RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 RASA3Q14644 834 aa13.98□□□□□ -0.17
ERBB2-208ENST00000578630 LRRFIP1Q32MZ4 808 aaKnown RBP13.98□□□□□ -0.17
ERBB2-208ENST00000578630 SLC9C2Q5TAH2 1124 aa13.98□□□□□ -0.17
ERBB2-208ENST00000578630 ERICH6BQ5W0A0 696 aa13.98□□□□□ -0.17
ERBB2-208ENST00000578630 ZSCAN25Q6NSZ9 544 aa13.98□□□□□ -0.17
ERBB2-208ENST00000578630 CDC42EP5Q6NZY7 148 aa13.98□□□□□ -0.17
ERBB2-208ENST00000578630 MAGEB6Q8N7X4 407 aa13.98□□□□□ -0.17
ERBB2-208ENST00000578630 C2orf69Q8N8R5 385 aa13.98□□□□□ -0.17
ERBB2-208ENST00000578630 CREBZFQ9NS37 354 aa13.98□□□□□ -0.17
ERBB2-208ENST00000578630 STAP2Q9UGK3 403 aa13.98□□□□□ -0.17
ERBB2-208ENST00000578630 SCAF8Q9UPN6 1271 aaKnown RBP13.98□□□□□ -0.17
ERBB2-208ENST00000578630 PDE1AP54750 535 aa13.97□□□□□ -0.17
ERBB2-208ENST00000578630 PPP4CP60510 307 aa13.97□□□□□ -0.17
ERBB2-208ENST00000578630 CST9Q5W186 159 aa13.97□□□□□ -0.17
ERBB2-208ENST00000578630 FAM83AQ86UY5 434 aa13.97□□□□□ -0.17
ERBB2-208ENST00000578630 CERS3Q8IU89 383 aa13.97□□□□□ -0.17
ERBB2-208ENST00000578630 OTUD7AQ8TE49 926 aaPredicted RBP13.97□□□□□ -0.17
ERBB2-208ENST00000578630 CDCA5Q96FF9 252 aa13.97□□□□□ -0.17
ERBB2-208ENST00000578630 CCDC136Q96JN2 1154 aa13.97□□□□□ -0.17
ERBB2-208ENST00000578630 ADAMTSL1Q8N6G6 1762 aa13.96□□□□□ -0.17
ERBB2-208ENST00000578630 MYH13Q9UKX3 1938 aa13.96□□□□□ -0.17
ERBB2-208ENST00000578630 FMR1Q06787 632 aaKnown RBP eCLIP13.96□□□□□ -0.17
ERBB2-208ENST00000578630 PRAMEF18Q5VWM3 479 aa13.96□□□□□ -0.17
ERBB2-208ENST00000578630 ZNF384Q8TF68 577 aa13.96□□□□□ -0.17
ERBB2-208ENST00000578630 HOOK2Q96ED9 719 aa13.96□□□□□ -0.17
ERBB2-208ENST00000578630 POLR2AP24928 1970 aaKnown RBP13.96□□□□□ -0.18
ERBB2-208ENST00000578630 AOX1Q06278 1338 aa13.95□□□□□ -0.18
ERBB2-208ENST00000578630 ZNF646O15015 1829 aaPredicted RBP13.95□□□□□ -0.18
ERBB2-208ENST00000578630 PPP1R12BO60237 982 aaPredicted RBP13.95□□□□□ -0.18
ERBB2-208ENST00000578630 CACNB3P54284 484 aa13.95□□□□□ -0.18
ERBB2-208ENST00000578630 FKBP1BP68106 108 aa13.95□□□□□ -0.18
ERBB2-208ENST00000578630 TTLL12Q14166 644 aaPredicted RBP13.95□□□□□ -0.18
ERBB2-208ENST00000578630 TSHZ3Q63HK5 1081 aa13.95□□□□□ -0.18
ERBB2-208ENST00000578630 DLK2Q6UY11 383 aa13.95□□□□□ -0.18
ERBB2-208ENST00000578630 PI4K2BQ8TCG2 481 aa13.95□□□□□ -0.18
ERBB2-208ENST00000578630 FAM151AQ8WW52 585 aa13.95□□□□□ -0.18
ERBB2-208ENST00000578630 EDC3Q96F86 508 aaKnown RBP13.95□□□□□ -0.18
ERBB2-208ENST00000578630 IDI2Q9BXS1 227 aa13.95□□□□□ -0.18
ERBB2-208ENST00000578630 GBA2Q9HCG7 927 aaPredicted RBP13.95□□□□□ -0.18
ERBB2-208ENST00000578630 AATFQ9NY61 560 aaKnown RBP eCLIP13.95□□□□□ -0.18
ERBB2-208ENST00000578630 ABT1Q9ULW3 272 aaKnown RBP13.95□□□□□ -0.18
ERBB2-208ENST00000578630 SALL3Q9BXA9 1300 aa13.94□□□□□ -0.18
ERBB2-208ENST00000578630 ENTPD3O75355 529 aa13.94□□□□□ -0.18
ERBB2-208ENST00000578630 PDE6AP16499 860 aa13.94□□□□□ -0.18
ERBB2-208ENST00000578630 TCP10Q12799 353 aa13.94□□□□□ -0.18
ERBB2-208ENST00000578630 CENPQQ7L2Z9 268 aaPredicted RBP13.94□□□□□ -0.18
ERBB2-208ENST00000578630 ARMC9Q7Z3E5 817 aa13.94□□□□□ -0.18
ERBB2-208ENST00000578630 TEX11Q8IYF3 940 aa13.94□□□□□ -0.18
ERBB2-208ENST00000578630 KBTBD3Q8NAB2 608 aa13.94□□□□□ -0.18
ERBB2-208ENST00000578630 AKAP11Q9UKA4 1901 aa13.94□□□□□ -0.18
ERBB2-208ENST00000578630 ZNF532Q9HCE3 1301 aa13.93□□□□□ -0.18
ERBB2-208ENST00000578630 MAGEB6P1A0A0J9YX57 407 aa13.93□□□□□ -0.18
ERBB2-208ENST00000578630 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
ERBB2-208ENST00000578630 ZFYP08048 801 aaPredicted RBP13.93□□□□□ -0.18
ERBB2-208ENST00000578630 RHBDL3P58872 404 aa13.93□□□□□ -0.18
ERBB2-208ENST00000578630 UBE3CQ15386 1083 aa13.93□□□□□ -0.18
ERBB2-208ENST00000578630 DEFB115Q30KQ5 88 aa13.93□□□□□ -0.18
ERBB2-208ENST00000578630 PLEKHM2Q8IWE5 1019 aa13.93□□□□□ -0.18
ERBB2-208ENST00000578630 EVI5LQ96CN4 794 aa13.93□□□□□ -0.18
ERBB2-208ENST00000578630 OSBPL3Q9H4L5 887 aa13.93□□□□□ -0.18
ERBB2-208ENST00000578630 TRIM6-TRIM34B2RNG4 842 aa13.92□□□□□ -0.18
ERBB2-208ENST00000578630 ADD2P35612 726 aa13.92□□□□□ -0.18
ERBB2-208ENST00000578630 RGS3P49796 1198 aa13.92□□□□□ -0.18
ERBB2-208ENST00000578630 NFIAQ12857 509 aa13.92□□□□□ -0.18
ERBB2-208ENST00000578630 PICALMQ13492 652 aa13.92□□□□□ -0.18
ERBB2-208ENST00000578630 NBPF12Q5TAG4 269 aaPredicted RBP13.92□□□□□ -0.18
ERBB2-208ENST00000578630 TICAM2Q86XR7 235 aa13.92□□□□□ -0.18
ERBB2-208ENST00000578630 ZSCAN29Q8IWY8 852 aaPredicted RBP13.92□□□□□ -0.18
ERBB2-208ENST00000578630 MIGA1Q8NAN2 632 aa13.92□□□□□ -0.18
ERBB2-208ENST00000578630 SH3RF3Q8TEJ3 882 aaPredicted RBP13.92□□□□□ -0.18
ERBB2-208ENST00000578630 TMEM39BQ9GZU3 492 aa13.92□□□□□ -0.18
ERBB2-208ENST00000578630 FAM198AQ9UFP1 575 aa13.92□□□□□ -0.18
ERBB2-208ENST00000578630 TLL2Q9Y6L7 1015 aa13.92□□□□□ -0.18
ERBB2-208ENST00000578630 RNF113AO15541 343 aaKnown RBP13.91□□□□□ -0.18
ERBB2-208ENST00000578630 WDHD1O75717 1129 aaPredicted RBP13.91□□□□□ -0.18
ERBB2-208ENST00000578630 USP5P45974 858 aa13.91□□□□□ -0.18
ERBB2-208ENST00000578630 IREB2P48200 963 aaKnown RBP13.91□□□□□ -0.18
ERBB2-208ENST00000578630 HUNKP57058 714 aa13.91□□□□□ -0.18
ERBB2-208ENST00000578630 DYNLL1P63167 89 aaKnown RBP13.91□□□□□ -0.18
ERBB2-208ENST00000578630 DCAF15Q66K64 600 aa13.91□□□□□ -0.18
ERBB2-208ENST00000578630 ADGRA1Q86SQ6 560 aa13.91□□□□□ -0.18
ERBB2-208ENST00000578630 SAPCD2Q86UD0 394 aa13.91□□□□□ -0.18
ERBB2-208ENST00000578630 TGFBRAP1Q8WUH2 860 aa13.91□□□□□ -0.18
ERBB2-208ENST00000578630 HHIPL1Q96JK4 782 aa13.91□□□□□ -0.18
ERBB2-208ENST00000578630 FSD1Q9BTV5 496 aa13.91□□□□□ -0.18
ERBB2-208ENST00000578630 PPP4R2Q9NY27 417 aa13.91□□□□□ -0.18
ERBB2-208ENST00000578630 MYH2Q9UKX2 1941 aa13.91□□□□□ -0.18
ERBB2-208ENST00000578630 TCRBV5S4A2TA0A5A2 114 aa13.9□□□□□ -0.18
ERBB2-208ENST00000578630 UNCXA6NJT0 531 aa13.9□□□□□ -0.18
ERBB2-208ENST00000578630 ECE1P42892 770 aa13.9□□□□□ -0.18
ERBB2-208ENST00000578630 HTRA3P83110 453 aa13.9□□□□□ -0.18
ERBB2-208ENST00000578630 PRKG1Q13976 671 aa13.9□□□□□ -0.18
ERBB2-208ENST00000578630 PAXIP1Q6ZW49 1069 aaPredicted RBP13.9□□□□□ -0.18
ERBB2-208ENST00000578630 RILPL2Q969X0 211 aa13.9□□□□□ -0.18
ERBB2-208ENST00000578630 TEPSINQ96N21 525 aa13.9□□□□□ -0.18
ERBB2-208ENST00000578630 CRNKL1Q9BZJ0 848 aaKnown RBP13.9□□□□□ -0.18
ERBB2-208ENST00000578630 DHX36Q9H2U1 1008 aaKnown RBP13.9□□□□□ -0.18
ERBB2-208ENST00000578630 ANGEL1Q9UNK9 670 aaKnown RBP13.9□□□□□ -0.18
ERBB2-208ENST00000578630 CNTNAP1P78357 1384 aa13.89□□□□□ -0.19
ERBB2-208ENST00000578630 RASSF10A6NK89 507 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms