RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 BTDP43251 543 aa18.27■□□□□ 0.52
MKS1-210ENST00000581180 RGS3P49796 1198 aa18.27■□□□□ 0.52
MKS1-210ENST00000581180 PPP4CP60510 307 aa18.27■□□□□ 0.52
MKS1-210ENST00000581180 ZSCAN25Q6NSZ9 544 aa18.27■□□□□ 0.52
MKS1-210ENST00000581180 CDC42EP5Q6NZY7 148 aa18.27■□□□□ 0.52
MKS1-210ENST00000581180 CNTROBQ8N137 903 aa18.27■□□□□ 0.52
MKS1-210ENST00000581180 FSD1Q9BTV5 496 aa18.27■□□□□ 0.52
MKS1-210ENST00000581180 GGA3Q9NZ52 723 aa18.27■□□□□ 0.52
MKS1-210ENST00000581180 ZNF70Q9UC06 446 aaPredicted RBP18.27■□□□□ 0.52
MKS1-210ENST00000581180 RFX7Q2KHR2 1363 aa18.27■□□□□ 0.51
MKS1-210ENST00000581180 PITPNM2Q9BZ72 1349 aa18.26■□□□□ 0.51
MKS1-210ENST00000581180 TRIM6-TRIM34B2RNG4 842 aa18.26■□□□□ 0.51
MKS1-210ENST00000581180 RNF113AO15541 343 aaKnown RBP18.26■□□□□ 0.51
MKS1-210ENST00000581180 ZFYP08048 801 aaPredicted RBP18.26■□□□□ 0.51
MKS1-210ENST00000581180 RHBDL3P58872 404 aa18.26■□□□□ 0.51
MKS1-210ENST00000581180 ANGEL2Q5VTE6 544 aaKnown RBP18.26■□□□□ 0.51
MKS1-210ENST00000581180 TICAM2Q86XR7 235 aa18.26■□□□□ 0.51
MKS1-210ENST00000581180 CLEC11AQ9Y240 323 aa18.26■□□□□ 0.51
MKS1-210ENST00000581180 TRPM7Q96QT4 1865 aa18.26■□□□□ 0.51
MKS1-210ENST00000581180 CLRN2A0PK11 232 aa18.25■□□□□ 0.51
MKS1-210ENST00000581180 MYO1BO43795 1136 aa18.25■□□□□ 0.51
MKS1-210ENST00000581180 TOMM70O94826 608 aa18.25■□□□□ 0.51
MKS1-210ENST00000581180 SDSP20132 328 aa18.25■□□□□ 0.51
MKS1-210ENST00000581180 CHADLQ6NUI6 762 aa18.25■□□□□ 0.51
MKS1-210ENST00000581180 RBM46Q8TBY0 533 aaKnown RBP18.25■□□□□ 0.51
MKS1-210ENST00000581180 RILPL2Q969X0 211 aa18.25■□□□□ 0.51
MKS1-210ENST00000581180 USP40Q9NVE5 1235 aa18.25■□□□□ 0.51
MKS1-210ENST00000581180 AATFQ9NY61 560 aaKnown RBP eCLIP18.25■□□□□ 0.51
MKS1-210ENST00000581180 MYH1P12882 1939 aa18.25■□□□□ 0.51
MKS1-210ENST00000581180 DYNLL1P63167 89 aaKnown RBP18.24■□□□□ 0.51
MKS1-210ENST00000581180 LRRFIP1Q32MZ4 808 aaKnown RBP18.24■□□□□ 0.51
MKS1-210ENST00000581180 FKBP1CQ5VVH2 108 aa18.24■□□□□ 0.51
MKS1-210ENST00000581180 MAP1SQ66K74 1059 aaPredicted RBP18.24■□□□□ 0.51
MKS1-210ENST00000581180 APPBP2Q92624 585 aa18.24■□□□□ 0.51
MKS1-210ENST00000581180 RIOK1Q9BRS2 568 aaKnown RBP18.24■□□□□ 0.51
MKS1-210ENST00000581180 BAG3O95817 575 aa18.23■□□□□ 0.51
MKS1-210ENST00000581180 BMP2KLQ5H9B9 411 aa18.23■□□□□ 0.51
MKS1-210ENST00000581180 ZMYM1Q5SVZ6 1142 aa18.23■□□□□ 0.51
MKS1-210ENST00000581180 APOBEC3FQ8IUX4 373 aaKnown RBP18.23■□□□□ 0.51
MKS1-210ENST00000581180 MIGA1Q8NAN2 632 aa18.23■□□□□ 0.51
MKS1-210ENST00000581180 OSBP2Q969R2 916 aa18.23■□□□□ 0.51
MKS1-210ENST00000581180 DCPSQ96C86 337 aaKnown RBP18.23■□□□□ 0.51
MKS1-210ENST00000581180 PUS7LQ9H0K6 701 aaKnown RBP18.23■□□□□ 0.51
MKS1-210ENST00000581180 BAZ2AQ9UIF9 1905 aaKnown RBP18.23■□□□□ 0.51
MKS1-210ENST00000581180 WDHD1O75717 1129 aaPredicted RBP18.22■□□□□ 0.51
MKS1-210ENST00000581180 ITGBL1O95965 494 aaPredicted RBP18.22■□□□□ 0.51
MKS1-210ENST00000581180 PLCG2P16885 1265 aa18.22■□□□□ 0.51
MKS1-210ENST00000581180 CACNB3P54284 484 aa18.22■□□□□ 0.51
MKS1-210ENST00000581180 NFIAQ12857 509 aa18.22■□□□□ 0.51
MKS1-210ENST00000581180 SH3RF3Q8TEJ3 882 aaPredicted RBP18.22■□□□□ 0.51
MKS1-210ENST00000581180 NOL10Q9BSC4 688 aaKnown RBP18.22■□□□□ 0.51
MKS1-210ENST00000581180 IDI2Q9BXS1 227 aa18.22■□□□□ 0.51
MKS1-210ENST00000581180 VEZTQ9HBM0 779 aa18.22■□□□□ 0.51
MKS1-210ENST00000581180 SCAF8Q9UPN6 1271 aaKnown RBP18.22■□□□□ 0.51
MKS1-210ENST00000581180 CNTNAP1P78357 1384 aa18.21■□□□□ 0.51
MKS1-210ENST00000581180 MAGEB6P1A0A0J9YX57 407 aa18.21■□□□□ 0.51
MKS1-210ENST00000581180 CDC37L1Q7L3B6 337 aa18.21■□□□□ 0.51
MKS1-210ENST00000581180 KRT26Q7Z3Y9 468 aa18.21■□□□□ 0.51
MKS1-210ENST00000581180 CERS3Q8IU89 383 aa18.21■□□□□ 0.51
MKS1-210ENST00000581180 SMC1BQ8NDV3 1235 aa18.21■□□□□ 0.51
MKS1-210ENST00000581180 GLIS2Q9BZE0 524 aaPredicted RBP18.21■□□□□ 0.51
MKS1-210ENST00000581180 TMOD2Q9NZR1 351 aa18.21■□□□□ 0.51
MKS1-210ENST00000581180 FAM198AQ9UFP1 575 aa18.21■□□□□ 0.51
MKS1-210ENST00000581180 NAV1Q8NEY1 1877 aa18.2■□□□□ 0.5
MKS1-210ENST00000581180 TCP10L2B9ZVM9 353 aa18.2■□□□□ 0.5
MKS1-210ENST00000581180 ADM5C9JUS6 153 aa18.2■□□□□ 0.5
MKS1-210ENST00000581180 NPM3O75607 178 aaKnown RBP18.2■□□□□ 0.5
MKS1-210ENST00000581180 TNFAIP1Q13829 316 aa18.2■□□□□ 0.5
MKS1-210ENST00000581180 USP48Q86UV5 1035 aa18.2■□□□□ 0.5
MKS1-210ENST00000581180 FAM83AQ86UY5 434 aa18.2■□□□□ 0.5
MKS1-210ENST00000581180 SULF1Q8IWU6 871 aa18.2■□□□□ 0.5
MKS1-210ENST00000581180 TEX11Q8IYF3 940 aa18.2■□□□□ 0.5
MKS1-210ENST00000581180 LCORLQ8N3X6 602 aa18.2■□□□□ 0.5
MKS1-210ENST00000581180 DDX4Q9NQI0 724 aaKnown RBP18.2■□□□□ 0.5
MKS1-210ENST00000581180 DDX60LQ5H9U9 1706 aaKnown RBP18.2■□□□□ 0.5
MKS1-210ENST00000581180 M0R2C6 588 aa18.19■□□□□ 0.5
MKS1-210ENST00000581180 MBD4O95243 580 aa18.19■□□□□ 0.5
MKS1-210ENST00000581180 FSTL1Q12841 308 aa18.19■□□□□ 0.5
MKS1-210ENST00000581180 DLK2Q6UY11 383 aa18.19■□□□□ 0.5
MKS1-210ENST00000581180 FAM227BQ96M60 508 aa18.19■□□□□ 0.5
MKS1-210ENST00000581180 SEC62Q99442 399 aaKnown RBP18.19■□□□□ 0.5
MKS1-210ENST00000581180 DEFB129Q9H1M3 183 aa18.19■□□□□ 0.5
MKS1-210ENST00000581180 ARMT1Q9H993 441 aa18.19■□□□□ 0.5
MKS1-210ENST00000581180 HELLSQ9NRZ9 838 aa18.19■□□□□ 0.5
MKS1-210ENST00000581180 A0A0D9SFI3 127 aa18.18■□□□□ 0.5
MKS1-210ENST00000581180 HIP1O00291 1037 aa18.18■□□□□ 0.5
MKS1-210ENST00000581180 ENTPD3O75355 529 aa18.18■□□□□ 0.5
MKS1-210ENST00000581180 NMIQ13287 307 aaPredicted RBP18.18■□□□□ 0.5
MKS1-210ENST00000581180 RASA3Q14644 834 aa18.18■□□□□ 0.5
MKS1-210ENST00000581180 AIDAQ96BJ3 306 aa18.18■□□□□ 0.5
MKS1-210ENST00000581180 TEPSINQ96N21 525 aa18.18■□□□□ 0.5
MKS1-210ENST00000581180 STRBPQ96SI9 672 aaKnown RBP18.18■□□□□ 0.5
MKS1-210ENST00000581180 PPP2R3BQ9Y5P8 575 aa18.18■□□□□ 0.5
MKS1-210ENST00000581180 SIPA1L1O43166 1804 aa18.18■□□□□ 0.5
MKS1-210ENST00000581180 PASKQ96RG2 1323 aa18.18■□□□□ 0.5
MKS1-210ENST00000581180 RPAP1Q9BWH6 1393 aaPredicted RBP18.17■□□□□ 0.5
MKS1-210ENST00000581180 TRAF5O00463 557 aa18.17■□□□□ 0.5
MKS1-210ENST00000581180 GPAA1O43292 621 aa18.17■□□□□ 0.5
MKS1-210ENST00000581180 TNNI2P48788 182 aa18.17■□□□□ 0.5
MKS1-210ENST00000581180 FMR1Q06787 632 aaKnown RBP eCLIP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms