RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 LCORLQ8N3X6 602 aa11.47□□□□□ -0.57
RFFL-210ENST00000582308 RUFY2Q8WXA3 655 aa11.47□□□□□ -0.57
RFFL-210ENST00000582308 ZBED3Q96IU2 234 aaPredicted RBP11.47□□□□□ -0.57
RFFL-210ENST00000582308 L3MBTL3Q96JM7 780 aaPredicted RBP11.47□□□□□ -0.57
RFFL-210ENST00000582308 PRMT6Q96LA8 375 aaPredicted RBP11.47□□□□□ -0.57
RFFL-210ENST00000582308 STRBPQ96SI9 672 aaKnown RBP11.47□□□□□ -0.57
RFFL-210ENST00000582308 RIOK1Q9BRS2 568 aaKnown RBP11.47□□□□□ -0.57
RFFL-210ENST00000582308 ARMT1Q9H993 441 aa11.47□□□□□ -0.57
RFFL-210ENST00000582308 AATFQ9NY61 560 aaKnown RBP eCLIP11.47□□□□□ -0.57
RFFL-210ENST00000582308 CCDC171Q6TFL3 1326 aa11.46□□□□□ -0.57
RFFL-210ENST00000582308 RAD50Q92878 1312 aa11.46□□□□□ -0.57
RFFL-210ENST00000582308 SPDYE2BA6NHP3 402 aa11.46□□□□□ -0.57
RFFL-210ENST00000582308 GPAA1O43292 621 aa11.46□□□□□ -0.57
RFFL-210ENST00000582308 SEC24BO95487 1268 aa11.46□□□□□ -0.57
RFFL-210ENST00000582308 SPDYE6P0CI01 402 aa11.46□□□□□ -0.57
RFFL-210ENST00000582308 RBM5P52756 815 aaKnown RBP eCLIP11.46□□□□□ -0.57
RFFL-210ENST00000582308 RHBDL3P58872 404 aa11.46□□□□□ -0.57
RFFL-210ENST00000582308 DLGAP5Q15398 846 aa11.46□□□□□ -0.57
RFFL-210ENST00000582308 SAMD7Q7Z3H4 446 aa11.46□□□□□ -0.57
RFFL-210ENST00000582308 MTMR14Q8NCE2 650 aa11.46□□□□□ -0.57
RFFL-210ENST00000582308 SH3RF3Q8TEJ3 882 aaPredicted RBP11.46□□□□□ -0.57
RFFL-210ENST00000582308 AIDAQ96BJ3 306 aa11.46□□□□□ -0.57
RFFL-210ENST00000582308 MYOZ2Q9NPC6 264 aa11.46□□□□□ -0.57
RFFL-210ENST00000582308 POTECB2RU33 542 aa11.45□□□□□ -0.58
RFFL-210ENST00000582308 H7C1D1 291 aa11.45□□□□□ -0.58
RFFL-210ENST00000582308 FOXP2O15409 715 aa11.45□□□□□ -0.58
RFFL-210ENST00000582308 PRKAB2O43741 272 aa11.45□□□□□ -0.58
RFFL-210ENST00000582308 BAG3O95817 575 aa11.45□□□□□ -0.58
RFFL-210ENST00000582308 TBC1D10BQ4KMP7 808 aaPredicted RBP11.45□□□□□ -0.58
RFFL-210ENST00000582308 RBM26Q5T8P6 1007 aaKnown RBP11.45□□□□□ -0.58
RFFL-210ENST00000582308 VPS53Q5VIR6 699 aa11.45□□□□□ -0.58
RFFL-210ENST00000582308 CDC42EP5Q6NZY7 148 aa11.45□□□□□ -0.58
RFFL-210ENST00000582308 NOL10Q9BSC4 688 aaKnown RBP11.45□□□□□ -0.58
RFFL-210ENST00000582308 BACH2Q9BYV9 841 aa11.45□□□□□ -0.58
RFFL-210ENST00000582308 NAV1Q8NEY1 1877 aa11.44□□□□□ -0.58
RFFL-210ENST00000582308 WNT10BO00744 389 aa11.44□□□□□ -0.58
RFFL-210ENST00000582308 PLCG2P16885 1265 aa11.44□□□□□ -0.58
RFFL-210ENST00000582308 PTH1RQ03431 593 aa11.44□□□□□ -0.58
RFFL-210ENST00000582308 NBPF9Q3BBW0 867 aa11.44□□□□□ -0.58
RFFL-210ENST00000582308 TRPM4Q8TD43 1214 aa11.44□□□□□ -0.58
RFFL-210ENST00000582308 LSG1Q9H089 658 aaKnown RBP11.44□□□□□ -0.58
RFFL-210ENST00000582308 TDRD3Q9H7E2 651 aaKnown RBP11.44□□□□□ -0.58
RFFL-210ENST00000582308 USP40Q9NVE5 1235 aa11.44□□□□□ -0.58
RFFL-210ENST00000582308 ASTN2O75129 1339 aaPredicted RBP11.43□□□□□ -0.58
RFFL-210ENST00000582308 GSG1L2A8MUP6 293 aa11.43□□□□□ -0.58
RFFL-210ENST00000582308 WDHD1O75717 1129 aaPredicted RBP11.43□□□□□ -0.58
RFFL-210ENST00000582308 HSPD1P10809 573 aaKnown RBP11.43□□□□□ -0.58
RFFL-210ENST00000582308 LMOD1P29536 600 aaPredicted RBP11.43□□□□□ -0.58
RFFL-210ENST00000582308 HIRAP54198 1017 aaPredicted RBP11.43□□□□□ -0.58
RFFL-210ENST00000582308 MFAP1P55081 439 aaKnown RBP11.43□□□□□ -0.58
RFFL-210ENST00000582308 KIF4BQ2VIQ3 1234 aa11.43□□□□□ -0.58
RFFL-210ENST00000582308 CERS3Q8IU89 383 aa11.43□□□□□ -0.58
RFFL-210ENST00000582308 TEX11Q8IYF3 940 aa11.43□□□□□ -0.58
RFFL-210ENST00000582308 CRNKL1Q9BZJ0 848 aaKnown RBP11.43□□□□□ -0.58
RFFL-210ENST00000582308 ADARB2Q9NS39 739 aaKnown RBP11.43□□□□□ -0.58
RFFL-210ENST00000582308 ZNF70Q9UC06 446 aaPredicted RBP11.43□□□□□ -0.58
RFFL-210ENST00000582308 HACL1Q9UJ83 578 aa11.43□□□□□ -0.58
RFFL-210ENST00000582308 SLC4A4Q9Y6R1 1079 aa11.43□□□□□ -0.58
RFFL-210ENST00000582308 CLRN2A0PK11 232 aa11.42□□□□□ -0.58
RFFL-210ENST00000582308 PATL2C9JE40 543 aaKnown RBP11.42□□□□□ -0.58
RFFL-210ENST00000582308 GNAT2P19087 354 aa11.42□□□□□ -0.58
RFFL-210ENST00000582308 EPHX2P34913 555 aa11.42□□□□□ -0.58
RFFL-210ENST00000582308 CACNB3P54284 484 aa11.42□□□□□ -0.58
RFFL-210ENST00000582308 SPDYE2Q495Y8 402 aa11.42□□□□□ -0.58
RFFL-210ENST00000582308 KIAA1211Q6ZU35 1233 aa11.42□□□□□ -0.58
RFFL-210ENST00000582308 TGFBRAP1Q8WUH2 860 aa11.42□□□□□ -0.58
RFFL-210ENST00000582308 SDR42E1Q8WUS8 393 aa11.42□□□□□ -0.58
RFFL-210ENST00000582308 MAP4K1Q92918 833 aa11.42□□□□□ -0.58
RFFL-210ENST00000582308 DSCC1Q9BVC3 393 aa11.42□□□□□ -0.58
RFFL-210ENST00000582308 TAF1DQ9H5J8 278 aaPredicted RBP11.42□□□□□ -0.58
RFFL-210ENST00000582308 EPB41L4AQ9HCS5 686 aaPredicted RBP11.42□□□□□ -0.58
RFFL-210ENST00000582308 ANO2Q9NQ90 1003 aa11.42□□□□□ -0.58
RFFL-210ENST00000582308 MKRN1Q9UHC7 482 aaKnown RBP11.42□□□□□ -0.58
RFFL-210ENST00000582308 DDX60LQ5H9U9 1706 aaKnown RBP11.42□□□□□ -0.58
RFFL-210ENST00000582308 LAMA4Q16363 1823 aa11.42□□□□□ -0.58
RFFL-210ENST00000582308 REC8O95072 547 aa11.41□□□□□ -0.58
RFFL-210ENST00000582308 APPP05067 770 aa11.41□□□□□ -0.58
RFFL-210ENST00000582308 NFIAQ12857 509 aa11.41□□□□□ -0.58
RFFL-210ENST00000582308 ALX1Q15699 326 aa11.41□□□□□ -0.58
RFFL-210ENST00000582308 ZFPM1Q8IX07 1006 aa11.41□□□□□ -0.58
RFFL-210ENST00000582308 IFNL3Q8IZI9 196 aa11.41□□□□□ -0.58
RFFL-210ENST00000582308 USP26Q9BXU7 913 aa11.41□□□□□ -0.58
RFFL-210ENST00000582308 RRAGCQ9HB90 399 aa11.41□□□□□ -0.58
RFFL-210ENST00000582308 DCP1AQ9NPI6 582 aaPredicted RBP11.41□□□□□ -0.58
RFFL-210ENST00000582308 DDX4Q9NQI0 724 aaKnown RBP11.41□□□□□ -0.58
RFFL-210ENST00000582308 FAM198AQ9UFP1 575 aa11.41□□□□□ -0.58
RFFL-210ENST00000582308 LAMB1P07942 1786 aa11.41□□□□□ -0.58
RFFL-210ENST00000582308 RPAP1Q9BWH6 1393 aaPredicted RBP11.41□□□□□ -0.58
RFFL-210ENST00000582308 IQCA1LA6NCM1 817 aa11.4□□□□□ -0.58
RFFL-210ENST00000582308 MYO1BO43795 1136 aa11.4□□□□□ -0.58
RFFL-210ENST00000582308 NPM3O75607 178 aaKnown RBP11.4□□□□□ -0.58
RFFL-210ENST00000582308 FGAP02671 866 aa11.4□□□□□ -0.58
RFFL-210ENST00000582308 USP5P45974 858 aa11.4□□□□□ -0.58
RFFL-210ENST00000582308 FKBP1CQ5VVH2 108 aa11.4□□□□□ -0.58
RFFL-210ENST00000582308 GIMAP6Q6P9H5 292 aa11.4□□□□□ -0.58
RFFL-210ENST00000582308 USP50Q70EL3 339 aaPredicted RBP11.4□□□□□ -0.58
RFFL-210ENST00000582308 MAPKAPK5Q8IW41 473 aa11.4□□□□□ -0.58
RFFL-210ENST00000582308 IDI2Q9BXS1 227 aa11.4□□□□□ -0.58
RFFL-210ENST00000582308 ATP8A2Q9NTI2 1148 aa11.4□□□□□ -0.58
RFFL-210ENST00000582308 CNTNAP1P78357 1384 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms