RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 CYP7A1P22680 504 aa27.56■■■□□ 2
NDEL1-207ENST00000580012 FKBP1CQ5VVH2 108 aa27.56■■■□□ 2
NDEL1-207ENST00000580012 USP48Q86UV5 1035 aa27.56■■■□□ 2
NDEL1-207ENST00000580012 MAP4K4O95819 1239 aaPredicted RBP27.55■■■□□ 2
NDEL1-207ENST00000580012 ADD2P35612 726 aa27.55■■■□□ 2
NDEL1-207ENST00000580012 BTDP43251 543 aa27.55■■■□□ 2
NDEL1-207ENST00000580012 RHBDL3P58872 404 aa27.55■■■□□ 2
NDEL1-207ENST00000580012 KRT26Q7Z3Y9 468 aa27.55■■■□□ 2
NDEL1-207ENST00000580012 APOBEC3FQ8IUX4 373 aaKnown RBP27.55■■■□□ 2
NDEL1-207ENST00000580012 GLIS2Q9BZE0 524 aaPredicted RBP27.55■■■□□ 2
NDEL1-207ENST00000580012 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.55■■■□□ 2
NDEL1-207ENST00000580012 USP40Q9NVE5 1235 aa27.55■■■□□ 2
NDEL1-207ENST00000580012 UBE3CQ15386 1083 aa27.54■■■□□ 2
NDEL1-207ENST00000580012 IFFO2Q5TF58 517 aa27.54■■■□□ 2
NDEL1-207ENST00000580012 SULF1Q8IWU6 871 aa27.54■■■□□ 2
NDEL1-207ENST00000580012 DNAJC5GQ8N7S2 189 aa27.54■■■□□ 2
NDEL1-207ENST00000580012 EVI5LQ96CN4 794 aa27.54■■■□□ 2
NDEL1-207ENST00000580012 PASKQ96RG2 1323 aa27.54■■■□□ 2
NDEL1-207ENST00000580012 TICAM2Q86XR7 235 aa27.53■■■□□ 2
NDEL1-207ENST00000580012 ZNF532Q9HCE3 1301 aa27.52■■■□□ 2
NDEL1-207ENST00000580012 ZSCAN25Q6NSZ9 544 aa27.52■■■□□ 2
NDEL1-207ENST00000580012 IDI2Q9BXS1 227 aa27.52■■■□□ 2
NDEL1-207ENST00000580012 ADM5C9JUS6 153 aa27.51■■□□□ 1.99
NDEL1-207ENST00000580012 BAG3O95817 575 aa27.51■■□□□ 1.99
NDEL1-207ENST00000580012 CHGBP05060 677 aa27.51■■□□□ 1.99
NDEL1-207ENST00000580012 DLK2Q6UY11 383 aa27.51■■□□□ 1.99
NDEL1-207ENST00000580012 DEFB129Q9H1M3 183 aa27.51■■□□□ 1.99
NDEL1-207ENST00000580012 VEZTQ9HBM0 779 aa27.51■■□□□ 1.99
NDEL1-207ENST00000580012 SCAF8Q9UPN6 1271 aaKnown RBP27.51■■□□□ 1.99
NDEL1-207ENST00000580012 TRAF5O00463 557 aa27.5■■□□□ 1.99
NDEL1-207ENST00000580012 WDHD1O75717 1129 aaPredicted RBP27.5■■□□□ 1.99
NDEL1-207ENST00000580012 SLFNL1Q499Z3 407 aa27.5■■□□□ 1.99
NDEL1-207ENST00000580012 FAM83AQ86UY5 434 aa27.5■■□□□ 1.99
NDEL1-207ENST00000580012 PPP2R3BQ9Y5P8 575 aa27.5■■□□□ 1.99
NDEL1-207ENST00000580012 RNF113AO15541 343 aaKnown RBP27.49■■□□□ 1.99
NDEL1-207ENST00000580012 NPM3O75607 178 aaKnown RBP27.49■■□□□ 1.99
NDEL1-207ENST00000580012 ZFYP08048 801 aaPredicted RBP27.49■■□□□ 1.99
NDEL1-207ENST00000580012 CACNB3P54284 484 aa27.49■■□□□ 1.99
NDEL1-207ENST00000580012 TNFAIP1Q13829 316 aa27.49■■□□□ 1.99
NDEL1-207ENST00000580012 RASA3Q14644 834 aa27.49■■□□□ 1.99
NDEL1-207ENST00000580012 TTC22Q5TAA0 569 aa27.49■■□□□ 1.99
NDEL1-207ENST00000580012 RIOK1Q9BRS2 568 aaKnown RBP27.49■■□□□ 1.99
NDEL1-207ENST00000580012 AATFQ9NY61 560 aaKnown RBP eCLIP27.49■■□□□ 1.99
NDEL1-207ENST00000580012 TMOD2Q9NZR1 351 aa27.49■■□□□ 1.99
NDEL1-207ENST00000580012 PLCG2P16885 1265 aa27.48■■□□□ 1.99
NDEL1-207ENST00000580012 HTRA3P83110 453 aa27.48■■□□□ 1.99
NDEL1-207ENST00000580012 FMR1Q06787 632 aaKnown RBP eCLIP27.48■■□□□ 1.99
NDEL1-207ENST00000580012 NFIAQ12857 509 aa27.48■■□□□ 1.99
NDEL1-207ENST00000580012 CERS3Q8IU89 383 aa27.48■■□□□ 1.99
NDEL1-207ENST00000580012 FAM198AQ9UFP1 575 aa27.48■■□□□ 1.99
NDEL1-207ENST00000580012 CNTNAP1P78357 1384 aa27.48■■□□□ 1.99
NDEL1-207ENST00000580012 RFX7Q2KHR2 1363 aa27.48■■□□□ 1.99
NDEL1-207ENST00000580012 TCP10L2B9ZVM9 353 aa27.47■■□□□ 1.99
NDEL1-207ENST00000580012 GSPT1P15170 499 aaKnown RBP27.47■■□□□ 1.99
NDEL1-207ENST00000580012 DYNLL1P63167 89 aaKnown RBP27.47■■□□□ 1.99
NDEL1-207ENST00000580012 LRRFIP1Q32MZ4 808 aaKnown RBP27.47■■□□□ 1.99
NDEL1-207ENST00000580012 SKAP1Q86WV1 359 aa27.47■■□□□ 1.99
NDEL1-207ENST00000580012 MIGA1Q8NAN2 632 aa27.47■■□□□ 1.99
NDEL1-207ENST00000580012 SH3RF3Q8TEJ3 882 aaPredicted RBP27.47■■□□□ 1.99
NDEL1-207ENST00000580012 NOL10Q9BSC4 688 aaKnown RBP27.47■■□□□ 1.99
NDEL1-207ENST00000580012 FSD1Q9BTV5 496 aa27.47■■□□□ 1.99
NDEL1-207ENST00000580012 ENTPD3O75355 529 aa27.46■■□□□ 1.99
NDEL1-207ENST00000580012 FAM151AQ8WW52 585 aa27.46■■□□□ 1.99
NDEL1-207ENST00000580012 CDCA5Q96FF9 252 aa27.46■■□□□ 1.99
NDEL1-207ENST00000580012 TEPSINQ96N21 525 aa27.46■■□□□ 1.99
NDEL1-207ENST00000580012 MAGEB6P1A0A0J9YX57 407 aa27.45■■□□□ 1.98
NDEL1-207ENST00000580012 TNNI2P48788 182 aa27.45■■□□□ 1.98
NDEL1-207ENST00000580012 CST9Q5W186 159 aa27.45■■□□□ 1.98
NDEL1-207ENST00000580012 DOCK2Q92608 1830 aa27.45■■□□□ 1.98
NDEL1-207ENST00000580012 TRIM6-TRIM34B2RNG4 842 aa27.44■■□□□ 1.98
NDEL1-207ENST00000580012 PRAMEF18Q5VWM3 479 aa27.44■■□□□ 1.98
NDEL1-207ENST00000580012 APPBP2Q92624 585 aa27.44■■□□□ 1.98
NDEL1-207ENST00000580012 OSBP2Q969R2 916 aa27.44■■□□□ 1.98
NDEL1-207ENST00000580012 PUS7LQ9H0K6 701 aaKnown RBP27.44■■□□□ 1.98
NDEL1-207ENST00000580012 DDX4Q9NQI0 724 aaKnown RBP27.44■■□□□ 1.98
NDEL1-207ENST00000580012 RGS3P49796 1198 aa27.43■■□□□ 1.98
NDEL1-207ENST00000580012 ZMYM1Q5SVZ6 1142 aa27.43■■□□□ 1.98
NDEL1-207ENST00000580012 ZFPM1Q8IX07 1006 aa27.43■■□□□ 1.98
NDEL1-207ENST00000580012 TEX11Q8IYF3 940 aa27.43■■□□□ 1.98
NDEL1-207ENST00000580012 MYH2Q9UKX2 1941 aa27.43■■□□□ 1.98
NDEL1-207ENST00000580012 RILPL2Q969X0 211 aa27.42■■□□□ 1.98
NDEL1-207ENST00000580012 KLRG1Q96E93 195 aa27.42■■□□□ 1.98
NDEL1-207ENST00000580012 TMEM39BQ9GZU3 492 aa27.42■■□□□ 1.98
NDEL1-207ENST00000580012 MYO5AQ9Y4I1 1855 aaKnown RBP27.42■■□□□ 1.98
NDEL1-207ENST00000580012 SDSP20132 328 aa27.41■■□□□ 1.98
NDEL1-207ENST00000580012 MAST2Q6P0Q8 1798 aa27.4■■□□□ 1.98
NDEL1-207ENST00000580012 TCP10Q12799 353 aa27.4■■□□□ 1.98
NDEL1-207ENST00000580012 NBPF12Q5TAG4 269 aaPredicted RBP27.4■■□□□ 1.98
NDEL1-207ENST00000580012 SH3BP5LQ7L8J4 393 aa27.4■■□□□ 1.98
NDEL1-207ENST00000580012 CDAN1Q8IWY9 1227 aa27.4■■□□□ 1.98
NDEL1-207ENST00000580012 LCORLQ8N3X6 602 aa27.4■■□□□ 1.98
NDEL1-207ENST00000580012 STRBPQ96SI9 672 aaKnown RBP27.4■■□□□ 1.98
NDEL1-207ENST00000580012 MKRN1Q9UHC7 482 aaKnown RBP27.4■■□□□ 1.98
NDEL1-207ENST00000580012 RPAP1Q9BWH6 1393 aaPredicted RBP27.39■■□□□ 1.98
NDEL1-207ENST00000580012 MBD4O95243 580 aa27.39■■□□□ 1.98
NDEL1-207ENST00000580012 CELF2O95319 508 aaKnown RBP27.39■■□□□ 1.98
NDEL1-207ENST00000580012 SUPT20HL1Q3ZLR7 823 aa27.39■■□□□ 1.98
NDEL1-207ENST00000580012 TGFBRAP1Q8WUH2 860 aa27.39■■□□□ 1.98
NDEL1-207ENST00000580012 ARMT1Q9H993 441 aa27.39■■□□□ 1.98
NDEL1-207ENST00000580012 OSBPL5Q9H0X9 879 aaPredicted RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms