RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 AFDNP55196 1824 aaKnown RBP8.87□□□□□ -0.99
RNF43-204ENST00000580014 KDM2BQ8NHM5 1336 aa8.87□□□□□ -0.99
RNF43-204ENST00000580014 LAMB2P55268 1798 aa8.87□□□□□ -0.99
RNF43-204ENST00000580014 SRGAP3O43295 1099 aa8.87□□□□□ -0.99
RNF43-204ENST00000580014 HMMRO75330 724 aa8.87□□□□□ -0.99
RNF43-204ENST00000580014 IGHDP01880 384 aa8.87□□□□□ -0.99
RNF43-204ENST00000580014 TGFB2P61812 414 aa8.87□□□□□ -0.99
RNF43-204ENST00000580014 POTEGQ6S5H5 508 aa8.87□□□□□ -0.99
RNF43-204ENST00000580014 SMC5Q8IY18 1101 aa8.87□□□□□ -0.99
RNF43-204ENST00000580014 CCDC24Q8N4L8 307 aa8.87□□□□□ -0.99
RNF43-204ENST00000580014 KCTD17Q8N5Z5 321 aa8.87□□□□□ -0.99
RNF43-204ENST00000580014 OCSTAMPQ9BR26 566 aa8.87□□□□□ -0.99
RNF43-204ENST00000580014 RWDD1Q9H446 243 aaPredicted RBP8.87□□□□□ -0.99
RNF43-204ENST00000580014 GREM2Q9H772 168 aa8.87□□□□□ -0.99
RNF43-204ENST00000580014 DDX60Q8IY21 1712 aaKnown RBP8.86□□□□□ -0.99
RNF43-204ENST00000580014 CIAO1O76071 339 aa8.86□□□□□ -0.99
RNF43-204ENST00000580014 NPR1P16066 1061 aa8.86□□□□□ -0.99
RNF43-204ENST00000580014 KCNA3P22001 575 aa8.86□□□□□ -0.99
RNF43-204ENST00000580014 ITGA6P23229 1130 aa8.86□□□□□ -0.99
RNF43-204ENST00000580014 IFIT5Q13325 482 aaKnown RBP8.86□□□□□ -0.99
RNF43-204ENST00000580014 PTCRAQ6ISU1 281 aaPredicted RBP8.86□□□□□ -0.99
RNF43-204ENST00000580014 STYK1Q6J9G0 422 aa8.86□□□□□ -0.99
RNF43-204ENST00000580014 PCDH10Q9P2E7 1040 aa8.86□□□□□ -0.99
RNF43-204ENST00000580014 USTQ9Y2C2 406 aa8.86□□□□□ -0.99
RNF43-204ENST00000580014 TNRC6CQ9HCJ0 1690 aaKnown RBP8.85□□□□□ -0.99
RNF43-204ENST00000580014 LRP5O75197 1615 aa8.85□□□□□ -0.99
RNF43-204ENST00000580014 ANKRD18BA2A2Z9 1011 aa8.85□□□□□ -0.99
RNF43-204ENST00000580014 PIK3CDO00329 1044 aa8.85□□□□□ -0.99
RNF43-204ENST00000580014 BBOX1O75936 387 aa8.85□□□□□ -0.99
RNF43-204ENST00000580014 ATG7O95352 703 aa8.85□□□□□ -0.99
RNF43-204ENST00000580014 RPS8P62241 208 aaKnown RBP8.85□□□□□ -0.99
RNF43-204ENST00000580014 GRAPQ13588 217 aa8.85□□□□□ -0.99
RNF43-204ENST00000580014 CCDC57Q2TAC2 916 aa8.85□□□□□ -0.99
RNF43-204ENST00000580014 SH3BP5LQ7L8J4 393 aa8.85□□□□□ -0.99
RNF43-204ENST00000580014 ATG9AQ7Z3C6 839 aa8.85□□□□□ -0.99
RNF43-204ENST00000580014 GRAPLQ8TC17 118 aaPredicted RBP8.85□□□□□ -0.99
RNF43-204ENST00000580014 MASTLQ96GX5 879 aa8.85□□□□□ -0.99
RNF43-204ENST00000580014 CDC5LQ99459 802 aaKnown RBP8.85□□□□□ -0.99
RNF43-204ENST00000580014 ARHGAP9Q9BRR9 750 aa8.85□□□□□ -0.99
RNF43-204ENST00000580014 SEC31BQ9NQW1 1179 aa8.85□□□□□ -0.99
RNF43-204ENST00000580014 BSDC1Q9NW68 430 aaPredicted RBP8.85□□□□□ -0.99
RNF43-204ENST00000580014 RIPOR2Q9Y4F9 1068 aa8.85□□□□□ -0.99
RNF43-204ENST00000580014 KIF13BQ9NQT8 1826 aa8.84□□□□□ -0.99
RNF43-204ENST00000580014 H0YIN7 160 aa8.84□□□□□ -0.99
RNF43-204ENST00000580014 EYA2O00167 538 aa8.84□□□□□ -0.99
RNF43-204ENST00000580014 NPHP1O15259 732 aa8.84□□□□□ -0.99
RNF43-204ENST00000580014 RAB11FIP3O75154 756 aa8.84□□□□□ -0.99
RNF43-204ENST00000580014 ALDH1B1P30837 517 aa8.84□□□□□ -0.99
RNF43-204ENST00000580014 HSP90AB4PQ58FF6 505 aa8.84□□□□□ -0.99
RNF43-204ENST00000580014 DDX46Q7L014 1031 aaKnown RBP8.84□□□□□ -0.99
RNF43-204ENST00000580014 TMC4Q7Z404 712 aa8.84□□□□□ -0.99
RNF43-204ENST00000580014 C2CD5Q86YS7 1000 aa8.84□□□□□ -0.99
RNF43-204ENST00000580014 ANKRD31Q8N7Z5 1873 aa8.84□□□□□ -0.99
RNF43-204ENST00000580014 C7orf43Q8WVR3 580 aa8.84□□□□□ -0.99
RNF43-204ENST00000580014 CELF1Q92879 486 aaKnown RBP8.84□□□□□ -0.99
RNF43-204ENST00000580014 GCC1Q96CN9 775 aa8.84□□□□□ -0.99
RNF43-204ENST00000580014 RBM17Q96I25 401 aaKnown RBP8.84□□□□□ -0.99
RNF43-204ENST00000580014 CEP126Q9P2H0 1117 aa8.84□□□□□ -0.99
RNF43-204ENST00000580014 PCDHB9Q9Y5E1 797 aa8.84□□□□□ -0.99
RNF43-204ENST00000580014 SASH1O94885 1247 aa8.83□□□□□ -1
RNF43-204ENST00000580014 S1PR4O95977 384 aa8.83□□□□□ -1
RNF43-204ENST00000580014 SKIP12755 728 aa8.83□□□□□ -1
RNF43-204ENST00000580014 IL15P40933 162 aaPredicted RBP8.83□□□□□ -1
RNF43-204ENST00000580014 CENPQQ7L2Z9 268 aaPredicted RBP8.83□□□□□ -1
RNF43-204ENST00000580014 ANKRD18AQ8IVF6 992 aa8.83□□□□□ -1
RNF43-204ENST00000580014 PLEKHM2Q8IWE5 1019 aa8.83□□□□□ -1
RNF43-204ENST00000580014 VGLL2Q8N8G2 317 aa8.83□□□□□ -1
RNF43-204ENST00000580014 NKX2-3Q8TAU0 364 aa8.83□□□□□ -1
RNF43-204ENST00000580014 ADAM32Q8TC27 787 aa8.83□□□□□ -1
RNF43-204ENST00000580014 RPGRQ92834 1020 aaKnown RBP8.83□□□□□ -1
RNF43-204ENST00000580014 CNKSR1Q969H4 720 aa8.83□□□□□ -1
RNF43-204ENST00000580014 ZNF594Q96JF6 807 aaPredicted RBP8.83□□□□□ -1
RNF43-204ENST00000580014 PUS3Q9BZE2 481 aaKnown RBP8.83□□□□□ -1
RNF43-204ENST00000580014 GPR108Q9NPR9 543 aa8.83□□□□□ -1
RNF43-204ENST00000580014 PA2G4Q9UQ80 394 aaKnown RBP8.83□□□□□ -1
RNF43-204ENST00000580014 COL4A1P02462 1669 aa8.82□□□□□ -1
RNF43-204ENST00000580014 SURF6O75683 361 aaKnown RBP8.82□□□□□ -1
RNF43-204ENST00000580014 DPEP1P16444 411 aa8.82□□□□□ -1
RNF43-204ENST00000580014 CHRNA5P30532 468 aa8.82□□□□□ -1
RNF43-204ENST00000580014 IGHMBP2P38935 993 aaKnown RBP8.82□□□□□ -1
RNF43-204ENST00000580014 LRRC24Q50LG9 513 aa8.82□□□□□ -1
RNF43-204ENST00000580014 LDHAL6AQ6ZMR3 332 aa8.82□□□□□ -1
RNF43-204ENST00000580014 ERC1Q8IUD2 1116 aa8.82□□□□□ -1
RNF43-204ENST00000580014 SP8Q8IXZ3 490 aa8.82□□□□□ -1
RNF43-204ENST00000580014 KLHDC4Q8TBB5 520 aa8.82□□□□□ -1
RNF43-204ENST00000580014 FAM174AQ8TBP5 190 aa8.82□□□□□ -1
RNF43-204ENST00000580014 CCDC136Q96JN2 1154 aa8.82□□□□□ -1
RNF43-204ENST00000580014 CCDC85AQ96PX6 553 aaPredicted RBP8.82□□□□□ -1
RNF43-204ENST00000580014 VRTNQ9H8Y1 702 aa8.82□□□□□ -1
RNF43-204ENST00000580014 MINPP1Q9UNW1 487 aa8.82□□□□□ -1
RNF43-204ENST00000580014 CHMP3Q9Y3E7 222 aa8.82□□□□□ -1
RNF43-204ENST00000580014 ATP6V0A2Q9Y487 856 aa8.82□□□□□ -1
RNF43-204ENST00000580014 KIAA1551Q9HCM1 1747 aa8.82□□□□□ -1
RNF43-204ENST00000580014 MROH5Q6ZUA9 1318 aa8.81□□□□□ -1
RNF43-204ENST00000580014 SNED1Q8TER0 1413 aa8.81□□□□□ -1
RNF43-204ENST00000580014 A0A0G2JLW4 131 aa8.81□□□□□ -1
RNF43-204ENST00000580014 USP17L3A6NCW0 530 aa8.81□□□□□ -1
RNF43-204ENST00000580014 USP17L4A6NCW7 530 aa8.81□□□□□ -1
RNF43-204ENST00000580014 USP17L5A8MUK1 530 aa8.81□□□□□ -1
RNF43-204ENST00000580014 FGFR2P21802 821 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms