RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 ANKRD45Q5TZF3 282 aa12.21□□□□□ -0.45
MKS1-208ENST00000579358 NAA16Q6N069 864 aaPredicted RBP12.21□□□□□ -0.45
MKS1-208ENST00000579358 DNAJC5GQ8N7S2 189 aa12.21□□□□□ -0.45
MKS1-208ENST00000579358 DNAJC2Q99543 621 aaKnown RBP12.21□□□□□ -0.45
MKS1-208ENST00000579358 IDI2Q9BXS1 227 aa12.21□□□□□ -0.45
MKS1-208ENST00000579358 BCL11AQ9H165 835 aa12.21□□□□□ -0.45
MKS1-208ENST00000579358 BOLA2Q9H3K6 86 aa12.21□□□□□ -0.45
MKS1-208ENST00000579358 ANTXR1Q9H6X2 564 aa12.21□□□□□ -0.45
MKS1-208ENST00000579358 NDUFB9Q9Y6M9 179 aa12.21□□□□□ -0.45
MKS1-208ENST00000579358 SALL3Q9BXA9 1300 aa12.2□□□□□ -0.46
MKS1-208ENST00000579358 TCP10L2B9ZVM9 353 aa12.2□□□□□ -0.46
MKS1-208ENST00000579358 IDH1O75874 414 aaKnown RBP12.2□□□□□ -0.46
MKS1-208ENST00000579358 DEFB115Q30KQ5 88 aa12.2□□□□□ -0.46
MKS1-208ENST00000579358 SUPT20HL1Q3ZLR7 823 aa12.2□□□□□ -0.46
MKS1-208ENST00000579358 PRAMEF18Q5VWM3 479 aa12.2□□□□□ -0.46
MKS1-208ENST00000579358 CERS3Q8IU89 383 aa12.2□□□□□ -0.46
MKS1-208ENST00000579358 KLRG1Q96E93 195 aa12.2□□□□□ -0.46
MKS1-208ENST00000579358 USP40Q9NVE5 1235 aa12.2□□□□□ -0.46
MKS1-208ENST00000579358 PAG1Q9NWQ8 432 aa12.2□□□□□ -0.46
MKS1-208ENST00000579358 MAST2Q6P0Q8 1798 aa12.2□□□□□ -0.46
MKS1-208ENST00000579358 PAPPA2Q9BXP8 1791 aa12.2□□□□□ -0.46
MKS1-208ENST00000579358 SSC5DA1L4H1 1573 aa12.19□□□□□ -0.46
MKS1-208ENST00000579358 ECM29Q5VYK3 1845 aa12.19□□□□□ -0.46
MKS1-208ENST00000579358 GOLIM4O00461 696 aa12.19□□□□□ -0.46
MKS1-208ENST00000579358 ERC2O15083 957 aa12.19□□□□□ -0.46
MKS1-208ENST00000579358 ENTPD3O75355 529 aa12.19□□□□□ -0.46
MKS1-208ENST00000579358 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
MKS1-208ENST00000579358 BAG3O95817 575 aa12.19□□□□□ -0.46
MKS1-208ENST00000579358 CENPBP07199 599 aaPredicted RBP12.19□□□□□ -0.46
MKS1-208ENST00000579358 MX1P20591 662 aa12.19□□□□□ -0.46
MKS1-208ENST00000579358 CACNB3P54284 484 aa12.19□□□□□ -0.46
MKS1-208ENST00000579358 RHBDL3P58872 404 aa12.19□□□□□ -0.46
MKS1-208ENST00000579358 MAP3K11Q16584 847 aa12.19□□□□□ -0.46
MKS1-208ENST00000579358 FAM151AQ8WW52 585 aa12.19□□□□□ -0.46
MKS1-208ENST00000579358 TEPSINQ96N21 525 aa12.19□□□□□ -0.46
MKS1-208ENST00000579358 NOL10Q9BSC4 688 aaKnown RBP12.19□□□□□ -0.46
MKS1-208ENST00000579358 AKAP11Q9UKA4 1901 aa12.19□□□□□ -0.46
MKS1-208ENST00000579358 WDHD1O75717 1129 aaPredicted RBP12.18□□□□□ -0.46
MKS1-208ENST00000579358 GLRX3O76003 335 aaKnown RBP12.18□□□□□ -0.46
MKS1-208ENST00000579358 PLCG2P16885 1265 aa12.18□□□□□ -0.46
MKS1-208ENST00000579358 CYP7A1P22680 504 aa12.18□□□□□ -0.46
MKS1-208ENST00000579358 ECE1P42892 770 aa12.18□□□□□ -0.46
MKS1-208ENST00000579358 HUNKP57058 714 aa12.18□□□□□ -0.46
MKS1-208ENST00000579358 PPP4CP60510 307 aa12.18□□□□□ -0.46
MKS1-208ENST00000579358 NUCB1Q02818 461 aa12.18□□□□□ -0.46
MKS1-208ENST00000579358 NFIAQ12857 509 aa12.18□□□□□ -0.46
MKS1-208ENST00000579358 NBPF12Q5TAG4 269 aaPredicted RBP12.18□□□□□ -0.46
MKS1-208ENST00000579358 ARMC9Q7Z3E5 817 aa12.18□□□□□ -0.46
MKS1-208ENST00000579358 MAGEB6Q8N7X4 407 aa12.18□□□□□ -0.46
MKS1-208ENST00000579358 PI4K2BQ8TCG2 481 aa12.18□□□□□ -0.46
MKS1-208ENST00000579358 HOOK2Q96ED9 719 aa12.18□□□□□ -0.46
MKS1-208ENST00000579358 TMEM39BQ9GZU3 492 aa12.18□□□□□ -0.46
MKS1-208ENST00000579358 FAM198AQ9UFP1 575 aa12.18□□□□□ -0.46
MKS1-208ENST00000579358 MKRN1Q9UHC7 482 aaKnown RBP12.18□□□□□ -0.46
MKS1-208ENST00000579358 TRPM7Q96QT4 1865 aa12.17□□□□□ -0.46
MKS1-208ENST00000579358 UNCXA6NJT0 531 aa12.17□□□□□ -0.46
MKS1-208ENST00000579358 PPP1R12BO60237 982 aaPredicted RBP12.17□□□□□ -0.46
MKS1-208ENST00000579358 SLC9C2Q5TAH2 1124 aa12.17□□□□□ -0.46
MKS1-208ENST00000579358 ADGRA1Q86SQ6 560 aa12.17□□□□□ -0.46
MKS1-208ENST00000579358 CHD1LQ86WJ1 897 aa12.17□□□□□ -0.46
MKS1-208ENST00000579358 JMYQ8N9B5 988 aa12.17□□□□□ -0.46
MKS1-208ENST00000579358 OTUD7AQ8TE49 926 aaPredicted RBP12.17□□□□□ -0.46
MKS1-208ENST00000579358 EDC3Q96F86 508 aaKnown RBP12.17□□□□□ -0.46
MKS1-208ENST00000579358 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.17□□□□□ -0.46
MKS1-208ENST00000579358 STAP2Q9UGK3 403 aa12.17□□□□□ -0.46
MKS1-208ENST00000579358 COL2A1P02458 1487 aaPredicted RBP12.16□□□□□ -0.46
MKS1-208ENST00000579358 PDE6AP16499 860 aa12.16□□□□□ -0.46
MKS1-208ENST00000579358 ADD2P35612 726 aa12.16□□□□□ -0.46
MKS1-208ENST00000579358 RGS3P49796 1198 aa12.16□□□□□ -0.46
MKS1-208ENST00000579358 TTLL12Q14166 644 aaPredicted RBP12.16□□□□□ -0.46
MKS1-208ENST00000579358 TSHZ3Q63HK5 1081 aa12.16□□□□□ -0.46
MKS1-208ENST00000579358 ZSCAN25Q6NSZ9 544 aa12.16□□□□□ -0.46
MKS1-208ENST00000579358 RGMBQ6NW40 437 aa12.16□□□□□ -0.46
MKS1-208ENST00000579358 CDAN1Q8IWY9 1227 aa12.16□□□□□ -0.46
MKS1-208ENST00000579358 LNPKQ9C0E8 428 aa12.16□□□□□ -0.46
MKS1-208ENST00000579358 AATFQ9NY61 560 aaKnown RBP eCLIP12.16□□□□□ -0.46
MKS1-208ENST00000579358 WDR33Q9C0J8 1336 aaKnown RBP12.15□□□□□ -0.46
MKS1-208ENST00000579358 TCRBV5S4A2TA0A5A2 114 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 IREB2P48200 963 aaKnown RBP12.15□□□□□ -0.46
MKS1-208ENST00000579358 VEGFBP49765 207 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 PDE1AP54750 535 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 TCP10Q12799 353 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 UBE3CQ15386 1083 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 LDLRAD1Q5T700 205 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 DCAF15Q66K64 600 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 B4GALNT3Q6L9W6 998 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 CYP4F22Q6NT55 531 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 TEX11Q8IYF3 940 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 KBTBD3Q8NAB2 608 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 SH3RF3Q8TEJ3 882 aaPredicted RBP12.15□□□□□ -0.46
MKS1-208ENST00000579358 CCDC102AQ96A19 550 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 CAPNS2Q96L46 248 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 DDX4Q9NQI0 724 aaKnown RBP12.15□□□□□ -0.46
MKS1-208ENST00000579358 ANGEL1Q9UNK9 670 aaKnown RBP12.15□□□□□ -0.46
MKS1-208ENST00000579358 DOCK2Q92608 1830 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 ATRNL1Q5VV63 1379 aa12.15□□□□□ -0.46
MKS1-208ENST00000579358 ZNF532Q9HCE3 1301 aa12.14□□□□□ -0.47
MKS1-208ENST00000579358 UBE2Q2LH0YL09 131 aa12.14□□□□□ -0.47
MKS1-208ENST00000579358 SLC10A3P09131 477 aa12.14□□□□□ -0.47
MKS1-208ENST00000579358 PICALMQ13492 652 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms