260	410 aa	Predicted RBP	13.72	□□□□□ -0.21
NCOR1-222	ENST00000582565	EPHX2	P34913	555 aa		13.72	□□□□□ -0.21
NCOR1-222	ENST00000582565	NFE2L2	Q16236	605 aa		13.72	□□□□□ -0.21
NCOR1-222	ENST00000582565	EAPP	Q56P03	285 aa	Predicted RBP	13.72	□□□□□ -0.21
NCOR1-222	ENST00000582565	LRP10	Q7Z4F1	713 aa		13.72	□□□□□ -0.21
NCOR1-222	ENST00000582565	PNISR	Q8TF01	805 aa	Known RBP	13.72	□□□□□ -0.21
NCOR1-222	ENST00000582565	PSMD1	Q99460	953 aa		13.72	□□□□□ -0.21
NCOR1-222	ENST00000582565	FOXN1	O15353	648 aa		13.71	□□□□□ -0.21
NCOR1-222	ENST00000582565	LILRA1	O75019	489 aa		13.71	□□□□□ -0.21
NCOR1-222	ENST00000582565	VEGFB	P49765	207 aa		13.71	□□□□□ -0.21
NCOR1-222	ENST00000582565	ZNF34	Q8IZ26	560 aa		13.71	□□□□□ -0.21
NCOR1-222	ENST00000582565	NYX	Q9GZU5	481 aa		13.71	□□□□□ -0.21
NCOR1-222	ENST00000582565	NOD1	Q9Y239	953 aa		13.71	□□□□□ -0.21
NCOR1-222	ENST00000582565	RIC1	Q4ADV7	1423 aa		13.71	□□□□□ -0.22
NCOR1-222	ENST00000582565	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.71	□□□□□ -0.22
NCOR1-222	ENST00000582565	TMEM88B	A6NKF7	163 aa		13.7	□□□□□ -0.22
NCOR1-222	ENST00000582565	CAPN5	O15484	640 aa	Predicted RBP	13.7	□□□□□ -0.22
NCOR1-222	ENST00000582565	NTSR2	O95665	410 aa		13.7	□□□□□ -0.22
NCOR1-222	ENST00000582565	AVP	P01185	164 aa		13.7	□□□□□ -0.22
NCOR1-222	ENST00000582565	MAP1S	Q66K74	1059 aa	Predicted RBP	13.7	□□□□□ -0.22
NCOR1-222	ENST00000582565	GPC2	Q8N158	579 aa		13.7	□□□□□ -0.22
NCOR1-222	ENST00000582565	FMR1	Q06787	632 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
NCOR1-222	ENST00000582565	CBLB	Q13191	982 aa		13.69	□□□□□ -0.22
NCOR1-222	ENST00000582565	KIF6	Q6ZMV9	814 aa		13.69	□□□□□ -0.22
NCOR1-222	ENST00000582565	CNTROB	Q8N137	903 aa		13.69	□□□□□ -0.22
NCOR1-222	ENST00000582565	PROSER3	Q2NL68	480 aa		13.68	□□□□□ -0.22
NCOR1-222	ENST00000582565	PNMA8A	Q86V59	439 aa	Predicted RBP	13.68	□□□□□ -0.22
NCOR1-222	ENST00000582565	TRIM50	Q86XT4	487 aa		13.68	□□□□□ -0.22
NCOR1-222	ENST00000582565	CRAMP1	Q96RY5	1269 aa		13.68	□□□□□ -0.22
NCOR1-222	ENST00000582565	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.67	□□□□□ -0.22
NCOR1-222	ENST00000582565	TCERG1	O14776	1098 aa	Known RBP	13.67	□□□□□ -0.22
NCOR1-222	ENST00000582565	ANXA1	P04083	346 aa		13.67	□□□□□ -0.22
NCOR1-222	ENST00000582565	EPS15	P42566	896 aa		13.67	□□□□□ -0.22
NCOR1-222	ENST00000582565	SCNN1D	P51172	638 aa		13.67	□□□□□ -0.22
NCOR1-222	ENST00000582565	JDP2	Q8WYK2	163 aa		13.67	□□□□□ -0.22
NCOR1-222	ENST00000582565	RPGR	Q92834	1020 aa	Known RBP	13.67	□□□□□ -0.22
NCOR1-222	ENST00000582565	OSBPL3	Q9H4L5	887 aa		13.67	□□□□□ -0.22
NCOR1-222	ENST00000582565	VRTN	Q9H8Y1	702 aa		13.67	□□□□□ -0.22
NCOR1-222	ENST00000582565	GJA3	Q9Y6H8	435 aa		13.67	□□□□□ -0.22
NCOR1-222	ENST00000582565	ERBB4	Q15303	1308 aa		13.66	□□□□□ -0.22
NCOR1-222	ENST00000582565	RASSF10	A6NK89	507 aa		13.66	□□□□□ -0.22
NCOR1-222	ENST00000582565	ATP5J2-PTCD1	G3V325	749 aa		13.66	□□□□□ -0.22
NCOR1-222	ENST00000582565	ADD1	P35611	737 aa	Known RBP	13.66	□□□□□ -0.22
NCOR1-222	ENST00000582565	CTC1	Q2NKJ3	1217 aa		13.66	□□□□□ -0.22
NCOR1-222	ENST00000582565	CYP2U1	Q7Z449	544 aa		13.66	□□□□□ -0.22
NCOR1-222	ENST00000582565	PBXIP1	Q96AQ6	731 aa		13.66	□□□□□ -0.22
NCOR1-222	ENST00000582565	RBM17	Q96I25	401 aa	Known RBP	13.66	□□□□□ -0.22
NCOR1-222	ENST00000582565	LAMB2	P55268	1798 aa		13.66	□□□□□ -0.22
NCOR1-222	ENST00000582565	NEFM	P07197	916 aa		13.65	□□□□□ -0.22
NCOR1-222	ENST00000582565	ADH1A	P07327	375 aa		13.65	□□□□□ -0.22
NCOR1-222	ENST00000582565	EIF6	P56537	245 aa	Known RBP	13.65	□□□□□ -0.22
NCOR1-222	ENST00000582565	GTF2I	P78347	998 aa		13.65	□□□□□ -0.22
NCOR1-222	ENST00000582565	SLC10A5	Q5PT55	438 aa		13.65	□□□□□ -0.22
NCOR1-222	ENST00000582565		Q6ZVU0	165 aa		13.65	□□□□□ -0.22
NCOR1-222	ENST00000582565	LARGE2	Q8N3Y3	721 aa		13.65	□□□□□ -0.22
NCOR1-222	ENST00000582565	MEIOB	Q8N635	442 aa		13.65	□□□□□ -0.22
NCOR1-222	ENST00000582565	PRDM10	Q9NQV6	1147 aa		13.65	□□□□□ -0.22
NCOR1-222	ENST00000582565	TSPYL4	Q9UJ04	414 aa		13.65	□□□□□ -0.22
NCOR1-222	ENST00000582565	TAF1	P21675	1872 aa		13.64	□□□□□ -0.23
NCOR1-222	ENST00000582565	EIF2S2	P20042	333 aa	Known RBP	13.64	□□□□□ -0.23
NCOR1-222	ENST00000582565	DEFB115	Q30KQ5	88 aa		13.64	□□□□□ -0.23
NCOR1-222	ENST00000582565	PARP10	Q53GL7	1025 aa		13.64	□□□□□ -0.23
NCOR1-222	ENST00000582565	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
NCOR1-222	ENST00000582565	ATP6V0A2	Q9Y487	856 aa		13.64	□□□□□ -0.23
NCOR1-222	ENST00000582565	ABCC4	O15439	1325 aa		13.64	□□□□□ -0.23
NCOR1-222	ENST00000582565	MAPK8IP3	Q9UPT6	1336 aa		13.64	□□□□□ -0.23
NCOR1-222	ENST00000582565	ANKRD36C	Q5JPF3	1778 aa		13.63	□□□□□ -0.23
NCOR1-222	ENST00000582565	AXIN1	O15169	862 aa		13.63	□□□□□ -0.23
NCOR1-222	ENST00000582565	CTCF	P49711	727 aa	Predicted RBP	13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms