RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 MAP3K12Q12852 859 aa14.36□□□□□ -0.11
GGA3-206ENST00000578773 LRRC26Q2I0M4 334 aa14.36□□□□□ -0.11
GGA3-206ENST00000578773 PXYLP1Q8TE99 480 aa14.36□□□□□ -0.11
GGA3-206ENST00000578773 BABAM1Q9NWV8 329 aa14.36□□□□□ -0.11
GGA3-206ENST00000578773 TTF2Q9UNY4 1162 aaKnown RBP14.36□□□□□ -0.11
GGA3-206ENST00000578773 DOCK2Q92608 1830 aa14.36□□□□□ -0.11
GGA3-206ENST00000578773 MIGA2Q7L4E1 593 aa14.35□□□□□ -0.11
GGA3-206ENST00000578773 SYMPKQ92797 1274 aaKnown RBP14.35□□□□□ -0.11
GGA3-206ENST00000578773 KCNH4Q9UQ05 1017 aa14.35□□□□□ -0.11
GGA3-206ENST00000578773 TNPO2O14787 897 aaKnown RBP14.34□□□□□ -0.11
GGA3-206ENST00000578773 HSP90B1P14625 803 aaKnown RBP14.34□□□□□ -0.11
GGA3-206ENST00000578773 ITGA6P23229 1130 aa14.34□□□□□ -0.11
GGA3-206ENST00000578773 IGHMBP2P38935 993 aaKnown RBP14.34□□□□□ -0.11
GGA3-206ENST00000578773 CRKP46108 304 aa14.34□□□□□ -0.11
GGA3-206ENST00000578773 FKBP1AP62942 108 aaKnown RBP14.34□□□□□ -0.11
GGA3-206ENST00000578773 PPATQ06203 517 aa14.34□□□□□ -0.11
GGA3-206ENST00000578773 IRF5Q13568 498 aa14.34□□□□□ -0.11
GGA3-206ENST00000578773 DUSP27Q5VZP5 1158 aa14.34□□□□□ -0.11
GGA3-206ENST00000578773 ANKLE1Q8NAG6 615 aa14.34□□□□□ -0.11
GGA3-206ENST00000578773 METTL22Q9BUU2 404 aaPredicted RBP14.34□□□□□ -0.11
GGA3-206ENST00000578773 ANKRD2Q9GZV1 360 aa14.34□□□□□ -0.11
GGA3-206ENST00000578773 DOCK1Q14185 1865 aa14.33□□□□□ -0.11
GGA3-206ENST00000578773 TMPOP42166 694 aaKnown RBP14.33□□□□□ -0.12
GGA3-206ENST00000578773 CWF19L2Q2TBE0 894 aaKnown RBP14.33□□□□□ -0.12
GGA3-206ENST00000578773 TJAP1Q5JTD0 557 aa14.33□□□□□ -0.12
GGA3-206ENST00000578773 PARK7Q99497 189 aaKnown RBP14.33□□□□□ -0.12
GGA3-206ENST00000578773 MYH13Q9UKX3 1938 aa14.33□□□□□ -0.12
GGA3-206ENST00000578773 FOSL2P15408 326 aa14.32□□□□□ -0.12
GGA3-206ENST00000578773 MFSD14BQ5SR56 506 aa14.32□□□□□ -0.12
GGA3-206ENST00000578773 C9orf50Q5SZB4 431 aa14.32□□□□□ -0.12
GGA3-206ENST00000578773 C15orf52Q6ZUT6 534 aaKnown RBP14.32□□□□□ -0.12
GGA3-206ENST00000578773 SERPINA10Q9UK55 444 aa14.32□□□□□ -0.12
GGA3-206ENST00000578773 RLFQ13129 1914 aa14.31□□□□□ -0.12
GGA3-206ENST00000578773 NEUROD2Q15784 382 aa14.31□□□□□ -0.12
GGA3-206ENST00000578773 OGDHLQ9ULD0 1010 aa14.31□□□□□ -0.12
GGA3-206ENST00000578773 MAP3K2Q9Y2U5 619 aa14.31□□□□□ -0.12
GGA3-206ENST00000578773 MYO9BQ13459 2157 aa14.3□□□□□ -0.12
GGA3-206ENST00000578773 LOC285556D6RIA3 1793 aa14.3□□□□□ -0.12
GGA3-206ENST00000578773 COL6A1P12109 1028 aa14.3□□□□□ -0.12
GGA3-206ENST00000578773 TNNI2P48788 182 aa14.3□□□□□ -0.12
GGA3-206ENST00000578773 SHHQ15465 462 aa14.3□□□□□ -0.12
GGA3-206ENST00000578773 UBE3BQ7Z3V4 1068 aa14.3□□□□□ -0.12
GGA3-206ENST00000578773 ZNF804AQ7Z570 1209 aa14.3□□□□□ -0.12
GGA3-206ENST00000578773 MPHOSPH8Q99549 860 aa14.3□□□□□ -0.12
GGA3-206ENST00000578773 CHD9Q3L8U1 2897 aa14.3□□□□□ -0.12
GGA3-206ENST00000578773 ATAD5Q96QE3 1844 aa14.29□□□□□ -0.12
GGA3-206ENST00000578773 ELL2O00472 640 aaPredicted RBP14.29□□□□□ -0.12
GGA3-206ENST00000578773 HOXB7P09629 217 aa14.29□□□□□ -0.12
GGA3-206ENST00000578773 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.29□□□□□ -0.12
GGA3-206ENST00000578773 TRIM35Q9UPQ4 493 aa14.29□□□□□ -0.12
GGA3-206ENST00000578773 HMGCRP04035 888 aa14.28□□□□□ -0.12
GGA3-206ENST00000578773 SLURP2P0DP57 97 aa14.28□□□□□ -0.12
GGA3-206ENST00000578773 ANKRD13CQ8N6S4 541 aa14.28□□□□□ -0.12
GGA3-206ENST00000578773 TRIB2Q92519 343 aa14.28□□□□□ -0.12
GGA3-206ENST00000578773 ZNF341Q9BYN7 854 aa14.28□□□□□ -0.12
GGA3-206ENST00000578773 PLXNA1Q9UIW2 1896 aa14.27□□□□□ -0.12
GGA3-206ENST00000578773 CAPN2P17655 700 aa14.27□□□□□ -0.13
GGA3-206ENST00000578773 GYG1P46976 350 aa14.27□□□□□ -0.13
GGA3-206ENST00000578773 CASP7P55210 303 aa14.27□□□□□ -0.13
GGA3-206ENST00000578773 GADL1Q6ZQY3 521 aa14.27□□□□□ -0.13
GGA3-206ENST00000578773 CCDC146Q8IYE0 955 aa14.27□□□□□ -0.13
GGA3-206ENST00000578773 HMX1Q9NP08 348 aaPredicted RBP14.27□□□□□ -0.13
GGA3-206ENST00000578773 ZNF112Q9UJU3 913 aa14.27□□□□□ -0.13
GGA3-206ENST00000578773 IQSEC3Q9UPP2 1182 aaPredicted RBP14.27□□□□□ -0.13
GGA3-206ENST00000578773 XIRP2A4UGR9 3374 aa14.26□□□□□ -0.13
GGA3-206ENST00000578773 NEURL1BA8MQ27 555 aa14.26□□□□□ -0.13
GGA3-206ENST00000578773 H7C1W4 665 aa14.26□□□□□ -0.13
GGA3-206ENST00000578773 PLIN1O60240 522 aa14.26□□□□□ -0.13
GGA3-206ENST00000578773 CCDC84Q86UT8 332 aaPredicted RBP14.26□□□□□ -0.13
GGA3-206ENST00000578773 TDRD7Q8NHU6 1098 aaKnown RBP14.26□□□□□ -0.13
GGA3-206ENST00000578773 NECAB3Q96P71 396 aaPredicted RBP14.26□□□□□ -0.13
GGA3-206ENST00000578773 MBIPQ9NS73 344 aa14.26□□□□□ -0.13
GGA3-206ENST00000578773 GJD2Q9UKL4 321 aa14.26□□□□□ -0.13
GGA3-206ENST00000578773 GBF1Q92538 1859 aa14.25□□□□□ -0.13
GGA3-206ENST00000578773 RPAP1Q9BWH6 1393 aaPredicted RBP14.25□□□□□ -0.13
GGA3-206ENST00000578773 SYNGAP1Q96PV0 1343 aa14.25□□□□□ -0.13
GGA3-206ENST00000578773 A0A0G2JLL6 359 aaPredicted RBP14.25□□□□□ -0.13
GGA3-206ENST00000578773 PEX10O60683 326 aa14.25□□□□□ -0.13
GGA3-206ENST00000578773 CSF1RP07333 972 aa14.25□□□□□ -0.13
GGA3-206ENST00000578773 PRRT2Q7Z6L0 340 aaPredicted RBP14.25□□□□□ -0.13
GGA3-206ENST00000578773 ADAMTS19Q8TE59 1207 aa14.25□□□□□ -0.13
GGA3-206ENST00000578773 ZNF594Q96JF6 807 aaPredicted RBP14.25□□□□□ -0.13
GGA3-206ENST00000578773 PI4KAP2A4QPH2 592 aa14.24□□□□□ -0.13
GGA3-206ENST00000578773 GRIN2CQ14957 1233 aa14.24□□□□□ -0.13
GGA3-206ENST00000578773 NOL9Q5SY16 702 aaKnown RBP14.24□□□□□ -0.13
GGA3-206ENST00000578773 DCAF15Q66K64 600 aa14.24□□□□□ -0.13
GGA3-206ENST00000578773 APOBEC3HQ6NTF7 200 aaKnown RBP14.24□□□□□ -0.13
GGA3-206ENST00000578773 FAM83AQ86UY5 434 aa14.24□□□□□ -0.13
GGA3-206ENST00000578773 PI4KAP1Q8N8J0 262 aa14.24□□□□□ -0.13
GGA3-206ENST00000578773 PPM1EQ8WY54 764 aa14.24□□□□□ -0.13
GGA3-206ENST00000578773 COA7Q96BR5 231 aa14.24□□□□□ -0.13
GGA3-206ENST00000578773 CHD7Q9P2D1 2997 aa14.24□□□□□ -0.13
GGA3-206ENST00000578773 PIEZO1Q92508 2521 aa14.23□□□□□ -0.13
GGA3-206ENST00000578773 MUC6Q6W4X9 2439 aa14.23□□□□□ -0.13
GGA3-206ENST00000578773 PRKAR2AP13861 404 aaKnown RBP14.23□□□□□ -0.13
GGA3-206ENST00000578773 CCND3P30281 292 aaPredicted RBP14.23□□□□□ -0.13
GGA3-206ENST00000578773 TCP10Q12799 353 aa14.23□□□□□ -0.13
GGA3-206ENST00000578773 TRIM26Q12899 539 aaPredicted RBP14.23□□□□□ -0.13
GGA3-206ENST00000578773 CHAF1AQ13111 956 aaPredicted RBP14.23□□□□□ -0.13
GGA3-206ENST00000578773 TREML2Q5T2D2 321 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms